Homology Contig-U13202-1 vs DNA
Query= Contig-U13202-1 (Contig-U13202-1Q) /CSM_Contig/Contig-U13202-1Q.Seq.d
(1083 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU037786) Dictyostelium discoideum slug cDNA, clone SSE291. 1128 0.0 1
(AU039348) Dictyostelium discoideum slug cDNA, clone SLH613. 1082 0.0 4
(C94499) Dictyostelium discoideum slug cDNA, clone SSL106. 1082 0.0 2
(C94428) Dictyostelium discoideum slug cDNA, clone SSK787. 1082 0.0 6
(C94404) Dictyostelium discoideum slug cDNA, clone SSK654. 1082 0.0 6
(C94345) Dictyostelium discoideum slug cDNA, clone SSK863. 1082 0.0 6
(C93840) Dictyostelium discoideum slug cDNA, clone SSL776. 1082 0.0 3
(C92376) Dictyostelium discoideum slug cDNA, clone SSE709. 1082 0.0 6
(C91499) Dictyostelium discoideum slug cDNA, clone SSK354. 1082 0.0 2
(AU261866) Dictyostelium discoideum vegetative cDNA clone:VS... 1076 0.0 3
(C84682) Dictyostelium discoideum slug cDNA, clone SSD418. 1076 0.0 6
(AU262333) Dictyostelium discoideum vegetative cDNA clone:VS... 1074 0.0 2
(AU037450) Dictyostelium discoideum slug cDNA, clone SSD653. 1070 0.0 3
(AU262840) Dictyostelium discoideum vegetative cDNA clone:VS... 1057 0.0 2
(AU263533) Dictyostelium discoideum vegetative cDNA clone:VS... 993 0.0 3
(BJ432035) Dictyostelium discoideum cDNA clone:ddv17l10, 3' ... 993 0.0 7
(BJ431941) Dictyostelium discoideum cDNA clone:ddv17i04, 3' ... 993 0.0 7
(BJ430765) Dictyostelium discoideum cDNA clone:ddv8m13, 3' e... 993 0.0 7
(BJ401147) Dictyostelium discoideum cDNA clone:dds22e10, 3' ... 993 0.0 7
(AU268125) Dictyostelium discoideum vegetative cDNA clone:VS... 987 0.0 6
(BJ429567) Dictyostelium discoideum cDNA clone:ddv4a04, 3' e... 985 0.0 8
(BJ435788) Dictyostelium discoideum cDNA clone:ddv28i12, 3' ... 894 0.0 6
(BJ433286) Dictyostelium discoideum cDNA clone:ddv21h08, 3' ... 888 0.0 7
(BJ436184) Dictyostelium discoideum cDNA clone:ddv30d08, 3' ... 886 0.0 7
(BJ431933) Dictyostelium discoideum cDNA clone:ddv17g05, 3' ... 722 0.0 8
(BJ431696) Dictyostelium discoideum cDNA clone:ddv15l02, 3' ... 601 0.0 7
(C94000) Dictyostelium discoideum slug cDNA, clone SSK682. 1074 0.0 2
(BJ428100) Dictyostelium discoideum cDNA clone:ddv10c19, 3' ... 969 0.0 4
(AU062106) Dictyostelium discoideum slug cDNA, clone SLH613. 529 0.0 9
(AU262007) Dictyostelium discoideum vegetative cDNA clone:VS... 1011 0.0 1
(AU037764) Dictyostelium discoideum slug cDNA, clone SSE265. 993 0.0 1
(BJ401452) Dictyostelium discoideum cDNA clone:dds23e10, 3' ... 739 0.0 6
(BJ433429) Dictyostelium discoideum cDNA clone:ddv21h19, 3' ... 914 0.0 2
(BJ415072) Dictyostelium discoideum cDNA clone:ddv21h08, 5' ... 359 0.0 9
(AU268124) Dictyostelium discoideum vegetative cDNA clone:VS... 722 0.0 6
