<Clone: Contig-U13049-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U13049-1

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Assembled

Chromosomal Location of Contig-U13049-1

< more Chromosomal info >

Chromosome Number 3
Length 6358359
Start Poin 1,977,089
End Point 1,977,531
Strand PLUS

Sequence Contig-U13049-1

---------- AAAAAGTTTC AAATAAACAA CAACTTCAAG AACAACAAAT
TAATTCACCC GAGGATATTC AATATCAATT AAATCATTTA AATCAACCAT
TCCAAGATGA CTATCATAAT GATCAAACTG AAGAATTAAA AGATGATGAT
TATAATTTTA ATGATCAACA AATTAACAAT GGTCAATTTG AAAATAATGT
TGAAGAATTT CCTGATTTAA ATGATGCTAA TGATAATTTT GAACAAGTTC
ACAACAACAA CAACAACAAC AACAAAATAT CGATCCAAAT GATCCTCCAT
TCACTGAAGA ATATATTAAA ATCGTCTTAC AAAAAAGTAA AAAGGTTAAA
TCCTTAGATT TAATCAATAT CTTTAAAGGT CCACTAAAAA ATCCAGATAA
CAAACCAATT TTCCTTGCAA TGGTTCATAA TGTTGCTCGT GTTGTTGAAG
AAAATGGTGT AAAATATTTA ATTCCAAAAT AAATAATAAA TTATAAAAAT
AACACAAAAT AAAAATAAAA ATAAAAAATA TTATA

Translated Amino Acid Sequence Contig-U13049-1

<All Frames> 
XXXXKVSNKQQLQEQQINSPEDIQYQLNHLNQPFQDDYHNDQTEELKDDDYNFNDQQINN
GQFENNVEEFPDLNDANDNFEQVHNNNNNNNKISIQMILHSLKNILKSSYKKVKRLNP*i
*sislkvh*kiqitnqfslqwfimllvllkkmv*ni*fqnk**iikitqnknknkkyy


Homology Contig-U13049-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U13049-1 (Contig-U13049-1Q) /CSM_Contig/Conti...   476  e-134
Contig-U11729-1 (Contig-U11729-1Q) /CSM_Contig/Conti...   206  2e-53
Contig-U12908-1 (Contig-U12908-1Q) /CSM_Contig/Conti...    48  1e-05
Contig-U06150-1 (Contig-U06150-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U14885-1 (Contig-U14885-1Q) /CSM_Contig/Conti...    38  0.009
Contig-U12561-1 (Contig-U12561-1Q) /CSM_Contig/Conti...    38  0.009
Contig-U12535-1 (Contig-U12535-1Q) /CSM_Contig/Conti...    38  0.009
Contig-U00425-1 (Contig-U00425-1Q) /CSM_Contig/Conti...    38  0.009
Contig-U11158-1 (Contig-U11158-1Q) /CSM_Contig/Conti...    36  0.037
Contig-U13017-1 (Contig-U13017-1Q) /CSM_Contig/Conti...    34  0.15


Homology Contig-U13049-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ382164) Dictyostelium discoideum cDNA clone:ddc43h05, 3' ...   476   0.0    3
(U25143) Dictyostelium discoideum cAMP-inducible prespore pr...   474   e-129  1
(AU062000) Dictyostelium discoideum slug cDNA, clone SLH142.      474   e-129  1
(AU061720) Dictyostelium discoideum slug cDNA, clone SLF560.      474   e-129  1
(BJ389650) Dictyostelium discoideum cDNA clone:dds19f17, 5' ...   474   e-129  1
(BJ387573) Dictyostelium discoideum cDNA clone:dds3a16, 5' e...   474   e-129  1
(BJ386712) Dictyostelium discoideum cDNA clone:dds10b07, 5' ...   474   e-129  1
(BJ385026) Dictyostelium discoideum cDNA clone:ddc51f14, 3' ...   474   e-129  1
(BJ372064) Dictyostelium discoideum cDNA clone:ddc11j04, 3' ...   474   e-129  1
(BJ363479) Dictyostelium discoideum cDNA clone:ddc26l22, 5' ...   474   e-129  1


Homology Contig-U13049-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


(P54682) RecName: Full=cAMP-inducible prespore protein D7; Flags...   170   2e-41
AL844509_273(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    40   0.038
AL034559_18(AL034559|pid:none) Plasmodium falciparum MAL3P7, com...    40   0.049
AC105744_11(AC105744|pid:none) Oryza sativa (japonica cultivar-g...    39   0.11
(Q9SU25) RecName: Full=Transcription initiation factor IIF subun...    39   0.11
AC105744_12(AC105744|pid:none) Oryza sativa (japonica cultivar-g...    39   0.11
AC105744_10(AC105744|pid:none) Oryza sativa (japonica cultivar-g...    39   0.11
AE001362_113(AE001362|pid:none) Plasmodium falciparum 3D7 chromo...    39   0.11
AL844509_183(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    39   0.11
(B0G0Y5) RecName: Full=Myb-like protein AA;                            38   0.14


<Clone: Contig-U13049-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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