Dictyostelium discoideum cDNA Contig-U13021-1

Assembled

Chromosomal Location of Contig-U13021-1

Sequence Contig-U13021-1

CTGTTGGCCT ACTGGNAATG TTGTTGTTGT TGATGATAAT GATATTTCTA
ATGGTATAAA TTTAGAAATT AAACAAATAT TATTAACTGA ACAATCAGCT
GGTAGATTAG ATCATTATTT AGAATCTAAA TTAGTTACAT CAATTCATAA
TAGGTTATTG AATATTATTG AATCCAAAAC CAATGAATGG GTTGAACCTA
TTTATAACTA TTGGATAAAA TCTGTGGATA TCGAATATCA TAATGAAATT
ACCAACTCTT TCCAAAACTT TATTCAAGAG TTTAACAGTC ATATTTGGGA
TAATAGAAAA TATCAAGCAT TCTTAAATAG AATTGTAAAT CTTCGTAGAC
AATTCCCACC ACCACCATCA TCATCACACC AACCAGCACC AAATACACCA
GCATTGTTAA CAACAACCAA AGGTATACCA ATACCAATTC AAAAGAATTC
CCAACAAGAA GAGATTGAAA TGTCAAAGAT ATTCAAACAA CTCGAATTGG
ACATCATTTA TTTGATCTCA GTTCAACATT ATTACTCTTT GAAATATATT
GAAAAACTTT TAATTGGTAC AATGGGTCAT ACTTCTGCTG ATGTTAGACA
ATCTTCAGTA CGTTTATTAA ATGTTATCTA TGATTCCCAT ACTTGGCAAT
TTGAAGAACC ATTAAAACCA GTAATAAGAG TTATTGGTGA TGCTTTTAGA
ATTGAATTAG AATTGGACCA ACCATTACCT GAAAATGTAT TAAAAAGAAT
TTATATTACA ACAGTTCAAC CACCAACTCA AAGATTAACA AACTTTAAAT
CGAGTACTAT TAAAATTGGT GGTACTTATG GAAAAAATAA ACAAAACTTA
CAATCATCAT CAGCAATTTT CACAAAACAT AAACCTAAAG TTGATGGTTG
TAAATTATAT ATAGATTTAC CATCATTCTA TAGAGCTGGT TATTATGATT
GGAGAGTTGT TGAATTAAAA TCAAATGGTA AATTTGTTTC ATTTGATTTT
GAAACTTTTA AATTAAAATC ATCAAAAGAT GAAAACTATA AACAAACAGA
TAGTGCATCA TCATCATCAT CATCAATTAA TGATAATCAA CCAATGATAT
CAGATGAAAA TGAAAAAATT CAAGGTAGAT TTATAGTTCA TCCAAAATTA
AGAGAAGAAA TTATGCATGA AGTTTGGGTA GATTTACAAG ATTCAATTTG
GGATCCATAT AGAGGTGAAA TGACAAAAAA AGGTAGAATT CAAAATTTAA
TTGATGCTTT AGATCATTAT CATCAAGAGG GTATTACTAC ACTTTATGTT
ATGGGTTTAT TAGAGAAATT ACCAAGTAAT CAACCATTAT GTCCAACCGA
TAGAGATTTA GCAAATCGTT TAATTGGTGG TGATCAAATG TTCTCACAAT
TGGTTAATAG AGCTAAACAA TTGGGTATAA AGATTGTTAT CGATTCAACA
ACTCGTTTAT CATCCAAAGC AGCCCATAGA AAATATAAAG GTGTGGTTTG
TCATACTTTG GATAATAATG GTCAACTCTC AAGATTGGAA GGTACCGATA
GTTCAGAGTT CACTTGGAAT GATTGTGTCT CTATGAATAT GCGTAAACTT
TCAGTTTGGG AAATGTTTGT TCAAGAGACT TTATTATGGG GTGATCGTGG
TGTTGATGGT ATTCGTATAG ATAGTGCTCA TACATGTCCA TTGTTATTCA
GATCGAATTT GGATGAAATG TATCGTTTGG ATAGTGATGA TTTACCACAT
TATACCAATC AACAAATCTT TGAGGGTGAA ATCGTTATGA AACCATCGGA
AGAAGGTAAA AACTTTGGCT ATTGGGGTAC AACACCACCC TCACCAAAAC
ATTCAACTCC TTTCTATCCA AATCCAATTT TCATTAAAAT GACCAGAGAG
GTTTGGAATC GTTTCCCACA ATTTGTATTT CTTGCTGAAG TTTATTGGGA
TCGTGAATTA CATTCAATCA TTTCAGGTTT AGTGCCCTAT TCTTCTGCAA
TTCCAAAAGC ATTGGCATCG GTTTTCGATA AAGGTATCAG TAAAGATGGT
ATTGTTTTCG ATTTAAGACA ACGTCAATCA GTAAAAGCAC TCTATGATTA
TTATGAAATG CGTATGTCAA CTTATCCACA AAATTCAATT ATTCTCTATC
CATCATCGAC TCATCACTCT CCATATCCAT TACAAATTTA CAATGCTGGT
GCGTGGGCTG CCGTCGATCT TATGTATTTC CTACCGGAAA TTCCAATTAC
CTATATTGGT GAACAAAATG GTTGGTACTA TCATGTTGAT ATTCATACAA
GTCGTGTAAA AGTTGGTATG TCTGCAACAC CCTATCAATT ACAATATCCT
