<Clone: Contig-U13205-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U13205-1

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Assembled

Chromosomal Location of Contig-U13205-1

< more Chromosomal info >

Chromosome Number 3
Length 6358359
Start Poin 671,849
End Point 672,742
Strand PLUS

Sequence Contig-U13205-1

TGTATAACAA CCGATTTTTG TGATCCACAA ATTTGTTNAG GTGACCCATT
AAATCTTAGC TGTATTAAAA ATATGTCAAT GTGTGATGAT GGAAATTATT
GCACAACGGA TATATGTTCT GGTAATGGAG TTTGCTCTCA CTCATCACCC
GATCCTTTAT GTAGATCATG TAAATCAACA AACTGTACAA CAACTGATTT
ATGTCAACTT CAAATATGTA GTGCGGATGG TAGTGGTTGT GAAACTGATC
AAAAGGGTCT TTGTGATGAT AAAGATCCAT GTACAACCGA TCTTTGTGAT
AAAGGAGTTT GTACTCACCC AAAAATTACT GATTGTATGG CATGTAATGA
AACATTTGCT TGTATTACAA CAGTATTTTG TGAATATCAG ATATGTAGTA
GTGATAAAAC CCATTGTATT CAAACAGAAA GAAATTGTGA TGATCAAAAT
GAATGCAGTA CTGATTTTTG TCAAAACGAT CAATGTTCTC ATTATTTTCC
TAAAGATTGT TTCTTGTGTG GAAATCAAAC CTGCCATGAT TATGACATAT
GCTACCCAGC CTATTGTGAT ATCAGCACTT CCACTTGTGC CAACACTACT
TTGACTTGTG ACGATAAGGA CCCATGTACA AAAGATATTT GTTTTTCAGG
AACGGGTTGT GGATTTGTAA CTATAGATAG GTGTACAAAA TGTAATGAAA
CTGTAGCATG CATTGAAAAG GATTTATGTA AATCATTGCA ATGTCCTGCC
GATGGGTCTG ATGAATGTAT TTCCTCTGAT AAGAATTGTG ATGATGGTAA
TCCATGTACA TATTCAGAGT GTGATCCTGA AACTGGTTCA TGTATAGATT
CATTCATTGA AGGTTGTTCA CTTTGTTCAA AGCCAGGTGT ATA

Translated Amino Acid Sequence Contig-U13205-1

<All Frames> 
CITTDFCDPQICXGDPLNLSCIKNMSMCDDGNYCTTDICSGNGVCSHSSPDPLCRSCKST
NCTTTDLCQLQICSADGSGCETDQKGLCDDKDPCTTDLCDKGVCTHPKITDCMACNETFA
CITTVFCEYQICSSDKTHCIQTERNCDDQNECSTDFCQNDQCSHYFPKDCFLCGNQTCHD
YDICYPAYCDISTSTCANTTLTCDDKDPCTKDICFSGTGCGFVTIDRCTKCNETVACIEK
DLCKSLQCPADGSDECISSDKNCDDGNPCTYSECDPETGSCIDSFIEGCSLCSKPGV


Homology Contig-U13205-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U13205-1 (Contig-U13205-1Q) /CSM_Contig/Conti...  1764  0.0
Contig-U13087-1 (Contig-U13087-1Q) /CSM_Contig/Conti...    50  4e-06
Contig-U12833-1 (Contig-U12833-1Q) /CSM_Contig/Conti...    50  4e-06
Contig-U14682-1 (Contig-U14682-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U12894-1 (Contig-U12894-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U11926-1 (Contig-U11926-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U03117-1 (Contig-U03117-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U12151-1 (Contig-U12151-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U11419-1 (Contig-U11419-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U10800-1 (Contig-U10800-1Q) /CSM_Contig/Conti...    36  0.063


Homology Contig-U13205-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(AU061012) Dictyostelium discoideum slug cDNA, clone SLC611.     1265   0.0    1
(BJ390802) Dictyostelium discoideum cDNA clone:dds23d20, 5' ...   999   0.0    1
(BJ409212) Dictyostelium discoideum cDNA clone:dds40a04, 3' ...   718   0.0    1
(AU061445) Dictyostelium discoideum slug cDNA, clone SLE276.       40   3e-04  3
(AU061444) Dictyostelium discoideum slug cDNA, clone SLE275.       40   3e-04  3
(BJ361342) Dictyostelium discoideum cDNA clone:ddc16f21, 5' ...    40   3e-04  3
(BJ389254) Dictyostelium discoideum cDNA clone:dds18i02, 5' ...    40   3e-04  3
(BJ387899) Dictyostelium discoideum cDNA clone:dds5o16, 5' e...    40   4e-04  3
(BJ360425) Dictyostelium discoideum cDNA clone:ddc6f03, 5' e...    40   4e-04  3
(BJ359140) Dictyostelium discoideum cDNA clone:ddc13c03, 5' ...    40   4e-04  3


Homology Contig-U13205-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor;                223   9e-57
(Q54C31) RecName: Full=Protein psiR; Flags: Precursor;                193   6e-48
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso...   147   4e-34
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos...   141   3e-32
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell...   138   3e-31
S44208(S44208) extracellular matrix protein B - Dictyostelium mi...   137   4e-31
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste...   137   4e-31
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                121   4e-26
A27020(A27020)DIF-induced prestalk pDd63 protein precursor - sli...   119   2e-25
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                 94   6e-18


<Clone: Contig-U13205-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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