Dictyostelium discoideum cDNA Contig-U12889-1

Assembled

Chromosomal Location of Contig-U12889-1

Sequence Contig-U12889-1

CACTGTTGGC CTACTGGAAT TTAATTTTAT TAAATACTTT TATTATAAAA
AATAAATAAT GTCAACAACA ACAAATATTC AATTAAATAA TTTAACAGCA
ATTTCACCAA TTGATGGTAG ATATTGGGGA CAAGTTCAGG TATTAAGTGA
ATATTTTTCA GAGTATGCAT TAATTAAATA TCGTGTTCAA GTTGAAATTG
AATATTTCAT TGAATTAAGT AAACTTTCAG AATTGAAACC ATTGAATGCA
GTTAATAAGG AAGATGATCA TAAGAAACTT AGAGATATTT ATTTACAATT
TAAAGAGAGT GATGCACAAA AGATTAAACA AATTGAAAAA ACCACAAATC
ATGATATAAA AGCAGTTGAA TACTTTATCA AGGAGAAAAT GCATACAGAA
TTACAATATA GTGAAGTTGT TACAGAGTTT ATTCATTTCG GACTTACATC
ACAAGATATC AACAATACAG CCATACCATT ATCAATCGTT GAATCAGTTG
AGAAAGTATT AATTCCACAA TTGAAACAAT CAATCTTGGA ACCATTGCGT
CAATTTGCTC AACAATGGAA ATCAATTCCA ATGTTGGCAC GTACCCATGG
CCAACCAGCC ACACCAACCA CCGTCGGTAA GGAGCTAATG GTTTTCATCG
AACGTTTAGA GAACCAAATC AATCATTTGG AACAATCTGT ACCACATACT
TGTAAATTTG GTGGTGCAAC AGGTAATTTG AACGCACATA AAGTTTCATA
TCCAGCTATT GATTGGGTGG TATTCAGCGA GAAATTTGTT AAAGTTTTAC
ATCCATCTTT GAAACGTATG CGTTTTACCA CCCAAATTGA GCATTACGAT
AATGTTGCCT CCCTTTTGGA CGCTTTCAAA CGTATTAATA CAATTCTCAT
CGATTTATGT CGTGACATTT GGACCTACAT CTCTATGGAG TATTTCAATC
AAAAATTGGT CAAAGGTGAA GTCGGTAGTA GTACTATGCC TCACAAGGTA
AATCCAATCG ATTTTGAAAA TGCCGAAGGT AATATGGGTG TAGCCAATGC
ACTCTATGAA CATTTATCCG CTAAATTACC AATCTCCCGT CTTCAAAGAG
ATTTAACCGA CTCAACTGTA CTCCGTTCTA TTGGTGTACC TTTCTCACAT
TCTATCCTCT CCTTTAAATC AATTCAACGT GGTCTCTCAA AATTAGTACT
CAATGAAGCA AATATTGCAA AAGATCTCGA TGCAAATTGG GCTGTAGTTA
GTGAAGCAAT TCAAACTATC CTTCGTCGTG AAGGTTTCCC AAAACCATAT
GAAGCCTTAA AAGAATTAAC TCGTGTTAGT GGTAGTAAAA AAATTACTGA
ATCTGATATT CAAACTTTTA TCGATTCTTT ATCAATTCCT GATGATATTA
AATCTGAATT AAAACTTATT ACTCCTTTTA ATTATATTGG TATTATTCCT
GATTTTTAAA TAAAAAATAA AAAAATAAAA AAATAAAAAT AAAAAAAATA
AAAAATAAAT TAAAAAGACT ACTATTAAG