(AU262011) Dictyostelium discoideum vegetative cDNA clone:VS... 856 0.0 1
(AU038379) Dictyostelium discoideum slug cDNA, clone SSH638. 805 0.0 1
(BJ417339) Dictyostelium discoideum cDNA clone:ddv30d08, 5' ... 500 0.0 8
(BJ413831) Dictyostelium discoideum cDNA clone:ddv17i04, 5' ... 337 0.0 9
(BJ413822) Dictyostelium discoideum cDNA clone:ddv17g05, 5' ... 337 0.0 9
(BJ413341) Dictyostelium discoideum cDNA clone:ddv15l02, 5' ... 337 0.0 9
(AU263532) Dictyostelium discoideum vegetative cDNA clone:VS... 337 0.0 8
(BJ417665) Dictyostelium discoideum cDNA clone:ddv28i12, 5' ... 337 0.0 9
(BJ414499) Dictyostelium discoideum cDNA clone:ddv19j11, 5' ... 325 0.0 8
(AU034136) Dictyostelium discoideum slug cDNA, clone SLB785. 674 0.0 1
(BJ413921) Dictyostelium discoideum cDNA clone:ddv17l10, 5' ... 337 0.0 9
(BJ412481) Dictyostelium discoideum cDNA clone:ddv8m13, 5' e... 337 0.0 9
(BJ415217) Dictyostelium discoideum cDNA clone:ddv21h19, 5' ... 337 0.0 9
(BJ436213) Dictyostelium discoideum cDNA clone:ddv30l09, 3' ... 587 e-163 1
(BJ409973) Dictyostelium discoideum cDNA clone:ddv10c19, 5' ... 337 e-163 8
(BJ417377) Dictyostelium discoideum cDNA clone:ddv30l09, 5' ... 337 e-153 8
(AU038711) Dictyostelium discoideum slug cDNA, clone SSL381. 521 e-143 1
(AU071846) Dictyostelium discoideum slug cDNA, clone SSC626. 476 e-130 1
(AU034700) Dictyostelium discoideum slug cDNA, clone SLE207. 353 9e-93 1
(AU072352) Dictyostelium discoideum slug cDNA, clone SSE265. 337 6e-88 1
(AU072035) Dictyostelium discoideum slug cDNA, clone SSD230. 337 6e-88 1
(BJ390404) Dictyostelium discoideum cDNA clone:dds22e10, 5' ... 248 8e-82 2
(AU060278) Dictyostelium discoideum slug cDNA, clone SLA839. 303 8e-78 1
(AU264197) Dictyostelium discoideum vegetative cDNA clone:VS... 90 1e-38 4
(GO010670) LJGBM55TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA ... 42 0.039 2
(CN759624) ID0AAA26AD03RM1 ApMS Acyrthosiphon pisum cDNA clo... 38 0.090 3
(CR855398) Xenopus tropicalis finished cDNA, clone TNeu111j09. 50 0.19 1
(BC088559) Xenopus tropicalis cell division cycle associated... 50 0.19 1
(BK006321) TPA_inf: Acyrthosiphon pisum cathepsin B (catb-34... 50 0.19 1
(EL855005) CBXT11847.g1 NICHD_XGC_trop_25 Xenopus (Silurana)... 50 0.19 1
(EL855004) CBXT11847.b1 NICHD_XGC_trop_25 Xenopus (Silurana)... 50 0.19 1
(DV743118) ID0AFF9AB06CM1 ID0AFF Acyrthosiphon pisum cDNA cl... 50 0.19 1
(DR898192) JGI_XZT45443.rev NIH_XGC_tropTad5 Xenopus (Silura... 50 0.19 1
(DR897849) JGI_XZT43798.rev NIH_XGC_tropTad5 Xenopus (Silura... 50 0.19 1
(DN073294) JGI_CABD7675.rev NIH_XGC_tropLun1 Xenopus (Silura... 50 0.19 1
(DC142515) Xenopus (Silurana) tropicalis NBRP cDNA clone: rs... 50 0.19 1
(CX929968) JGI_CAAO588.rev NIH_XGC_tropTe5 Xenopus (Silurana... 50 0.19 1
