Dictyostelium discoideum cDNA Contig-U12737-1

Assembled

Chromosomal Location of Contig-U12737-1

Sequence Contig-U12737-1

TTTCACAAGA TTTCACTCAA GCTAAATGGA TCACTGCTGC AAATAAAAGT
GCATTCCTTT TACAAAGTAA ACATAAATAT GAATTGGCTG CTTCATTATT
CCTTTTAGCA GGTCAATTAA AGAAAGCTGT AAATCTTTTA TTACAAATGC
AAGGTGATTT CCAATTGGCA TTGGTTATCT CAAGATTGTA TGAAGGTGAG
AATGGCGAAT GTTCACGTAT GATCATTGAA GATCATATCA TACCACTTGC
AAAGAAAACT AATGATCGTA GTTTATTAAG TATTTGTAAT TGGTTATTGA
AAAAGTATGA AGATGCTATA ACATGTTTAA TACCATCAGT TTCAATAGAT
GGTGATAGAA AACTTGATGA AGATGATAAC AATCAACGTG GTGGTGGTGG
TGGTGGTTAT AGTTTAGGTG TTTCTGGTAA TTCAACACCA ATTGGTATGT
CTAGTCGTAA TTCAATGGTA TCATCACCAA TTAATAGATC AACCACTGGT
ACAAATTACT CAAATGCTAC AGGTACAACC TTAACCACTC AAGTGGTATC
ACCAATCTCT CAACAATTAC GTGCTTCTCA ATTAGGTCCT TCCATTTTAT
ATTTCTTCCG TTTCTTAAAG AATCATGTTC AATTACGTCA ATTATCAGAG
GATAAAAAGA AAGAAGATGA ATTCTTAAGA ACTAGTTCTT ACTCTTATTT
CAATAGTGGT TGTTCATTAT TAGCACTTGA AAATATTGAA AGATTAGAAG
CATCTCATCC AACCATTTTA ACTGATAATC AAGAACGTCA AGAAGTTGAA
AAATTAGAAA AATTAAAACA ACAACAACAA GAAAAAGAAA AAGAAAAAGA
AAGATTAGAA AAAGAAAAAC AAAAATCAAA TGATTTAGGT TTAGATTTTG
GTGGTGGTGG CGGTGGTAGT GGTTTCTTTA ATAAACCGTC ATATGATTTG
GGATTAGATT TTGGTAGTAC ACCATCAAAA CCATCGACTT CTTCATCTTA
TATGGGACTA GATTTCAATA CACCAACTCA ATCATCATCA TCAAATTCAA
ATAATTATGG TTTAGACTTT GGTAGTACAC CATCAAAACC AGAAAATTCA
TCATCAAATT ATATGGGATT AGATTTCAAT ACACCAAGTC AATCATCATC
TTCAAATAAT TATGGTTTAG ACTTTGGTGC ACCATCATCA ACCACCACCA
ATAATAATAA TAATAATAGT TGGGATTTCT TAGATAGTAA TAAACCAAAA
GAAGAATCAA TTAAAGNAGN ATNNAAGAAG AAA

Translated Amino Acid Sequence Contig-U12737-1

SQDFTQAKWITAANKSAFLLQSKHKYELAASLFLLAGQLKKAVNLLLQMQGDFQLALVIS
RLYEGENGECSRMIIEDHIIPLAKKTNDRSLLSICNWLLKKYEDAITCLIPSVSIDGDRK
LDEDDNNQRGGGGGGYSLGVSGNSTPIGMSSRNSMVSSPINRSTTGTNYSNATGTTLTTQ
VVSPISQQLRASQLGPSILYFFRFLKNHVQLRQLSEDKKKEDEFLRTSSYSYFNSGCSLL
ALENIERLEASHPTILTDNQERQEVEKLEKLKQQQQEKEKEKERLEKEKQKSNDLGLDFG
GGGGGSGFFNKPSYDLGLDFGSTPSKPSTSSSYMGLDFNTPTQSSSSNSNNYGLDFGSTP
SKPENSSSNYMGLDFNTPSQSSSSNNYGLDFGAPSSTTTNNNNNNSWDFLDSNKPKEESI
KXXXKKK

Homology Contig-U12737-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12737-1 (Contig-U12737-1Q) /CSM_Contig/Conti...   773  0.0
Contig-U13574-1 (Contig-U13574-1Q) /CSM_Contig/Conti...   502  e-142
Contig-U11253-1 (Contig-U11253-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U11144-1 (Contig-U11144-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U09280-1 (Contig-U09280-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U04046-1 (Contig-U04046-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U13938-1 (Contig-U13938-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11698-1 (Contig-U11698-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U09049-1 (Contig-U09049-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U14413-1 (Contig-U14413-1Q) /CSM_Contig/Conti...    40  0.006

Homology Contig-U12737-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ353104) Dictyostelium discoideum cDNA clone:dda49b06, 3' ...   767   0.0    3
(BJ445260) Dictyostelium discoideum cDNA clone:ddv58n24, 3' ...   650   0.0    4
(BJ357653) Dictyostelium discoideum cDNA clone:dda64c11, 3' ...   650   0.0    3
(BJ403737) Dictyostelium discoideum cDNA clone:dds26j01, 3' ...   634   0.0    6
(BJ437955) Dictyostelium discoideum cDNA clone:ddv35l21, 3' ...   502   e-163  4
(BJ428394) Dictyostelium discoideum cDNA clone:ddv11d20, 3' ...    44   0.002  2
(BJ431712) Dictyostelium discoideum cDNA clone:ddv15p06, 3' ...    44   0.003  2
(AC135766) Rattus norvegicus clone CH230-209P4, WORKING DRAF...    56   0.003  4
(AC123253) Rattus norvegicus 12 BAC CH230-230N7 (Children's ...    56   0.004  1
(AC091342) Rattus norvegicus clone CH230-1C20, WORKING DRAFT...    56   0.004  1

Homology Contig-U12737-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AL390189_15(AL390189|pid:none) Neurospora crassa DNA linkage gro...    92   4e-17
CU638743_492(CU638743|pid:none) Podospora anserina genomic DNA c...    89   3e-16
CR382129_625(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...    89   4e-16
(P47104) RecName: Full=Regulator of V-ATPase in vacuolar membran...    87   1e-15
CU928181_125(CU928181|pid:none) Zygosaccharomyces rouxii strain ...    87   1e-15
AE016818_284(AE016818|pid:none) Ashbya gossypii (= Eremothecium ...    85   5e-15
AM270169_35(AM270169|pid:none) Aspergillus niger contig An08c014...    80   2e-13
AP007161_426(AP007161|pid:none) Aspergillus oryzae RIB40 genomic...    80   2e-13
(Q9Y817) RecName: Full=Putative regulator of V-ATPase in vacuola...    80   2e-13
CU928180_589(CU928180|pid:none) Kluyveromyces thermotolerans str...    79   3e-13