Homology Contig-U13007-1 vs Protein

Query= Contig-U13007-1 (Contig-U13007-1Q) /CSM_Contig/Contig-U13007-1Q.Seq.d
         (344 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM430496_3(AM430496|pid:none) Vitis vinifera contig VV78X061938....    32   9.1

>AM430496_3(AM430496|pid:none) Vitis vinifera contig VV78X061938.9,
           whole genome shotgun sequence.
          Length = 1636

 Score = 31.6 bits (70), Expect = 9.1
 Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
 Frame = +1

Query: 67  ILKSISSMGISNRKNSFSFVSTNSMIETNQNVNSVSKSG--YSKLIKGAALMAE 222
           + K++ ++G+S+ +   S+ S +SM +   NVN+  K    Y++++KG   M E
Sbjct: 129 LAKNLRALGVSSTEERNSYQSVSSMGKEESNVNTSEKESGSYAEVVKGKKGMEE 182

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 310,426,563
Number of extensions: 4179802
Number of successful extensions: 10089
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10075
Number of HSP's successfully gapped: 1
Length of query: 114
Length of database: 1,051,180,864
Length adjustment: 81
Effective length of query: 33
Effective length of database: 789,019,585
Effective search space: 26037646305
Effective search space used: 26037646305
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 28 (15.4 bits)