(CX448680) JGI_XZG26371.rev NIH_XGC_tropGas7 Xenopus (Silura... 50 0.19 1
(CX400803) JGI_XZT4676.fwd NIH_XGC_tropTad5 Xenopus (Siluran... 50 0.19 1
(CX400802) JGI_XZT4676.rev NIH_XGC_tropTad5 Xenopus (Siluran... 50 0.19 1
(CX346140) JGI_XZT43482.rev NIH_XGC_tropTad5 Xenopus (Silura... 50 0.19 1
(CX340953) JGI_XZT45443.fwd NIH_XGC_tropTad5 Xenopus (Silura... 50 0.19 1
(CX340163) JGI_XZT72562.rev NIH_XGC_tropTad5 Xenopus (Silura... 50 0.19 1
(CX338363) JGI_XZT60137.fwd NIH_XGC_tropTad5 Xenopus (Silura... 50 0.19 1
(CX338362) JGI_XZT60137.rev NIH_XGC_tropTad5 Xenopus (Silura... 50 0.19 1
(CX329506) JGI_XZT68289.fwd NIH_XGC_tropTad5 Xenopus (Silura... 50 0.19 1
(CX329505) JGI_XZT68289.rev NIH_XGC_tropTad5 Xenopus (Silura... 50 0.19 1
(CX313675) JGI_XZT9370.fwd NIH_XGC_tropTad5 Xenopus (Siluran... 50 0.19 1
(CX313674) JGI_XZT9370.rev NIH_XGC_tropTad5 Xenopus (Siluran... 50 0.19 1
(CR585422) Xenopus tropicalis EST, clone THdA035m13 3'. 50 0.19 1
(CR583717) Xenopus tropicalis EST, clone THdA048a11 3'. 50 0.19 1
(CR577862) Xenopus tropicalis EST, clone THdA025f16 3'. 50 0.19 1
(CR577861) Xenopus tropicalis EST, clone THdA025f16 5'. 50 0.19 1
(CR437074) Xenopus tropicalis EST, clone TTbA054d02 5'. 50 0.19 1
(CR414427) Xenopus tropicalis EST, clone TTbA006j22 3'. 50 0.19 1
(CR412831) Xenopus tropicalis EST, clone TTbA063e10 3'. 50 0.19 1
(CR408072) Xenopus tropicalis EST, clone TTbA004a17 3'. 50 0.19 1
(AL677696) Xenopus tropicalis EST, clone TNeu057j18 5'. 50 0.19 1
(CN112300) EC2CAA38BG11.b1 Xenopus tropicalis xthr plasmid l... 50 0.19 1
(CN097228) EC2CAA12CG04.g1 Xenopus tropicalis xthr plasmid l... 50 0.19 1
(CJ473875) Macaca fascicularis mRNA, clone: QorA-13930, 5' e... 50 0.19 1
(CF264541) AGENCOURT_15137220 NICHD_XGC_Emb7 Xenopus (Silura... 50 0.19 1
(BX735953) Xenopus tropicalis EST, clone TTpA076a08 3'. 50 0.19 1
(BX735950) Xenopus tropicalis EST, clone TTpA076a04 3'. 50 0.19 1
(BX733264) Xenopus tropicalis EST, clone TTpA057g15 3'. 50 0.19 1
(BX728966) Xenopus tropicalis EST, clone TTpA070g22 5'. 50 0.19 1
(BX710757) Xenopus tropicalis EST, clone TTpA013k08 3'. 50 0.19 1
(BX695627) Xenopus tropicalis EST, clone TNeu111j09 3'. 50 0.19 1
(BX683998) Xenopus tropicalis EST, clone TNeu057j18 3'. 50 0.19 1
(BX683590) Xenopus tropicalis EST, clone TNeu072n06 3'. 50 0.19 1
(FF325712) 280426957 Pea aphid whole body normalized full le... 50 0.19 1
(FF322246) 280415482 Pea aphid whole body normalized full le... 50 0.19 1
(FF316079) 280374819 Pea aphid whole body normalized full le... 50 0.19 1
(ES678174) CCAX4350.b1 NICHD_XGC_tropEye1 Xenopus (Silurana)... 50 0.19 1
(AK342352) Acyrthosiphon pisum ACYPI000003 mRNA, clone: 371O... 38 0.30 3
(FE247796) CAPH1318.rev CAPH Naegleria gruberi amoeba stage ... 32 0.32 4
