Dictyostelium discoideum cDNA Contig-U12870-1

Assembled

Chromosomal Location of Contig-U12870-1

Sequence Contig-U12870-1

TTTTTTTTTT ATAAAATTTT ATTAAATTAA AAAAAGAATG AATCAAGCCG
TAGCAGAATC AATTAATAAA TCATTAAAAT CTTCAACAGC AGATTATACC
CCAAAAGGAT ATCATATTAC CGAATTAGAA TCTGATTCAA TTTATTTAGA
TGAACATTTT TCAGGTAATG CAAAGATTTT CCATAATCCA GCAGTAGCAG
TATTATATGA ACAAGCATTG GCATTTGAAC ATGGATCAGC AATTACAAGT
ACAGGTGCAT TGGTAACCAG ATCAGGTGTA AAGACTGGAA GATCACCAAA
GGATAAGAGA ATTGTAAAGG AACCATCATC ACAAGATGAT ATTTGGTGGG
GACCAGTCAA TATTGCAATG GATGATCTTT CATTTATGAT CAATCGTGAA
AGAGCCATCG ATTATTTGAA CACTCAAGAA AAGATCTACG TTATCGATGG
TTACGCAGGA TGGGATCCAA AATATCGTAT CAAGGTTAGA GTCATTTGCG
CACGTGCCTA CCATGCTCTC TTTATGCACA ATATGTTAAT TCGTCCAGCC
AATAGAGAAG AGTTAAGAAA TTTTGGAGAA CCAGATTACA CCATTTACAA
TGCAGGTCAA TTCCCAGCAA ATCGTTACAC TAAGGGTATG TCTTCAAGCT
CATCAATCGC CATTGATTTC GCTCGTAAGG AAATGGTTAT TTTGGGTACT
CAATACGCTG GTGAAATGAA AAAAGGTATT CTCACCATCA TGATGTATCT
CATGCCAAAG ATGGGTGTCT TACCATTACA TTCCTCTTGC AATCAAGCTC
GTAACAATGG TGATACCACA TTATTCTTTG GTCTCTCTGG TACTGGTAAA
ACTACATTAT CCGCCGATAT TAACCGTGAA TTAATTGGTG ATGATGAACA
TGTTTGGACC GATACTGGTT GTTTCAATAT CGAAGGTGGT TGCTATGCAA
AATGTATCGA TCTCTCTCGT GAAAAGGAAC CAGAGATCTT TGATGCCATC
AAGTTTGGTG CTGTTTTAGA GAATGTCGTC TACAATGAGT ACTCTCGTAA
GGTCGATTAC AATGATGTCT CTATCACTGA GAACACCCGT TGTGCCTACC
CATTGGAACA TATCCCAAAT GCCAAATTCC CAGCTATTGC CGGTCATCCA
AAGAATATCA TTATGTTAAC TTGTGATGCT TTTGGTATTC TCCCACCAGT
ATCTCGTTTA GATGCCAATC AAGTTATGTA CCATTTCATT CAAGGTTATA
CCGCCAAAGT TGCCGGTACT GAAGTTGGTG TCACCGAACC AACTGCAACC
TTTTCAAGTT GTTATGGTGA ACCATTCATC GTATGGCATC CAACCAAATA
CGCTGAAATG TTGGCTTCTC AACTCCATAA ACATTCAGCT CGTGCTTGGT
TAATTAATAC TGGTTGGACT GGTGGTTCTC ATGGTGTTGG TTCTCGTATT
AAATTGGCCT ACACTCGTGC CATCATCGAT GCCATTCACA GTGGAGAACT
TGAAAAAATT CCAACCACTA AAATGGATGT TTTCGGTTTC CAAGTACCAA
ATAGTTGTCC AGGTGTTCCA TCTGAAATTT TAATGCCAAT TAATGGTTGG
GCTGATAAAG AGAAATATGT TTCAACTATG CATAAATTGG CTAAATTATT
TATTGAAAAT TTCAAAAAAT TCCAAGATAA AGCTTCACCA GAACTTGTAG
CAGCCGGTCC AATATTACCA CAATAAAAAA ATAAAAATAA AAATAAAAAC
CAAGAAAAGA GTGTATATTT TTTAAAACTC AAAGGAAAAA AAATAAAATA
AAATAAAATA AAATAAAATA AAATAAAAGT AAATAAAAAA AAAAAAATTA
AATTTAAAAA AAAAGTTAAA CATAAAACAA AAATAGNATA TAAAAA

