Dictyostelium discoideum cDNA Contig-U12862-1

Assembled

Chromosomal Location of Contig-U12862-1

Sequence Contig-U12862-1

ATTGAAGAAT CAATTCCAGA ATATATTGAN CAAAAGTTAA AAATAAAATG
TTTAAGAGTA TTTGGTCAAA GTGAAATTGG CGTAACTTCA TTTATTAGTG
TCCATGCTTT AAATATTCCT TATAGAGCCA CTGGCGTACC ATCAATTTAT
ATTAGACCAT CAATACTTTC AGAAGAAGGT GAAGTTTTGA ATTCAAATGA
AATTGGTTTA GTTGCATTTA AACTACCAAT GCCTCCCAGT TTTACAATTA
CATTTTATAA AAATGATGAA AAGTTTAAAC AACTATTTAC AAGATTTCCA
GGTTACTACG ATTCAGGTGA TTTAGGTTAT AAAGATCAAA GAGGATTTTA
TACAATTGTT TCAAGATCAG ATGATCAAAT TAAGATAGGT TTTAATAAAA
TTCAATTAAA TACAATTGAC ACATCAATTT TAAAACATCC ATCAGTTTTA
GAATGTTGTT CTATTGGTAT TTTAANNNCA GATTGCCATA CTGCACCGAT
TGGTATATTG GTATTAAAAG AAAATCCATC AATTGATTTA AATAAATTAC
AAAATGAAAT TAATAATATC AAATTTATTA AATGATCCAA ACTATCAATT
ACCAGACGAT GTCAATGACT CTGAACTAAN TTATAAAATC AAAGAGTTAT

Translated Amino Acid Sequence Contig-U12862-1

IEESIPEYIXQKLKIKCLRVFGQSEIGVTSFISVHALNIPYRATGVPSIYIRPSILSEEG
EVLNSNEIGLVAFKLPMPPSFTITFYKNDEKFKQLFTRFPGYYDSGDLGYKDQRGFYTIV
SRSDDQIKIGFNKIQLNTIDTSILKHPSVLECCSIGILXXDCHTAPIGILVLKENPSIDL
NKLQNEINNIKFIK*sklsitrrcq*l*txl*nqrv

Homology Contig-U12862-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12862-1 (Contig-U12862-1Q) /CSM_Contig/Conti...  1259  0.0
Contig-U11360-1 (Contig-U11360-1Q) /CSM_Contig/Conti...  1021  0.0
Contig-U13580-1 (Contig-U13580-1Q) /CSM_Contig/Conti...   157  2e-38
Contig-U12940-1 (Contig-U12940-1Q) /CSM_Contig/Conti...   157  2e-38
Contig-U12439-1 (Contig-U12439-1Q) /CSM_Contig/Conti...   100  4e-21
Contig-U11930-1 (Contig-U11930-1Q) /CSM_Contig/Conti...    74  2e-13
Contig-U08553-1 (Contig-U08553-1Q) /CSM_Contig/Conti...    58  1e-08
Contig-U10410-1 (Contig-U10410-1Q) /CSM_Contig/Conti...    42  7e-04
Contig-U00886-1 (Contig-U00886-1Q) /CSM_Contig/Conti...    42  7e-04
Contig-U13317-1 (Contig-U13317-1Q) /CSM_Contig/Conti...    40  0.003

Homology Contig-U12862-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ373595) Dictyostelium discoideum cDNA clone:ddc3g22, 3' e...   991   0.0    2
(BJ385744) Dictyostelium discoideum cDNA clone:ddc56c01, 3' ...   991   0.0    3
(AU037827) Dictyostelium discoideum slug cDNA, clone SSE344.      345   e-118  2
(AU074693) Dictyostelium discoideum slug cDNA, clone SSL566.      272   2e-68  1
(BJ374664) Dictyostelium discoideum cDNA clone:ddc9o18, 3' e...   264   4e-66  1
(BJ379839) Dictyostelium discoideum cDNA clone:ddc36l04, 3' ...   254   4e-63  1
(BJ361075) Dictyostelium discoideum cDNA clone:ddc9o18, 5' e...   182   1e-41  1
(BJ438197) Dictyostelium discoideum cDNA clone:ddv36m14, 3' ...   145   1e-38  2
(BJ446043) Dictyostelium discoideum cDNA clone:ddv61p07, 3' ...   145   1e-38  2
(BJ372252) Dictyostelium discoideum cDNA clone:ddc11i22, 3' ...   157   1e-37  2

Homology Contig-U12862-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116984_184(AC116984|pid:none) Dictyostelium discoideum chromos...   325   1e-90
AC116984_182(AC116984|pid:none) Dictyostelium discoideum chromos...   263   2e-75
AC116984_181(AC116984|pid:none) Dictyostelium discoideum chromos...   268   8e-71
AC116984_173(AC116984|pid:none) Dictyostelium discoideum chromos...   238   3e-65
AC116984_175(AC116984|pid:none) Dictyostelium discoideum chromos...   230   5e-65
AC116984_172(AC116984|pid:none) Dictyostelium discoideum chromos...   230   3e-62
AC116984_174(AC116984|pid:none) Dictyostelium discoideum chromos...   194   2e-54
AC116984_180(AC116984|pid:none) Dictyostelium discoideum chromos...   144   3e-33
BA000040_1309(BA000040|pid:none) Bradyrhizobium japonicum USDA 1...   100   4e-20
CP000494_894(CP000494|pid:none) Bradyrhizobium sp. BTAi1, comple...    99   8e-20