Homology Contig-U12790-1 vs DNA

Query= Contig-U12790-1 (Contig-U12790-1Q) /CSM_Contig/Contig-U12790-1Q.Seq.d
         (504 letters)

Database: ddbj_A
           108,600,042 sequences; 106,710,029,556 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ426233) Dictyostelium discoideum cDNA clone:ddv58f12, 5' ...   371   2e-98  1
(BJ337642) Dictyostelium discoideum cDNA clone:dda58n06, 5' ...   371   2e-98  1
(AU073014) Dictyostelium discoideum slug cDNA, clone SSF708.      339   3e-94  2
(DR180537) RTMNUT1_33_F11.b1_A029 Roots minus micronutrients...    50   0.086  1
(DR011976) HEAT1_9_E10.b1_A029 Root at 37 C for 24 hr Pinus ...    50   0.086  1
(CO159472) FLD1_13_G02.g1_A029 Root flooded Pinus taeda cDNA...    50   0.086  1
(CF477322) RTWW3_7_A11.b1_A022 Well-watered loblolly pine ro...    50   0.086  1
(BH928641) odh96c11.b1 B.oleracea002 Brassica oleracea genom...    48   0.34   1
(AC189241) Brassica rapa subsp. pekinensis clone KBrB016K20,...    32   0.47   5
(CT090875) Sus scrofa genomic clone PigE-107N15, genomic sur...    40   0.59   2
(AM627124) Entamoeba dispar GSS, clone dispar1b10.q1k.             36   0.94   2
(AM623564) Entamoeba dispar GSS, clone dispar100d09.q1k.           36   0.97   2
(AC226259) Oryza minuta clone OM__Ba0150I10, complete sequence.    46   1.3    1
(AC141665) Apis mellifera clone CH224-54J16, WORKING DRAFT S...    46   1.3    1
(AC236523) Oryza minuta clone OM__Ba0028H17, *** SEQUENCING ...    46   1.3    1
(AC215817) Oryza punctata clone OP__Ba0028L11, *** SEQUENCIN...    46   1.3    1
(EJ956715) 1093018975951 Global-Ocean-Sampling_GS-30-02-01-1...    46   1.3    1
(EJ925234) 1093018779384 Global-Ocean-Sampling_GS-30-02-01-1...    46   1.3    1
(EE130246) SiJWH11ABA Lausanne fire ant library Solenopsis i...    34   1.4    3
(AC134709) Rattus norvegicus clone CH230-408I8, *** SEQUENCI...    42   1.6    5
(AC174879) Strongylocentrotus purpuratus clone R3-1115M5, WO...    38   2.2    3
(AC127659) Rattus norvegicus clone CH230-157F9, WORKING DRAF...    42   2.3    5
(AC201126) Strongylocentrotus purpuratus clone R3-14A10, WOR...    38   2.4    5
(AL603788) Human DNA sequence from clone RP11-211O7 on chrom...    40   4.3    2
(AC171082) Bos taurus clone CH240-230H23, WORKING DRAFT SEQU...    38   5.1    2
(CR352237) Zebrafish DNA sequence from clone CH211-13I11 in ...    44   5.3    1
(AC159506) Mus musculus 6 BAC RP23-337N18 (Roswell Park Canc...    44   5.3    1
(AC156281) Mus musculus 6 BAC RP24-311B6 (Roswell Park Cance...    44   5.3    1
(AC118352) Rattus norvegicus clone CH230-353J23, *** SEQUENC...    44   5.3    1
(AC109990) Rattus norvegicus clone CH230-266D9, *** SEQUENCI...    44   5.3    1
(AC109710) Rattus norvegicus clone CH230-185H14, *** SEQUENC...    44   5.3    1
(FP074884) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   5.3    1
(CU914808) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   5.3    1
(CU856602) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   5.3    1
(DH531423) Rattus norvegicus DNA, BAC clone: RNB1-032H03, 3'...    44   5.3    1
(CT397514) Sus scrofa genomic clone CH242-481D23, genomic su...    44   5.3    1
(CC207492) CH261-65I16_Sp6.1 CH261 Gallus gallus genomic clo...    44   5.3    1
(BZ156098) CH230-312E7.TV CHORI-230 Segment 2 Rattus norvegi...    44   5.3    1
(AG116974) Pan troglodytes DNA, clone: PTB-124K19.R.               44   5.3    1
(AU266406) Dictyostelium discoideum vegetative cDNA clone:VS...    44   5.3    1
(FM249594) Caenorhabditis elegans EST, clone  E06_ce4.trans....    44   5.3    1
(AC232590) Brassica rapa subsp. pekinensis clone KBrH089C20,...    32   6.7    4
(AM470589) Vitis vinifera contig VV78X258052.13, whole genom...    38   6.9    3
(AM285309) Spiroplasma citri GII3-3X chromosome, contig Cont...    36   7.2    2
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    32   7.7    2
(AB267275) Rhagophthalmus ohbai mitochondrial DNA, complete ...    40   8.1    3
(EU100743) Cordyceps brongniartii isolate IMBST95031 mitocho...    38   8.7    3

>(BJ426233) Dictyostelium discoideum cDNA clone:ddv58f12, 5' end,
           single read.
          Length = 243

 Score =  371 bits (187), Expect = 2e-98
 Identities = 187/187 (100%)
 Strand = Plus / Plus


Query: 12  gaaaaatacatataggggccttgttacttctataatattcaaattcaaatatagtattcg 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12  gaaaaatacatataggggccttgttacttctataatattcaaattcaaatatagtattcg 71


Query: 72  tagactataaaaacacctgaatcaaaacttttattacattgtagcaaaagttgttcactc 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  tagactataaaaacacctgaatcaaaacttttattacattgtagcaaaagttgttcactc 131


Query: 132 attggaatattaattttattgtttaacagcattaaaattaaatacagtggttatatttct 191
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 attggaatattaattttattgtttaacagcattaaaattaaatacagtggttatatttct 191


Query: 192 ataatac 198
           |||||||
Sbjct: 192 ataatac 198

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 425,761,904
Number of extensions: 28294166
Number of successful extensions: 2469516
Number of sequences better than 10.0: 47
Length of query: 504
Length of database: 106,710,029,556
Length adjustment: 23
Effective length of query: 481
Effective length of database: 104,212,228,590
Effective search space: 50126081951790
Effective search space used: 50126081951790
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)