Dictyostelium discoideum cDNA Contig-U13145-1

Assembled

Chromosomal Location of Contig-U13145-1

Sequence Contig-U13145-1

TAAAAATGAT ATAGAAACTT TAAAACAATA TTTTGGTGAT GAGAATCTAG
TAATTGTAAA TAATAATAAT AATAATAGTA ATATTGAAGA GGAAGATGAA
GAAGAGGAGG AAGAGGATAG TCAACAACAT AATACAAGTA TGAATAGTAA
TGGTGGTAAA CCATCAATAA ACGATACAGA TGAGCAGGGT AGAACACCAT
TAATGTTTGC CAATACAGTT ATGACAGCAC AATTTCTATT GAATAGAGGT
GCAAGAATTA ATTTACGTGA TAGTGAACGT CAAACTGCAA TGCATAAAGC
ATCAATGTAC AATATACCCG ATTTGTTATC ACTCTATTTG AATACAGGCG
CACACATAAA AAGAGATTTA TCAGGTTGTA CACCACTTCA TATTTGTTCA
TATAAAGGTT TCATCAATTG CACTCAAGTT ATGATGGAGA AAGGTCCAAG
AAGAGTTAAA GCTGAAGCAC GTGATAAAAA AGGTAAAACT GCACTTCATT
ATGCTGCTGA ATCACCTGAA TCCGATGAAA TCACTGCTCA AGTTATTAAT
ATTTTAGCAT CAGGTGGTTC ATTATTAGAT ACAAAAGATA GAGAAAAGAA
AACACCATTA CATTTTTCAA CATTAATGGG TAAAGTTAAA TCAGTTAATG
TTTTATTAGA GAAAGGAGCA AATCCAGAAG TTGTTGATAT ATTTGGAGCA
TTACCATTAC ATTATGCAGT TACATGTATA ACTGGTAGAA AGATAGCAAA
ACAATTGATT GCAAAAGGAT GTAAAGTGAA TTCACCTGAT AATGTTGGTC
AAACACCAAT GTTT

Translated Amino Acid Sequence Contig-U13145-1

KNDIETLKQYFGDENLVIVNNNNNNSNIEEEDEEEEEEDSQQHNTSMNSNGGKPSINDTD
EQGRTPLMFANTVMTAQFLLNRGARINLRDSERQTAMHKASMYNIPDLLSLYLNTGAHIK
RDLSGCTPLHICSYKGFINCTQVMMEKGPRRVKAEARDKKGKTALHYAAESPESDEITAQ
VINILASGGSLLDTKDREKKTPLHFSTLMGKVKSVNVLLEKGANPEVVDIFGALPLHYAV
TCITGRKIAKQLIAKGCKVNSPDNVGQTPMF

Homology Contig-U13145-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13145-1 (Contig-U13145-1Q) /CSM_Contig/Conti...  1449  0.0
Contig-U13964-1 (Contig-U13964-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U11313-1 (Contig-U11313-1Q) /CSM_Contig/Conti...    48  2e-05
Contig-U11129-1 (Contig-U11129-1Q) /CSM_Contig/Conti...    46  6e-05
Contig-U11739-1 (Contig-U11739-1Q) /CSM_Contig/Conti...    44  2e-04
Contig-U12479-1 (Contig-U12479-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U12282-1 (Contig-U12282-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U12181-1 (Contig-U12181-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11893-1 (Contig-U11893-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U10791-1 (Contig-U10791-1Q) /CSM_Contig/Conti...    42  0.001

Homology Contig-U13145-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ371000) Dictyostelium discoideum cDNA clone:ddc56c11, 5' ...  1094   0.0    2
(AU071746) Dictyostelium discoideum slug cDNA, clone SSC434.      460   e-125  1
(GR573617) CBXU1592.b1 CBXU Dictyostelium purpureum 6 hr veg...   168   e-118  7
(GR577835) CBXW840.b1 CBXW Dictyostelium purpureum 6 hr vege...   168   e-103  5
(GR572053) CBTG465.b1 CBTG Dictyostelium purpureum 12 hr veg...   168   2e-96  4
(AU061201) Dictyostelium discoideum slug cDNA, clone SLD528.      289   9e-74  1
(GR571210) CBTG1772.g1 CBTG Dictyostelium purpureum 12 hr ve...    70   1e-19  4
(BX957280) Zebrafish DNA sequence from clone DKEY-265G1 in l...    62   4e-05  1
(AC164881) Mus musculus BAC clone RP23-246D7 from chromosome...    62   4e-05  1
(AC161595) Mus musculus BAC clone RP23-471H21 from chromosom...    62   4e-05  1

Homology Contig-U13145-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP001404_1850(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51...   105   2e-21
CR392368_2(CR392368|pid:none) Zebrafish DNA sequence from clone ...   103   9e-21
AM999887_1278(AM999887|pid:none) Wolbachia endosymbiont of Culex...   103   9e-21
CP001230_365(CP001230|pid:none) Persephonella marina EX-H1, comp...   102   2e-20
CP001230_364(CP001230|pid:none) Persephonella marina EX-H1, comp...    98   3e-19
(Q54KA7) RecName: Full=Ankyrin repeat, PH and SEC7 domain contai...    96   1e-18
AK126888_1(AK126888|pid:none) Homo sapiens cDNA FLJ44940 fis, cl...    92   2e-17
AB002377_1(AB002377|pid:none) Homo sapiens mRNA for KIAA0379 pro...    92   2e-17
BC106948_1(BC106948|pid:none) Homo sapiens ankyrin repeat domain...    92   2e-17
(O15084) RecName: Full=Serine/threonine-protein phosphatase 6 re...    92   2e-17