Translated Amino Acid Sequence Contig-U12870-1

fffikfy*IKKRMNQAVAESINKSLKSSTADYTPKGYHITELESDSIYLDEHFSGNAKIF
HNPAVAVLYEQALAFEHGSAITSTGALVTRSGVKTGRSPKDKRIVKEPSSQDDIWWGPVN
IAMDDLSFMINRERAIDYLNTQEKIYVIDGYAGWDPKYRIKVRVICARAYHALFMHNMLI
RPANREELRNFGEPDYTIYNAGQFPANRYTKGMSSSSSIAIDFARKEMVILGTQYAGEMK
KGILTIMMYLMPKMGVLPLHSSCNQARNNGDTTLFFGLSGTGKTTLSADINRELIGDDEH
VWTDTGCFNIEGGCYAKCIDLSREKEPEIFDAIKFGAVLENVVYNEYSRKVDYNDVSITE
NTRCAYPLEHIPNAKFPAIAGHPKNIIMLTCDAFGILPPVSRLDANQVMYHFIQGYTAKV
AGTEVGVTEPTATFSSCYGEPFIVWHPTKYAEMLASQLHKHSARAWLINTGWTGGSHGVG
SRIKLAYTRAIIDAIHSGELEKIPTTKMDVFGFQVPNSCPGVPSEILMPINGWADKEKYV
STMHKLAKLFIENFKKFQDKASPELVAAGPILPQ*knknknknqeksvyflklkgkkik*
nkik*nkikvnkkkkikfkkkvkhktkixyk

Homology Contig-U12870-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12870-1 (Contig-U12870-1Q) /CSM_Contig/Conti...  3356  0.0
Contig-U10692-1 (Contig-U10692-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U14136-1 (Contig-U14136-1Q) /CSM_Contig/Conti...    34  0.53
Contig-U13360-1 (Contig-U13360-1Q) /CSM_Contig/Conti...    34  0.53
Contig-U12836-1 (Contig-U12836-1Q) /CSM_Contig/Conti...    34  0.53
Contig-U12701-1 (Contig-U12701-1Q) /CSM_Contig/Conti...    34  0.53
Contig-U12070-1 (Contig-U12070-1Q) /CSM_Contig/Conti...    34  0.53
Contig-U11807-1 (Contig-U11807-1Q) /CSM_Contig/Conti...    34  0.53
Contig-U11753-1 (Contig-U11753-1Q) /CSM_Contig/Conti...    34  0.53
Contig-U11642-1 (Contig-U11642-1Q) /CSM_Contig/Conti...    34  0.53

Homology Contig-U12870-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ346257) Dictyostelium discoideum cDNA clone:dda30j10, 3' ...  1473   0.0    1
(AU060917) Dictyostelium discoideum slug cDNA, clone SLC233.     1453   0.0    1
(BJ398162) Dictyostelium discoideum cDNA clone:dds11d10, 3' ...  1382   0.0    1
(BJ372643) Dictyostelium discoideum cDNA clone:ddc13c17, 3' ...  1380   0.0    1
(BJ346414) Dictyostelium discoideum cDNA clone:dda30h19, 3' ...  1374   0.0    1
(BJ341663) Dictyostelium discoideum cDNA clone:dda7k13, 3' e...  1362   0.0    1
(BJ373492) Dictyostelium discoideum cDNA clone:ddc3f09, 3' e...  1334   0.0    1
(BJ399556) Dictyostelium discoideum cDNA clone:dds6a18, 3' e...  1328   0.0    1
(BJ376565) Dictyostelium discoideum cDNA clone:ddc29g04, 3' ...  1271   0.0    1
(BJ328993) Dictyostelium discoideum cDNA clone:dda30j10, 5' ...  1227   0.0    2

Homology Contig-U12870-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AB075548_1(AB075548|pid:none) Toxoplasma gondii pck mRNA for pho...   687   0.0
(Q6FRR0) RecName: Full=Phosphoenolpyruvate carboxykinase [ATP]; ...   685   0.0
AY049067_1(AY049067|pid:none) Emericella nidulans phosphoenolpyr...   684   0.0
AP007155_153(AP007155|pid:none) Aspergillus oryzae RIB40 genomic...   684   0.0
CU633895_124(CU633895|pid:none) Podospora anserina genomic DNA c...   683   0.0
AE017349_359(AE017349|pid:none) Cryptococcus neoformans var. neo...   683   0.0
(Q9T074) RecName: Full=Phosphoenolpyruvate carboxykinase [ATP]; ...   682   0.0
FM992695_19(FM992695|pid:none) Candida dubliniensis CD36 chromos...   682   0.0
FJ826618_1(FJ826618|pid:none) Epichloe festucae strain E2368 pho...   681   0.0
AB050473_1(AB050473|pid:none) Flaveria pringlei pck3-11 mRNA for...   680   0.0