Translated Amino Acid Sequence Contig-U12889-1

tvgllefnfikyfyykk*IMSTTTNIQLNNLTAISPIDGRYWGQVQVLSEYFSEYALIKY
RVQVEIEYFIELSKLSELKPLNAVNKEDDHKKLRDIYLQFKESDAQKIKQIEKTTNHDIK
AVEYFIKEKMHTELQYSEVVTEFIHFGLTSQDINNTAIPLSIVESVEKVLIPQLKQSILE
PLRQFAQQWKSIPMLARTHGQPATPTTVGKELMVFIERLENQINHLEQSVPHTCKFGGAT
GNLNAHKVSYPAIDWVVFSEKFVKVLHPSLKRMRFTTQIEHYDNVASLLDAFKRINTILI
DLCRDIWTYISMEYFNQKLVKGEVGSSTMPHKVNPIDFENAEGNMGVANALYEHLSAKLP
ISRLQRDLTDSTVLRSIGVPFSHSILSFKSIQRGLSKLVLNEANIAKDLDANWAVVSEAI
QTILRREGFPKPYEALKELTRVSGSKKITESDIQTFIDSLSIPDDIKSELKLITPFNYIG
IIPDF*iknkkikk*k*kk*kin*kdyy*

Homology Contig-U12889-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12889-1 (Contig-U12889-1Q) /CSM_Contig/Conti...  2847  0.0
Contig-U10320-1 (Contig-U10320-1Q) /CSM_Contig/Conti...    50  7e-06
Contig-U13986-1 (Contig-U13986-1Q) /CSM_Contig/Conti...    48  3e-05
Contig-U13875-1 (Contig-U13875-1Q) /CSM_Contig/Conti...    48  3e-05
Contig-U10300-1 (Contig-U10300-1Q) /CSM_Contig/Conti...    48  3e-05
Contig-U13985-1 (Contig-U13985-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U13893-1 (Contig-U13893-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U13537-1 (Contig-U13537-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U11650-1 (Contig-U11650-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U12778-1 (Contig-U12778-1Q) /CSM_Contig/Conti...    40  0.007

Homology Contig-U12889-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ399797) Dictyostelium discoideum cDNA clone:dds7c18, 3' e...  1415   0.0    1
(BJ325836) Dictyostelium discoideum cDNA clone:dda2f14, 5' e...  1267   0.0    1
(BJ375877) Dictyostelium discoideum cDNA clone:ddc20j08, 3' ...  1235   0.0    2
(BJ346557) Dictyostelium discoideum cDNA clone:dda24f11, 3' ...  1225   0.0    2
(BJ344558) Dictyostelium discoideum cDNA clone:dda19a24, 3' ...  1211   0.0    3
(BJ325786) Dictyostelium discoideum cDNA clone:dda2c09, 5' e...  1209   0.0    1
(BJ432591) Dictyostelium discoideum cDNA clone:ddv19k05, 3' ...  1156   0.0    2
(BJ376400) Dictyostelium discoideum cDNA clone:ddc28j12, 3' ...  1148   0.0    2
(BJ431519) Dictyostelium discoideum cDNA clone:ddv14p10, 3' ...  1146   0.0    2
(BJ340332) Dictyostelium discoideum cDNA clone:dda12k13, 3' ...  1136   0.0    3

Homology Contig-U12889-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54J34) RecName: Full=Adenylosuccinate lyase;          Short=AS...   920   0.0
CU207366_1075(CU207366|pid:none) Gramella forsetii KT0803 comple...   541   e-152
CP000139_1577(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,...   528   e-148
AP010656_568(AP010656|pid:none) Candidatus Azobacteroides pseudo...   528   e-148
AP006841_4011(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,...   528   e-148
AP009380_1220(AP009380|pid:none) Porphyromonas gingivalis ATCC 3...   515   e-144
AL389894_46(AL389894|pid:none) Leishmania major Friedlin chromos...   479   e-133
AM494941_49(AM494941|pid:none) Leishmania braziliensis chromosom...   474   e-132
AM502222_45(AM502222|pid:none) Leishmania infantum chromosome 4....   470   e-131
BX571868_137(BX571868|pid:none) Photorhabdus luminescens subsp. ...   456   e-126