Dictyostelium discoideum cDNA Contig-U12742-1

Assembled

Chromosomal Location of Contig-U12742-1

Sequence Contig-U12742-1

CATTGGGTAA AGTTATTAAT GCATTGACAT GTGGTGCAAA CTATGTTCCA
TATCGTGATA GTAAACTCAC TAGAGTTTTA CAAGATTCAT TAGGTGGTAA
CTCAAAGACA TCACTAATCA TCAATTGTTC ACCAAGTAAT AACAATGAAC
ATGAAACCAT TACAACACTT CAATTTGGTA CACGTGCAAA AACCATTAAA
AATCAACCAA AGATTAACAA AAAAATCACA TATCATGAAT TAGAGTTATT
CATCATTAAA TTAGCTAAAG ATTTAGAGAA AAGTCGTAAA GAGTGTGAAG
AGATTACAAG AAGTAAAAAT TTAGAGATTA ATAATCTTTT AATTCAATTG
GAAAATAATC AAAAAATGGT TGTAGAAAGT AATCAAAAGT TAGAGTTATT
AAATAGTCAA ATTTCAAGTA ATCATTCATT TGATAATACT TTTAAAGAAA
TTGAAAATAC TTGTGAAAAT AGTAAAATCA TTTTTGATGA TTTAAATGAT
CATATTAATA ATAATAATAA TGTTGATAAT AATGATAATA ATAATAATGA
TAATAATAAC AATAATCAAT ATCAAGAAGA ATCAAATCAA TNNNNNNNNN

Translated Amino Acid Sequence Contig-U12742-1

LGKVINALTCGANYVPYRDSKLTRVLQDSLGGNSKTSLIINCSPSNNNEHETITTLQFGT
RAKTIKNQPKINKKITYHELELFIIKLAKDLEKSRKECEEITRSKNLEINNLLIQLENNQ
KMVVESNQKLELLNSQISSNHSFDNTFKEIENTCENSKIIFDDLNDHINNNNNVDNNDNN
NNDNNNNNQYQEESNQXXX

Homology Contig-U12742-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12742-1 (Contig-U12742-1Q) /CSM_Contig/Conti...   959  0.0
Contig-U06653-1 (Contig-U06653-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U14183-1 (Contig-U14183-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U10700-1 (Contig-U10700-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U03769-1 (Contig-U03769-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U05239-1 (Contig-U05239-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U03724-1 (Contig-U03724-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U01541-1 (Contig-U01541-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U13094-1 (Contig-U13094-1Q) /CSM_Contig/Conti...    34  0.17
Contig-U12683-1 (Contig-U12683-1Q) /CSM_Contig/Conti...    34  0.17

Homology Contig-U12742-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ335406) Dictyostelium discoideum cDNA clone:dda50h04, 5' ...   480   0.0    2
(U41289) Dictyostelium discoideum K7 kinesin-like protein mR...   480   0.0    2
(AY162212) Dictyostelium discoideum kinesin 1 gene, partial ...    50   2e-15  4
(AY484460) Dictyostelium discoideum kinesin family member 3 ...    50   2e-14  4
(AV290129) Mus musculus 10 days neonate intestine cDNA, RIKE...    60   1e-04  1
(BB047356) Mus musculus adult male medulla oblongata cDNA, R...    60   1e-04  1
(AL365319) Human DNA sequence *** SEQUENCING IN PROGRESS ***...    40   3e-04  2
(AC006101) citb_338_f_24, complete sequence.                       40   3e-04  2
(AL161932) Human DNA sequence from clone RP11-241I20 on chro...    40   3e-04  2
(GC700822) Sequence 16067 from patent US 6812339.                  40   3e-04  2

Homology Contig-U12742-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54TL0) RecName: Full=Kinesin-related protein 7; AltName: Full=...   285   5e-76
T18277(T18277) kinesin heavy chain - slime mold (Dictyostelium d...   284   2e-75
(Q54UC9) RecName: Full=Kinesin-related protein 3; AltName: Full=...   116   5e-25
CR382127_354(CR382127|pid:none) Yarrowia lipolytica strain CLIB1...   112   6e-24
AM920437_40(AM920437|pid:none) Penicillium chrysogenum Wisconsin...   110   2e-23
CU638744_486(CU638744|pid:none) Podospora anserina genomic DNA c...   109   5e-23
(P48467) RecName: Full=Kinesin heavy chain;  &L47106_1(L47106|pi...   109   7e-23
AP007174_351(AP007174|pid:none) Aspergillus oryzae RIB40 genomic...   108   1e-22
FM992688_1107(FM992688|pid:none) Candida dubliniensis CD36 chrom...   108   1e-22
T51932(T51932) kinesin [imported] - Haematonectria haematococca ...   108   1e-22