(BW640122) Dugesia ryukyuensis mRNA, clone: Dr_sW_017_C18, 5... 40 0.36 3
(BW643229) Dugesia ryukyuensis mRNA, clone: Dr_sW_026_L20, 5... 40 0.38 3
(BW635655) Dugesia ryukyuensis mRNA, clone: Dr_sW_003_A14, 5... 40 0.39 3
(BW642458) Dugesia ryukyuensis mRNA, clone: Dr_sW_024_G01, 5... 40 0.43 3
(BW640885) Dugesia ryukyuensis mRNA, clone: Dr_sW_019_J19, 5... 40 0.43 3
(BW643532) Dugesia ryukyuensis mRNA, clone: Dr_sW_027_K08, 5... 40 0.43 3
(BW637095) Dugesia ryukyuensis mRNA, clone: Dr_sW_007_H08, 5... 40 0.48 3
(BK006309) TPA_inf: Acyrthosiphon pisum cathepsin B (catb-34... 38 0.50 3
(BX248131) Zebrafish DNA sequence from clone CH211-236P5. 48 0.75 1
(CJ463486) Macaca fascicularis mRNA, clone: QnpA-11803, 5' e... 48 0.75 1
(CJ434836) Macaca fascicularis mRNA, clone: QccE-11849, 5' e... 48 0.75 1
(AC153931) Mus musculus 10 BAC RP24-147A18 (Roswell Park Can... 36 1.3 6
(CR376761) Zebrafish DNA sequence from clone DKEY-6F24 in li... 36 1.5 2
(CL664099) PRI0146a_G12 - PRI0146a.B21 (854) Mixed stage fos... 34 2.0 2
(EF633478) Acyrthosiphon pisum isolate ApP cathepsin B-348 m... 38 2.5 2
(ED152472) AUAC-aax61d08.g1 Ascaris suum whole genome shotgu... 42 2.6 2
(DY227510) ID0AAK1YF08CM1 ApHL3SD Acyrthosiphon pisum cDNA c... 38 2.6 2
(CN585409) USDA-FP_128480 Acyrthosiphon pisum, Pea Aphid Acy... 38 2.6 2
(CN755102) ID0AAA14DF01RM1 ApMS Acyrthosiphon pisum cDNA clo... 38 2.6 2
(CN761081) ID0AAA2BD08RM1 ApMS Acyrthosiphon pisum cDNA clon... 38 2.9 2
(BV324618) S241P6200FG10.T0 IndiaGrayWolf Canis lupus STS ge... 46 2.9 1
(AC166828) Mus musculus BAC clone RP23-332O23 from chromosom... 46 2.9 1
(AC164099) Mus musculus BAC clone RP23-10H9 from chromosome ... 46 2.9 1
(AC132434) Mus musculus BAC clone RP23-221F13 from 12, compl... 46 2.9 1
(AC124778) Mus musculus BAC clone RP23-92N3 from 9, complete... 46 2.9 1
(AM462278) Vitis vinifera contig VV78X039925.4, whole genome... 46 2.9 1
(CT009543) Human DNA sequence from clone CHORI-516-BCA211N3 ... 46 2.9 1
(CR956620) Human DNA sequence from clone CHORI-516-BCA362L20... 46 2.9 1
(AL160279) Human DNA sequence from clone RP11-65B23 on chrom... 46 2.9 1
(AC142173) Rattus norvegicus clone CH230-135C19, WORKING DRA... 46 2.9 1
(AC128755) Rattus norvegicus clone CH230-183F18, *** SEQUENC... 46 2.9 1
(AC116824) Mus musculus clone RP24-366J7, WORKING DRAFT SEQU... 46 2.9 1
(AC114053) Rattus norvegicus clone CH230-190E17, *** SEQUENC... 46 2.9 1
(CU571127) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.9 1
(AC079734) Mus musculus strain C57BL6/J chromosome 12 clone ... 46 2.9 1
(CU468091) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.9 1
(AZ448597) 1M0246E23F Mouse 10kb plasmid UUGC1M library Mus ... 46 2.9 1
