Dictyostelium discoideum cDNA Contig-U12898-1

Assembled

Chromosomal Location of Contig-U12898-1

Sequence Contig-U12898-1

CGGTGAATAC CTCGACTCCT AAATCGATGA AGACCGTAGC AAACTGCGAT
AATTCACTTG AATTGCAGCC TACTGGGATA GTTGAAATGT TGAACGCACA
TGATGACATC GGTCCTTTCG GATTAGGTGT TATACTTGGG TGAGAGTGGT
CAAAAAATTA ATTAACAAGT TTTTACAATG AGTACTACAA CTAATAAAAA
GCCAATTAGA GTTTATGTTG ATGGTTGTTT TGATTTAATG CATTTTGGAC
ATGCAAATGC ATTAAGACAA GCAAGAGAAT TAGGAGATAT TTTAGTAGTT
GGTGTACATA CAGATGAAGA AATTGCAAAA AATAAAGGTC CACCAGTTAT
GAATGAACAA GAAAGATATA AAGCAGTACG TGCATGTAAA TGGGCAGATG
AAGTTGCAGA AGGTGCACCT TATACTTTAA CTGAAGAATA TTTGGATAGT
TTAAACTGTG ATTTTTGTGT ACATGGTGAA GATATTTCAG TTGGTGCAGA
TGGTAAAGAT GTTTATGAAG GCATTAAAAA GAGTGGTAAA TTTAGATTCA
TCAAACGTAC TGAAGGTGTT TCAACAACCG AGTTGGTTGG TCGTATGTTA
TTATGCACCA AAGACCATCT TCAAAATGTT TCAGGTGAGC AAACCTCACC
ATTGGGAGGT GTCAATCCAA ACGTTTTACA CAAACAATCA CCATACACAA
GTTTATCACA TTTCCTCCCA ACCACCAGAA AGATCGTCCA ATTCTCAGAA
GGTCGTTCAC CAAAACCAAA CGATAAAATC ATTTATATGG ATGGTGGTTT
CGATTTATTC CATGTAGGTC ATACTGAGGC TTTGAAACAA GCAAGAGCAC
TCGGTGACTA TCTCATCGTT GGTGTTCATG ATGATAGAGT AGTTCACGAA
CAAAAAGGTA GCAACTTCCC AATTATGAAT TTACATGAAC GTGTACTCTC
TGTACTCTCA TGTCGTTATG TCGATGAAGT TGTCATTGGT GCTCCATTCA
GTGTCACCAA AGATATGATT GACTCACTTC ACATCAATGT TGTCGTTCAT
GGTGATGATC AAGTTGTACT CGGTCCAGAA GGTGGTGTAG ATCCATACAA
ACTCCCAAGA GAATTAGGTA TTTACAAAGA AGTTAAACAT ACTGAAGGTC
TCACTGCAAC TGAAATCGTT AAAAGAATCA TTGATAATAG ACTTCAATAT
GAAGCTCGTA ATCGTAAAAA AGAAGCAAAA GAAATTAATT TCATTGAACA
ATCAAATTAA AAAAAATTAA AAAATAAAAA ATAAAAATAA AACAAATAAA
AAAAAAAATA GAAAAAAAAT TTAATAAAAT CTTTAAGTGA CCCATCAAAT
CGATCTTAAC TTTTCTTTAT GAAAGAGAAA AAAA

Translated Amino Acid Sequence Contig-U12898-1

r*iprllnr*rp*qtaiihlncsllg*lkc*thmmtsvlsd*vlylgesgqkin*QVFTM
STTTNKKPIRVYVDGCFDLMHFGHANALRQARELGDILVVGVHTDEEIAKNKGPPVMNEQ
ERYKAVRACKWADEVAEGAPYTLTEEYLDSLNCDFCVHGEDISVGADGKDVYEGIKKSGK
FRFIKRTEGVSTTELVGRMLLCTKDHLQNVSGEQTSPLGGVNPNVLHKQSPYTSLSHFLP
TTRKIVQFSEGRSPKPNDKIIYMDGGFDLFHVGHTEALKQARALGDYLIVGVHDDRVVHE
QKGSNFPIMNLHERVLSVLSCRYVDEVVIGAPFSVTKDMIDSLHINVVVHGDDQVVLGPE
GGVDPYKLPRELGIYKEVKHTEGLTATEIVKRIIDNRLQYEARNRKKEAKEINFIEQSN*
kklknkk*k*nk*kkk*kknlikslsdpsnrs*lffmkekk