CAAATTCGTG GTCATTATGC TCATCGGGTG GCACTTAGAA AATCTCATGC
TTTATTACGT CGTGGTGGTA TGATTCCATT GTTATGTTAC CATGCAACCG
GATGGCATGA TCGTGTATTT GGTTTCGCAC GTTTCTCTGG TAATGAAGTT
GCAATCATTG CAATCAACTT TGACAATACC GACACGGAAT TCTATGTCGA
TTGTTCACCA TTGGCAAAGA TTTGTTCAGA TGATACAATC TATAGAATGG
TGGATTTAAT TAATCCAAGT AATCCACCAC AATATTTATC ATTGAACGAA
CTACTTCATG AAAAACATTT TGTAGTTGTA CCAGGTTATT CAAGTATTTG
TTGGGGTATT TATCATCAAG TTGGTTCACC TGCCGCAATG AGAGTACTCT
ATGAACATTC AATGACTCGT CTAAAACAAT TGTTAGCAGA TGATGTAGAT
CCATCAAATA ATTTAATTTA TTCACTTATT AAAAAGAGTT TATCATCAAT
TGAAGAATTT GGTAAAACTC TTGAAAATAT CTTATCAAAT CTATCAGGTA
ATACTGAAAA AACATTTAGT AGTTTTGTTC AATCAGTACT TTACACCTTA
ACCAAAACCT TTGATGGTGC AACCATATTA CAATATTTGG ATGTTTTATC
AAAGAAATCT ACTCAGTCAC CAAAAATTCC AAAGATTTGT CGTGAAATTT
TACAACATAA TACATTGGGT CCGATTGTAT TTGTAACACC AGAGATTGGT
CGTTTCTCAA CAGTTGGTGG TGTTGGTGTA ATGTTGGATG AATTAACAAG
AAGTTTGCAG TTGTTAGGTT GTGAAGTTCA TATTATTTCA CCTTATTATA
ACTATGGTAA AGGTGGTAGA ACTGGTTATT TAGAAAAGGA AGAAGGTATT
CGTTGGAAGA GAAATGTTTT AACCCTATGT TGGACCAGAT CGTGTTGAAG
TTGGTGTTCA TGAAGGTATG GATAAAGGTA TTCATTTACA CTTTTTACAT
CATTTCGAAT ACTTCCCAAC ACCCTATAAC TCTGGTTCAC CAATTCATCA
ACTTAAAACC ATTGTATTAT TTGCAAAAGC ATCATTGGAA TTACTTTGTC
AATTAAGAAT TTTACCATCA GTTGTTGTAA CCAATGATTG GTTCACTGGT
TTAGTTCCAG GTTATGCAAA ATCGGGTGCA TTTGGTACCA CTTTCAATGG
TACTACATTC TTCCATTTGG TACATAATCT TGAAGAAGCT TATCAAGGTA
GAATTTATCC TGATAGTGGC GACGATTTAA ATTGGATTCA TCATCTTCAT
CGTGAATTGA TCGTTGATCC ATATTCACAT CAACTTTGTT TGAATGCATC
AAGATGTGCC TTGTTAACTT GTAATAATTG GGGTACCGTA TCCAAATCTT
ATCTCTATGA TCTATTAAGA ACCAGTCATT TAGCAAATCT TTTACATAGA
TTCCCTGAAG CATTTGCTCA TTCCAATGGT ATTAGAGTAA AAGAAAGAAA
ACAAGCAATG AAAGCAGTTT CCACCGATCA TTGGAGTGCA AAGGCAGAGC
TACAAAAGAA ATATTTTGGA TTGGTCGATA AATCAATACC AGTACTTAGT
TTTTGTTGGT AGAATTGTAT TACAAAAGGG TGTTCATTTA ATTTTGAATG
CCGTTAGAGA ATTGATTGGT CATTATCAAG GTAAAATTCA AATTTTAATT
GGTGGTATGG CAAATATGAA AGATCCCTAT GCAAGTAGTT GTGCTTGGTC
AATGCAAGCA TTGTGTAAAC AATTCCCACA ATCATTTTGG GCTGACCCTG
ATTCATTCTT TTCAGATGGT CCATTGGTTA ATTTAGGCTC AGATTTTGGT
TTAATGCCTT CATTATTTGA ACCAAGTGGT GTTGTACAAC AAGAATACTT
TGTTGCTGGT ACACCAGTTA TCGCTTTCAA AACTGGTGGT CTAAAAGATA
CAGTTTTCGA ATATAATACC AACACTGAAA CTGGAAATGG TTTCACTTTT
GAAGCTCATA AACATACAGA TTACGTTCAA GCCGTTCATC GTGCCATCAA
TATTTTCAAT AACACTCATC ATTATGAAAA AATTCGTAAA TGTGCTGAAG
AATCAGTTTT AGATATGTCT GTTGTTGCTG AAGCTTGGGC AAAAGAATTC
TCAAGAATGA GAAGATCAAT TTGGTCAACC AATCATCAAT TACAAAGACT
TAATGAAAAA CAATCTACTG AGGTTATTGA TAATAGAGAT AATCATTCAT
CATCAACTCA ACCGTTAAAT TCTCAAATTA AACAACCACC ACAACAATAA
AAAAAAAATA ATAAAAAAAT AGAATTAATA AATAATTATT AAAATCTTAA
TCAAAAATTG AATTCAGGAA TTGCATTTGC CTTTCAAAAT AAAAAATAAA
ATAAAAATAA AATAAAAAAA AATTAAA