(AZ431102) 1M0215D21R Mouse 10kb plasmid UUGC1M library Mus ... 46 2.9 1
(ER498791) 1093015391566 Global-Ocean-Sampling_GS-35-01-01-1... 46 2.9 1
(EJ875220) 1093018365957 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.9 1
(EJ866058) 1093018279681 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.9 1
(EJ793828) 1093017390121 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.9 1
(EJ385271) 1092963801844 Global-Ocean-Sampling_GS-28-01-01-1... 46 2.9 1
(EJ116584) 1092343355274 Global-Ocean-Sampling_GS-27-01-01-1... 46 2.9 1
(DX424523) BE1078_O18_F IASMA L1 HindIII BAC library Vitis v... 46 2.9 1
(CU861319) A BAC library has been constructed from PN40024 g... 46 2.9 1
(CU853197) A BAC library has been constructed from PN40024 g... 46 2.9 1
(CU816210) A BAC library has been constructed from PN40024 g... 46 2.9 1
(CJ479794) Macaca fascicularis mRNA, clone: QtrA-15175, 5' e... 46 2.9 1
(CJ466605) Macaca fascicularis mRNA, clone: QnpA-15992, 5' e... 46 2.9 1
(CJ455862) Macaca fascicularis mRNA, clone: QflA-21671, 5' e... 46 2.9 1
(CJ454905) Macaca fascicularis mRNA, clone: QflA-20665, 5' e... 46 2.9 1
(CJ445210) Macaca fascicularis mRNA, clone: QflA-10343, 5' e... 46 2.9 1
(CF594844) AGENCOURT_15713122 NIH_ZGC_8 Danio rerio cDNA clo... 46 2.9 1
(BJ416106) Dictyostelium discoideum cDNA clone:ddv25a02, 5' ... 46 2.9 1
(EX650698) 256741797 Pea aphid whole body normalized full le... 46 2.9 1
(EV484526) 060G03 Cotton Lambda Zap Express Library Gossypiu... 46 2.9 1
(BX842696) Zebrafish DNA sequence from clone DKEY-165P1 in l... 32 3.5 8
(AX346142) Sequence 1213 from Patent WO0200928. 44 7.1 2
(EJ705045) 1092956050453 Global-Ocean-Sampling_GS-30-02-01-1... 40 7.4 2
(EY627967) CAWW20381.fwd CAWW Capitella sp. I ECS-2004 Subtr... 34 7.5 2
(EY627966) CAWW20381.rev CAWW Capitella sp. I ECS-2004 Subtr... 34 7.5 2
(EY620967) CAWW16030.fwd CAWW Capitella sp. I ECS-2004 Subtr... 34 7.5 2
(EY620966) CAWW16030.rev CAWW Capitella sp. I ECS-2004 Subtr... 34 7.5 2
(BJ396872) Dictyostelium discoideum cDNA clone:dds44c09, 5' ... 34 7.5 2
(BW638780) Dugesia ryukyuensis mRNA, clone: Dr_sW_012_K19, 5... 40 8.0 2
(CU947114) Brassica napus GSS, clone JBnB140L05, end read, p... 34 8.0 2
(CX593439) CT020005A10F10 Equine Articular Cartilage cDNA Li... 36 8.2 3
(BJ415687) Dictyostelium discoideum cDNA clone:ddv23j10, 5' ... 36 8.4 2
(BK006324) TPA_inf: Myzus persicae cathepsin B (catb-348) mR... 32 8.4 3
(BJ416535) Dictyostelium discoideum cDNA clone:ddv26a20, 5' ... 36 8.6 2
(BW642225) Dugesia ryukyuensis mRNA, clone: Dr_sW_023_K19, 5... 40 9.3 2
(BJ367125) Dictyostelium discoideum cDNA clone:ddc41p12, 5' ... 40 9.3 2
(CJ437029) Macaca fascicularis mRNA, clone: QccE-14168, 5' e... 40 9.5 2