Homology Contig-U12898-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12898-1 (Contig-U12898-1Q) /CSM_Contig/Conti...  2492  0.0
Contig-U11677-1 (Contig-U11677-1Q) /CSM_Contig/Conti...   313  3e-85
Contig-U14527-1 (Contig-U14527-1Q) /CSM_Contig/Conti...   309  4e-84
Contig-U13298-1 (Contig-U13298-1Q) /CSM_Contig/Conti...   307  2e-83
Contig-U12673-1 (Contig-U12673-1Q) /CSM_Contig/Conti...   307  2e-83
Contig-U11262-1 (Contig-U11262-1Q) /CSM_Contig/Conti...   307  2e-83
Contig-U10919-1 (Contig-U10919-1Q) /CSM_Contig/Conti...   305  7e-83
Contig-U14524-1 (Contig-U14524-1Q) /CSM_Contig/Conti...   303  3e-82
Contig-U14116-1 (Contig-U14116-1Q) /CSM_Contig/Conti...   303  3e-82
Contig-U14096-1 (Contig-U14096-1Q) /CSM_Contig/Conti...   303  3e-82

Homology Contig-U12898-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ428867) Dictyostelium discoideum cDNA clone:ddv1c18, 3' e...  1425   0.0    2
(BJ372557) Dictyostelium discoideum cDNA clone:ddc13j06, 3' ...  1330   0.0    2
(BJ432289) Dictyostelium discoideum cDNA clone:ddv18c08, 3' ...  1312   0.0    1
(BJ431261) Dictyostelium discoideum cDNA clone:ddv13b17, 3' ...  1308   0.0    1
(BJ377283) Dictyostelium discoideum cDNA clone:ddc23k04, 3' ...  1296   0.0    2
(BJ359166) Dictyostelium discoideum cDNA clone:ddc13j06, 5' ...  1279   0.0    1
(BJ413234) Dictyostelium discoideum cDNA clone:ddv14a21, 5' ...  1259   0.0    1
(BJ432465) Dictyostelium discoideum cDNA clone:ddv18c23, 3' ...  1231   0.0    1
(BJ410469) Dictyostelium discoideum cDNA clone:ddv12m16, 5' ...  1227   0.0    1
(BJ412559) Dictyostelium discoideum cDNA clone:ddv9d05, 5' e...  1221   0.0    1

Homology Contig-U12898-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q55BZ4) RecName: Full=Ethanolamine-phosphate cytidylyltransfera...   731   0.0
AE014134_2379(AE014134|pid:none) Drosophila melanogaster chromos...   392   e-107
BT077764_1(BT077764|pid:none) Lepeophtheirus salmonis Pacific fo...   387   e-106
AK166319_1(AK166319|pid:none) Mus musculus mammary gland RCB-052...   387   e-106
AL663030_9(AL663030|pid:none) Mouse DNA sequence from clone RP23...   387   e-106
(Q5EA75) RecName: Full=Ethanolamine-phosphate cytidylyltransfera...   386   e-105
AY189524_1(AY189524|pid:none) Mus musculus CTP:ethanolaminephosp...   380   e-104
AM502250_130(AM502250|pid:none) Leishmania infantum chromosome 32.    377   e-103
BC088018_1(BC088018|pid:none) Xenopus tropicalis phosphate cytid...   375   e-102
AM494969_98(AM494969|pid:none) Leishmania braziliensis chromosom...   374   e-102