<Clone: Contig-U13202-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Contig-U13202-1
Dictyostelium discoideum cDNA Project Home
Assembled
Chromosomal Location of Contig-U13202-1
<
more Chromosomal info
>
| Chromosome Number |
4 |
| Length |
5430582 |
| Start Poin |
1,301,578 |
| End Point |
1,302,630 |
| Strand |
PLUS |
Sequence Contig-U13202-1
ACTGTTGGCC TACTGGGATT TTCTGCAGTA ATAATAAAAT CAAATAAAAA
AAAATATAAA ATGAGAGTAT TATTATCATT AGTTGTAATT TTATTCATTA
TAAATTCAGC CTTTGCTGTA AAGATTAATA TTGGTCGTCC AACCAAATCA
CATAAAACTA TCCATCACGA AACTTGGGTA GAAGAACAAA CTGATCAATT
CGATAATATT AAAGTTGGCC AATTTATTAG GGTTCCAAGG GGAGCCCAAC
CAGCCCAAAC CTCCAAATTC ACCCTTATGA TCCATTAGGG GGTCAAATCC
CACTTCTTTT CAATGCTCCA ACCCAACTGG CCAAATTGTA CTACCATTGG
TCCGGTTCAA AATCAAGCAA GATGTGGTTC CTTGTTGGGC TTTTGGGTGC
TACAGAATCA GCTACTGACC GTTTTATGTA TTCACAATAA TGAAAAATGT
TCAATTAAGT TTTATGGATA TGGTTACTTG TGATGAAACT TGATAACGGT
TGTGAAGGTG GTGATGCCTT CTCTGCATGG AATTGGTTAA GAAAGCAAGG
TGCTGTATCA GAAGAATGTC TTCCATATAC AATTCCAACT TGTCCACCAG
CTCAACAACC ATGTTTAAAT TTTGTCAACA CTCCATCATG TACTAAAGAG
TGTCAATCAA ATTCCTCTTT AATTTATTCT CAAGACAAAC ATAAAATGGC
TAAAATTTAT TCTTTCGACT CTGATGAAGC AATCATGCAA GAAATTGTTA
CTAATGGTCC AGTCGAAGCT TGTTTCACTG TCTTTGAAGA TTTCCTTGCT
TACAAATCTG GTGTTTACGT CCACACAACT GGTAAAGATT TAGGTGGTCA
CTGTGTTAAA CTCGTTGGTT TCGGTACCTT AAATGGTGTT GATTACTATG
CCGCTAACAA CCAATGGACA ACTTCATGGG GTGATAATGG AACTTTCTTA
ATCAAACGTG GTGATTGCGG TATCTCTGAT GACGTTGTTG CTGGTTTACC
ATAAATAAAA ATAAGTTTTA AACATTTTGT AATTTTAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAA
Translated Amino Acid Sequence Contig-U13202-1
<All Frames>
cwptgifcsnnkik*kki*nesiiiiscnfihykfslcckd*ywssnqit*nypsrnlgr
rtn*sir*y*swpiy*gskgsptspnlqihpydplggqipllfnaptqlaklyyhwsgsk
sskmwflvgllgatesatdrfmysq**kmfn*VLWIWLLVMKLDNGCEGGDAFSAWNWLR
KQGAVSEECLPYTIPTCPPAQQPCLNFVNTPSCTKECQSNSSLIYSQDKHKMAKIYSFDS
DEAIMQEIVTNGPVEACFTVFEDFLAYKSGVYVHTTGKDLGGHCVKLVGFGTLNGVDYYA
ANNQWTTSWGDNGTFLIKRGDCGISDDVVAGLP*ikisfkhfvilkkkkkkkkkkkkkkk
Homology Contig-U13202-1 vs CSM-Contig
<more CONTIG info>
Sequences producing significant alignments: (bits) Value
Contig-U13202-1 (Contig-U13202-1Q) /CSM_Contig/Conti... 2000 0.0
Contig-U13857-1 (Contig-U13857-1Q) /CSM_Contig/Conti... 44 3e-04
Contig-U10140-1 (Contig-U10140-1Q) /CSM_Contig/Conti... 44 3e-04
Contig-U08180-1 (Contig-U08180-1Q) /CSM_Contig/Conti... 44 3e-04
Contig-U10369-1 (Contig-U10369-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U12254-1 (Contig-U12254-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U13512-1 (Contig-U13512-1Q) /CSM_Contig/Conti... 38 0.019
Contig-U13154-1 (Contig-U13154-1Q) /CSM_Contig/Conti... 38 0.019
Contig-U12105-1 (Contig-U12105-1Q) /CSM_Contig/Conti... 38 0.019
Contig-U11914-1 (Contig-U11914-1Q) /CSM_Contig/Conti... 38 0.019
Homology Contig-U13202-1 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(AU037786) Dictyostelium discoideum slug cDNA, clone SSE291. 1128 0.0 1
(AU039348) Dictyostelium discoideum slug cDNA, clone SLH613. 1082 0.0 4
(C94499) Dictyostelium discoideum slug cDNA, clone SSL106. 1082 0.0 2
(C94428) Dictyostelium discoideum slug cDNA, clone SSK787. 1082 0.0 6
(C94404) Dictyostelium discoideum slug cDNA, clone SSK654. 1082 0.0 6
(C94345) Dictyostelium discoideum slug cDNA, clone SSK863. 1082 0.0 6
(C93840) Dictyostelium discoideum slug cDNA, clone SSL776. 1082 0.0 3
(C92376) Dictyostelium discoideum slug cDNA, clone SSE709. 1082 0.0 6
(C91499) Dictyostelium discoideum slug cDNA, clone SSK354. 1082 0.0 2
(AU261866) Dictyostelium discoideum vegetative cDNA clone:VS... 1076 0.0 3
Homology Contig-U13202-1 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q54QD9) RecName: Full=Cathepsin B; EC=3.4.22.1; AltNam... 398 e-109
AC149038_4(AC149038|pid:none) Medicago truncatula chromosome 7 c... 169 4e-45
AB377273_1(AB377273|pid:none) Raphanus sativus CatB mRNA for cat... 164 8e-45
BC072490_1(BC072490|pid:none) Rattus norvegicus cathepsin B, mRN... 168 2e-44
(P00787) RecName: Full=Cathepsin B; EC=3.4.22.1; AltNam... 168 2e-44
M11305_1(M11305|pid:none) Rat cathepsin B mRNA, 3' end. 168 2e-44
BC115254_1(BC115254|pid:none) Danio rerio capthepsin B, b, mRNA ... 164 7e-44
AC149038_3(AC149038|pid:none) Medicago truncatula chromosome 7 c... 164 2e-43
AF083797_1(AF083797|pid:none) Arabidopsis thaliana clone sps897 ... 161 3e-43
(P07688) RecName: Full=Cathepsin B; EC=3.4.22.1; AltNam... 161 3e-43
<Clone: Contig-U13202-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home