(CJ453982) Macaca fascicularis mRNA, clone: QflA-19705, 5' e... 38 9.5 2
(CU945867) Brassica napus GSS, clone JBnB140B11, end read, p... 34 9.5 2
(BW640298) Dugesia ryukyuensis mRNA, clone: Dr_sW_017_L19, 5... 40 9.9 2
(BW635575) Dugesia ryukyuensis mRNA, clone: Dr_sW_002_M07, 5... 40 10.0 2
>(AU037786) Dictyostelium discoideum slug cDNA, clone SSE291.
Length = 584
Score = 1128 bits (569), Expect = 0.0
Identities = 569/569 (100%)
Strand = Plus / Plus
Query: 468 atatggttacttgtgatgaaacttgataacggttgtgaaggtggtgatgccttctctgca 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atatggttacttgtgatgaaacttgataacggttgtgaaggtggtgatgccttctctgca 60
Query: 528 tggaattggttaagaaagcaaggtgctgtatcagaagaatgtcttccatatacaattcca 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggaattggttaagaaagcaaggtgctgtatcagaagaatgtcttccatatacaattcca 120
Query: 588 acttgtccaccagctcaacaaccatgtttaaattttgtcaacactccatcatgtactaaa 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acttgtccaccagctcaacaaccatgtttaaattttgtcaacactccatcatgtactaaa 180
Query: 648 gagtgtcaatcaaattcctctttaatttattctcaagacaaacataaaatggctaaaatt 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagtgtcaatcaaattcctctttaatttattctcaagacaaacataaaatggctaaaatt 240
Query: 708 tattctttcgactctgatgaagcaatcatgcaagaaattgttactaatggtccagtcgaa 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tattctttcgactctgatgaagcaatcatgcaagaaattgttactaatggtccagtcgaa 300
Query: 768 gcttgtttcactgtctttgaagatttccttgcttacaaatctggtgtttacgtccacaca 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcttgtttcactgtctttgaagatttccttgcttacaaatctggtgtttacgtccacaca 360
Query: 828 actggtaaagatttaggtggtcactgtgttaaactcgttggtttcggtaccttaaatggt 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actggtaaagatttaggtggtcactgtgttaaactcgttggtttcggtaccttaaatggt 420
Query: 888 gttgattactatgccgctaacaaccaatggacaacttcatggggtgataatggaactttc 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttgattactatgccgctaacaaccaatggacaacttcatggggtgataatggaactttc 480
Query: 948 ttaatcaaacgtggtgattgcggtatctctgatgacgttgttgctggtttaccataaata 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttaatcaaacgtggtgattgcggtatctctgatgacgttgttgctggtttaccataaata 540
Query: 1008 aaaataagttttaaacattttgtaatttt 1036
|||||||||||||||||||||||||||||
Sbjct: 541 aaaataagttttaaacattttgtaatttt 569
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,321,548,683
Number of extensions: 78971509
Number of successful extensions: 6320600
Number of sequences better than 10.0: 198
Length of query: 1083
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1059
Effective length of database: 104,103,628,548
Effective search space: 110245742632332
Effective search space used: 110245742632332
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home