<Clone: Contig-U13200-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Contig-U13200-1
Dictyostelium discoideum cDNA Project Home
Assembled
Chromosomal Location of Contig-U13200-1
<
more Chromosomal info
>
| Chromosome Number |
2 |
| Length |
8467578 |
| Start Poin |
7,923,951 |
| End Point |
7,924,563 |
| Strand |
PLUS |
Sequence Contig-U13200-1
TGCTCTTTAA GATGTCCACC AAATTCATGA ATGTAGATTT AATGACCNAA
TCATGAATGT AAATTTGATG ATCATGGTAA AAAATGTTGT GTAAAGATTC
ATTGTGATGA AGTTTGTGAT TTAGANTGTG GTAGAGGTTT TGAATGTAAA
ATTAGACATG ATGGTTCAAA ATGTTGTGTC CGTTCAGAAA GACCACACCC
ACCACAACAT GAAAAATGTA ATAAGAGATG CCCACCAGGC CATGAATGTA
AAGTTGATCA ACATGGAAAA GAATGTTGCG TTGTTGCCCA TAGACCACCA
CCAAAATGCT CTTTAAGATG TCCACCAAGA CATGAATGTA GAGTCAACCA
CTTTGGTGAA GAATGTTGTG TTAAAGTTCA CCACGATAAA TGTTCATTGA
GATGTCCACC AGGCCATGAA TGTAAAGTTG ATCAACATGG AAAAGAATGT
TGCGTTGTTG CCCATAGACC ACCACCAAAA TGCTCATTNA GATGTCCACC
NAAACATGAA TGTAGAATCA ATCACTTTGG TGAAGAATGC TGTGTTAAAA
GTAGAAANGA TTGTTTAACT TGTGAAGACC TAAACTGTGA AAGAAAAGGT
TTACATTGTG CC
Translated Amino Acid Sequence Contig-U13200-1
<All Frames>
cslrcppns*m*i**PNHECKFDDHGKKCCVKIHCDEVCDLXCGRGFECKIRHDGSKCCV
RSERPHPPQHEKCNKRCPPGHECKVDQHGKECCVVAHRPPPKCSLRCPPRHECRVNHFGE
ECCVKVHHDKCSLRCPPGHECKVDQHGKECCVVAHRPPPKCSXRCPPKHECRINHFGEEC
CVKSRXDCLTCEDLNCERKGLHCA
Homology Contig-U13200-1 vs CSM-Contig
<more CONTIG info>
Sequences producing significant alignments: (bits) Value
Contig-U13200-1 (Contig-U13200-1Q) /CSM_Contig/Conti... 1183 0.0
Contig-U14678-1 (Contig-U14678-1Q) /CSM_Contig/Conti... 555 e-158
Contig-U12890-1 (Contig-U12890-1Q) /CSM_Contig/Conti... 66 5e-11
Contig-U13925-1 (Contig-U13925-1Q) /CSM_Contig/Conti... 34 0.17
Contig-U01237-1 (Contig-U01237-1Q) /CSM_Contig/Conti... 34 0.17
Contig-U14745-1 (Contig-U14745-1Q) /CSM_Contig/Conti... 32 0.67
Contig-U14529-1 (Contig-U14529-1Q) /CSM_Contig/Conti... 32 0.67
Contig-U13836-1 (Contig-U13836-1Q) /CSM_Contig/Conti... 32 0.67
Contig-U12872-1 (Contig-U12872-1Q) /CSM_Contig/Conti... 32 0.67
Contig-U12091-1 (Contig-U12091-1Q) /CSM_Contig/Conti... 32 0.67
Homology Contig-U13200-1 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(BJ401417) Dictyostelium discoideum cDNA clone:dds23m06, 3' ... 1183 0.0 1
(U25144) Dictyostelium discoideum spore coat protein SP87 (P... 1088 0.0 1
(AU039739) Dictyostelium discoideum slug cDNA, clone SLG302. 1088 0.0 1
(AU039658) Dictyostelium discoideum slug cDNA, clone SLG130. 1088 0.0 1
(AU039532) Dictyostelium discoideum slug cDNA, clone SLE706. 1088 0.0 1
(AU039480) Dictyostelium discoideum slug cDNA, clone SLH866. 1088 0.0 1
(AU034110) Dictyostelium discoideum slug cDNA, clone SLB753. 1088 0.0 1
(C92815) Dictyostelium discoideum slug cDNA, clone SSF378. 1088 0.0 1
(BJ409658) Dictyostelium discoideum cDNA clone:dds42g23, 3' ... 1088 0.0 1
(BJ409119) Dictyostelium discoideum cDNA clone:dds39e10, 3' ... 1088 0.0 1
Homology Contig-U13200-1 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom... 411 e-114
(P15270) RecName: Full=Spore coat protein SP60; Flags: Precursor... 166 5e-40
X52105_1(X52105|pid:none) Dictyostelium discoideum SP60 gene for... 104 2e-21
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;... 69 8e-11
S72639_1(S72639|pid:none) PspB=prespore-specific gene {5' region... 60 5e-08
(P54704) RecName: Full=Spore coat protein SP85; AltName: Full=Ce... 60 5e-08
(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor; 59 1e-07
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87... 56 9e-07
T22274(T22274)hypothetical protein F46B3.9 - Caenorhabditis eleg... 55 1e-06
S07638(S07638;A60942;B60942) spore coat protein SP96 precursor -... 53 8e-06
<Clone: Contig-U13200-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
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