Homology Contig-U13060-1 vs Protein

Query= Contig-U13060-1 (Contig-U13060-1Q) /CSM_Contig/Contig-U13060-1Q.Seq.d
         (768 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134170_1(AF134170|pid:none) Dictyostelium discoideum retrotran...   343   1e-96
AB168339_1(AB168339|pid:none) Macaca fascicularis testis cDNA cl...    40   0.11
AE014188_81(AE014188|pid:none) Plasmodium falciparum 3D7 chromos...    39   0.24
AE016816_159(AE016816|pid:none) Ashbya gossypii (= Eremothecium ...    38   0.40
CR628337_2491(CR628337|pid:none) Legionella pneumophila str. Len...    37   0.53
(P50947) RecName: Full=Transcriptional regulatory protein PHO23;...    37   0.69
(O90760) RecName: Full=Putative ankyrin repeat protein FPV031;  ...    36   1.2
AK097402_1(AK097402|pid:none) Homo sapiens cDNA FLJ40083 fis, cl...    36   1.5
AE017354_2508(AE017354|pid:none) Legionella pneumophila subsp. p...    35   2.0
AE015450_384(AE015450|pid:none) Mycoplasma gallisepticum strain ...    35   2.6
(Q6LA55) RecName: Full=UPF0648 protein C3H5.09c;  &CU329670_1424...    35   2.6
(Q4A8Y0) RecName: Full=Isoleucyl-tRNA synthetase;          EC=6....    35   2.6
CP001184_154(CP001184|pid:none) Ureaplasma urealyticum serovar 1...    35   3.4
CP001083_1873(CP001083|pid:none) Clostridium botulinum Ba4 str. ...    34   5.8
BX950229_915(BX950229|pid:none) Methanococcus maripaludis strain...    34   5.8
FN357420_28(FN357420|pid:none) Schistosoma mansoni genome sequen...    33   7.6
AJ310197_1(AJ310197|pid:none) Sorghum mosaic virus genomic RNA f...    33   9.9
(P06101) RecName: Full=Hsp90 co-chaperone Cdc37; AltName: Full=H...    33   9.9
CY006007_1(CY006007|pid:none) Influenza A virus (A/green-winged ...    33   9.9
CP001078_585(CP001078|pid:none) Clostridium botulinum E3 str. Al...    33   9.9

>AF134170_1(AF134170|pid:none) Dictyostelium discoideum
           retrotransposon TRE3-B, complete sequence.
          Length = 402

 Score =  343 bits (881), Expect(2) = 1e-96
 Identities = 178/212 (83%), Positives = 182/212 (85%)
 Frame = -3

Query: 688 MADDHSTELQXXXXXXXXXXXXXXXXXXXXXXXSAKIGTPKKQTPTNKFSLNKGLDNQLD 509
           MADDHSTELQ                       SAKI TPKKQTPTN+ SLNKGLDNQLD
Sbjct: 1   MADDHSTELQLNHTDNNTTNTNNTSTTSTTKNKSAKIDTPKKQTPTNQLSLNKGLDNQLD 60

Query: 508 IIAPPSITRPLSFLEKNNNTINIKCYFNQPYIREELASKDDTRIQQIHKNIHKLFEDILS 329
           IIAPPSITRPLSFLEKNNNTINIKCYFNQP+IREEL SKDDTRIQQIHKNIHKLFEDILS
Sbjct: 61  IIAPPSITRPLSFLEKNNNTINIKCYFNQPHIREELTSKDDTRIQQIHKNIHKLFEDILS 120

Query: 328 PSAFKIISATAFVNCNVDKLTSIINLQNQLALNIDKLNYRFEISSNDYAIIKTFIQTYSP 149
           PSAFKII ATAFVNCNVDKLTSIINLQNQLALNIDKLNYRF+ISSNDYAIIKTFI+TYSP
Sbjct: 121 PSAFKIIGATAFVNCNVDKLTSIINLQNQLALNIDKLNYRFDISSNDYAIIKTFIKTYSP 180

Query: 148 KLANDAIINNLTKFTSCTSIESFTVTYSYAGA 53
           K ANDAI NNLTKFTSCTSIESFTVTYSYA A
Sbjct: 181 KHANDAITNNLTKFTSCTSIESFTVTYSYAVA 212

 Score = 33.5 bits (75), Expect(2) = 1e-96
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -1

Query: 57  VPFKSYIITYHLIDH 13
           V FKSYIITYHLIDH
Sbjct: 211 VAFKSYIITYHLIDH 225

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,119,729,655
Number of extensions: 20559188
Number of successful extensions: 46687
Number of sequences better than 10.0: 20
Number of HSP's gapped: 46668
Number of HSP's successfully gapped: 21
Length of query: 256
Length of database: 1,051,180,864
Length adjustment: 126
Effective length of query: 130
Effective length of database: 643,374,430
Effective search space: 83638675900
Effective search space used: 83638675900
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)