Homology Contig-U13007-1 vs DNA
Query= Contig-U13007-1 (Contig-U13007-1Q) /CSM_Contig/Contig-U13007-1Q.Seq.d
(344 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU074899) Dictyostelium discoideum slug cDNA, clone SSM402. 365 8e-97 1
(AU073219) Dictyostelium discoideum slug cDNA, clone SSG419. 365 8e-97 1
(C94110) Dictyostelium discoideum slug cDNA, clone SSG419. 355 7e-94 1
(BJ395682) Dictyostelium discoideum cDNA clone:dds39d22, 5' ... 347 2e-91 1
(BJ361157) Dictyostelium discoideum cDNA clone:ddc16a03, 5' ... 343 3e-90 1
(BJ383197) Dictyostelium discoideum cDNA clone:ddc52o01, 3' ... 248 5e-90 2
(BJ380460) Dictyostelium discoideum cDNA clone:ddc38a09, 3' ... 339 4e-89 1
(C84812) Dictyostelium discoideum slug cDNA, clone SSF894. 317 2e-82 1
(BJ374710) Dictyostelium discoideum cDNA clone:ddc16a03, 3' ... 242 2e-81 3
(BJ370114) Dictyostelium discoideum cDNA clone:ddc52o01, 5' ... 147 3e-31 1
(BX005235) Zebrafish DNA sequence from clone DKEY-68L7 in li... 50 0.057 1
(CT027683) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.057 1
(AC112644) Homo sapiens 3 BAC RP11-10O22 (Roswell Park Cance... 40 0.20 2
(AW332541) S9F11 AGS-1 Pneumocystis carinii cDNA 3', mRNA se... 40 0.83 2
(DU334704) 1098312088990 CHORI-243 Ovis aries genomic clone ... 46 0.90 1
(BG670904) DRNBID04 Rat DRG Library Rattus norvegicus cDNA c... 40 0.91 2
(AC152027) Dasypus novemcinctus clone VMRC5-12D21, WORKING D... 38 2.3 2
(BX171827) Danio rerio genomic clone DKEY-145M8, genomic sur... 36 2.8 2
(FN357293) Schistosoma mansoni genome sequence supercontig S... 44 3.5 1
(FC785434) CBGC15784.fwd CBGC Lottia gigantea 15h 18h embryo... 44 3.5 1
(FC690548) CAXX2137.rev CAXX Lottia gigantea from male gonad... 44 3.5 1
(FC560749) CAWF3457.fwd CAWF Lottia gigantea from mantle (H)... 44 3.5 1
(EV765789) AGENCOURT_109869035 NIH_MGC_420 Rattus norvegicus... 40 4.1 2
>(AU074899) Dictyostelium discoideum slug cDNA, clone SSM402.
Length = 240
Score = 365 bits (184), Expect = 8e-97
Identities = 184/184 (100%)
Strand = Plus / Plus
Query: 54 tattggaatgactattttaaaatcaatttcaagtatgggtatctctaacagaaagaattc 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tattggaatgactattttaaaatcaatttcaagtatgggtatctctaacagaaagaattc 71
Query: 114 attctcctttgtttctacaaacagcatgattgaaacaaatcaaaatgtaaactctgtttc 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 attctcctttgtttctacaaacagcatgattgaaacaaatcaaaatgtaaactctgtttc 131
Query: 174 caagtctggttattcaaaactaataaaaggtgccgctttaatggctgaaggaatttcagg 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 caagtctggttattcaaaactaataaaaggtgccgctttaatggctgaaggaatttcagg 191
Query: 234 tttc 237
||||
Sbjct: 192 tttc 195
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 283,220,573
Number of extensions: 17347914
Number of successful extensions: 1499215
Number of sequences better than 10.0: 23
Length of query: 344
Length of database: 106,710,029,556
Length adjustment: 23
Effective length of query: 321
Effective length of database: 104,212,228,590
Effective search space: 33452125377390
Effective search space used: 33452125377390
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
Dictyostelium discoideum cDNA Project Home