Translated Amino Acid Sequence Contig-U13021-1

CWPTGNVVVVDDNDISNGINLEIKQILLTEQSAGRLDHYLESKLVTSIHNRLLNIIESKT
NEWVEPIYNYWIKSVDIEYHNEITNSFQNFIQEFNSHIWDNRKYQAFLNRIVNLRRQFPP
PPSSSHQPAPNTPALLTTTKGIPIPIQKNSQQEEIEMSKIFKQLELDIIYLISVQHYYSL
KYIEKLLIGTMGHTSADVRQSSVRLLNVIYDSHTWQFEEPLKPVIRVIGDAFRIELELDQ
PLPENVLKRIYITTVQPPTQRLTNFKSSTIKIGGTYGKNKQNLQSSSAIFTKHKPKVDGC
KLYIDLPSFYRAGYYDWRVVELKSNGKFVSFDFETFKLKSSKDENYKQTDSASSSSSSIN
DNQPMISDENEKIQGRFIVHPKLREEIMHEVWVDLQDSIWDPYRGEMTKKGRIQNLIDAL
DHYHQEGITTLYVMGLLEKLPSNQPLCPTDRDLANRLIGGDQMFSQLVNRAKQLGIKIVI
DSTTRLSSKAAHRKYKGVVCHTLDNNGQLSRLEGTDSSEFTWNDCVSMNMRKLSVWEMFV
QETLLWGDRGVDGIRIDSAHTCPLLFRSNLDEMYRLDSDDLPHYTNQQIFEGEIVMKPSE
EGKNFGYWGTTPPSPKHSTPFYPNPIFIKMTREVWNRFPQFVFLAEVYWDRELHSIISGL
VPYSSAIPKALASVFDKGISKDGIVFDLRQRQSVKALYDYYEMRMSTYPQNSIILYPSST
HHSPYPLQIYNAGAWAAVDLMYFLPEIPITYIGEQNGWYYHVDIHTSRVKVGMSATPYQL
QYPQIRGHYAHRVALRKSHALLRRGGMIPLLCYHATGWHDRVFGFARFSGNEVAIIAINF
DNTDTEFYVDCSPLAKICSDDTIYRMVDLINPSNPPQYLSLNELLHEKHFVVVPGYSSIC
WGIYHQVGSPAAMRVLYEHSMTRLKQLLADDVDPSNNLIYSLIKKSLSSIEEFGKTLENI
LSNLSGNTEKTFSSFVQSVLYTLTKTFDGATILQYLDVLSKKSTQSPKIPKICREILQHN
TLGPIVFVTPEIGRFSTVGGVGVMLDELTRSLQLLGCEVHIISPYYNYGKGGRTGYLEKE
EGIRWKRNVLTLCWTRSC*swcs*ryg*rysftlftsfrilpntl*lwftnsst*nhcii
cksiigitlsiknftisccnq*lvhwfssrlckigciwyhfqwyyilpfgt*s*rslsr*
nls**wrrfkldsssss*idr*siftstlfecikmclvnl**lgyriqilsl*siknqsf
sksft*ip*sicsfqwy*skrkktsnessfhrsleckgratkeifwigr*intst*fllv
elyykrvfi*f*mplen*lviikvkfkf*lvvwqi*kipmqvvvlgqckhcvnnshnhfg
ltlihsfqmvhwli*aqilv*clhylnqvvlynkntlllvhqlslsklvv*kiqfsniip
tlklemvsllkliniqitfkpfivpsifsitliimkkfvnvlknqf*icllllklgqkns
qe*edqfgqpiinykdlmknnllrlliieiiihhqlnr*ilklnnhhnnkkkiikk*n**
iiikilikn*iqelhlpfkiknkikik*kkik

