<Clone: Contig-U12790-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U12790-1

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Assembled

Chromosomal Location of Contig-U12790-1

< more Chromosomal info >

Chromosome Number 2
Length 8467578
Start Poin 5,337,200
End Point 5,336,695
Strand MINUS

Sequence Contig-U12790-1

ATGTTTTTTT TGAAAAATAC ATATAGGGGC CTTGTTACTT CTATAATATT
CAAATTCAAA TATAGTATTC GTAGACTATA AAAACACCTG AATCAAAACT
TTTATTACAT TGTAGCAAAA GTTGTTCACT CATTGGAATA TTAATTTTAT
TGTTTAACAG CATTAAAATT AAATACAGTG GTTATATTTC TATAATACGA
AAGAAACAAA CAAAAAAGAA AGGAAAAGAA AAGAAAAAAA AAAAAAGAGA
GAAATTAATA GCGCAGATTA TAATATTTAT TATCAATCAA ACTTTTCTCA
TATTTTAGCT TTATACGCAA ATATCCCTTC AATAACAATA ACAACAAAAA
CTCAATTTAT AGCAAAAATT ATTTATTTTA CAAATCAAAA TTAATTCAAA
ACGATTTTTA GATTAATTAA CTTATAAATA TATGTCAGCT CCAAAACAAC
AAATTATTAA CAACAACAAC AACAAACCAC AACAATCCGA TCAAAACAAT
GAAG

Translated Amino Acid Sequence Contig-U12790-1

<All Frames> 
vffekyi*gpcyfyniqiqi*ys*TIKTPESKLLLHCSKSCSLIGILILLFNSIKIKYSG
YISIIRKKQTKKKGKEKKKKKREKLIAQIIIFIINQTFLIF*lytqislq*q*qqklnl*
qklfilqikinskrfld*ltykymsapkqqiinnnnnkpqqsdqnne


Homology Contig-U12790-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U12790-1 (Contig-U12790-1Q) /CSM_Contig/Conti...   371  e-103
Contig-U14738-1 (Contig-U14738-1Q) /CSM_Contig/Conti...    36  0.035
Contig-U13862-1 (Contig-U13862-1Q) /CSM_Contig/Conti...    34  0.14
Contig-U12722-1 (Contig-U12722-1Q) /CSM_Contig/Conti...    34  0.14
Contig-U10784-1 (Contig-U10784-1Q) /CSM_Contig/Conti...    34  0.14
Contig-U07854-1 (Contig-U07854-1Q) /CSM_Contig/Conti...    34  0.14
Contig-U05410-1 (Contig-U05410-1Q) /CSM_Contig/Conti...    34  0.14
Contig-U04314-1 (Contig-U04314-1Q) /CSM_Contig/Conti...    34  0.14
Contig-U13902-1 (Contig-U13902-1Q) /CSM_Contig/Conti...    32  0.55
Contig-U13086-1 (Contig-U13086-1Q) /CSM_Contig/Conti...    32  0.55


Homology Contig-U12790-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ426233) Dictyostelium discoideum cDNA clone:ddv58f12, 5' ...   371   2e-98  1
(BJ337642) Dictyostelium discoideum cDNA clone:dda58n06, 5' ...   371   2e-98  1
(AU073014) Dictyostelium discoideum slug cDNA, clone SSF708.      339   3e-94  2
(DR180537) RTMNUT1_33_F11.b1_A029 Roots minus micronutrients...    50   0.086  1
(DR011976) HEAT1_9_E10.b1_A029 Root at 37 C for 24 hr Pinus ...    50   0.086  1
(CO159472) FLD1_13_G02.g1_A029 Root flooded Pinus taeda cDNA...    50   0.086  1
(CF477322) RTWW3_7_A11.b1_A022 Well-watered loblolly pine ro...    50   0.086  1
(BH928641) odh96c11.b1 B.oleracea002 Brassica oleracea genom...    48   0.34   1
(AC189241) Brassica rapa subsp. pekinensis clone KBrB016K20,...    32   0.47   5
(CT090875) Sus scrofa genomic clone PigE-107N15, genomic sur...    40   0.59   2


Homology Contig-U12790-1 vs Protein

<more Protein info> 





<Clone: Contig-U12790-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>





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