Homology Contig-U13021-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13021-1 (Contig-U13021-1Q) /CSM_Contig/Conti...  7041  0.0
Contig-U13758-1 (Contig-U13758-1Q) /CSM_Contig/Conti...    50  2e-05
Contig-U10976-1 (Contig-U10976-1Q) /CSM_Contig/Conti...    48  9e-05
Contig-U12535-1 (Contig-U12535-1Q) /CSM_Contig/Conti...    46  4e-04
Contig-U14441-1 (Contig-U14441-1Q) /CSM_Contig/Conti...    44  0.001
Contig-U12074-1 (Contig-U12074-1Q) /CSM_Contig/Conti...    44  0.001
Contig-U13673-1 (Contig-U13673-1Q) /CSM_Contig/Conti...    42  0.006
Contig-U12422-1 (Contig-U12422-1Q) /CSM_Contig/Conti...    42  0.006
Contig-U12127-1 (Contig-U12127-1Q) /CSM_Contig/Conti...    42  0.006
Contig-U10752-1 (Contig-U10752-1Q) /CSM_Contig/Conti...    42  0.006

Homology Contig-U13021-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ446248) Dictyostelium discoideum cDNA clone:ddv62j04, 3' ...  1608   0.0    1
(BJ442543) Dictyostelium discoideum cDNA clone:ddv50p06, 3' ...  1530   0.0    1
(BJ446262) Dictyostelium discoideum cDNA clone:ddv62m05, 3' ...  1378   0.0    2
(BJ445951) Dictyostelium discoideum cDNA clone:ddv61m02, 3' ...  1378   0.0    2
(BJ438989) Dictyostelium discoideum cDNA clone:ddv39h03, 3' ...  1378   0.0    2
(BJ437058) Dictyostelium discoideum cDNA clone:ddv33f03, 3' ...  1378   0.0    2
(BJ437017) Dictyostelium discoideum cDNA clone:ddv32n20, 3' ...  1378   0.0    2
(BJ375931) Dictyostelium discoideum cDNA clone:ddc20g13, 3' ...  1378   0.0    2
(BJ357440) Dictyostelium discoideum cDNA clone:dda63f18, 3' ...  1378   0.0    2
(BJ352055) Dictyostelium discoideum cDNA clone:dda45b13, 3' ...  1378   0.0    2

Homology Contig-U13021-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116979_75(AC116979|pid:none) Dictyostelium discoideum chromoso...  2093   0.0
CP001348_1848(CP001348|pid:none) Clostridium cellulolyticum H10,...    53   5e-17
CT573071_223(CT573071|pid:none) Kuenenia stuttgartiensis genome ...    50   2e-13
AP009179_1269(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic ...    49   6e-12
(A9NFK6) RecName: Full=Glycogen synthase;          EC=2.4.1.21; ...    47   6e-11
CP000975_2349(CP000975|pid:none) Methylacidiphilum infernorum V4...    44   2e-10
AP008971_1036(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA...    47   3e-10
EF667961_1(EF667961|pid:none) Manihot esculenta starch synthase ...    46   3e-10
(Q31IB5) RecName: Full=Glycogen synthase;          EC=2.4.1.21; ...    61   6e-10
BT070342_1(BT070342|pid:none) Picea sitchensis clone WS02721_E18...    40   1e-09