Dictyostelium discoideum cDNA Contig-U12710-1

Assembled

Chromosomal Location of Contig-U12710-1

NO HIT FOUND.

Sequence Contig-U12710-1

AGGAAATTCC CATCGGAAAT TGCTTTTGTC AATTTCTACA TTGAATTTCT
AACCAATCTA AATGAAGAAA ACAATACAAG AGTACTCTTT GAGAAGCTAT
TAACTTGGCC ATCATTGGAG AAATCGGAAT CAATTTGGAG AAAATTCTTA
GATTTTGAAT ATCGTCAAAA TCAAGATGTT TCATCAATTC TAAAGTTAGA
GAAACGTTAT CAAGTGACTG TAAATTCAAA TACCGATAAA TCTGGTGTAC
TTCAAGCATT GAATAGATAT AAATTTTTAA ATCTTTGGAG TTGTCATCCA
ACTGAAATTG AAATCATTAC AAAGAATATC TTGGATGATC ATTCAGATCA
AAATAAAGAT GATCATCATT CTCATTCTCA TGCTCATCAT CATCCCCCTC
ATTCACGTCA TAATGCAAAT AAAGATTCAA CTGAAAAAGA CCAAGGAGCT
ATTGATGGTA AAGAAGGAGC AGTAGCTGCT AAACTTCATA AAAAAGGTAA
AGGTAAAGAA ATTAAACCAG TACCACAAAT TGAATCAAAA CCAACTTTTT
CAACAATTAT ACCTACTTCA AATTGGAAAG TAAAAAAACC AGATATAACT
CAAATGGTAC CTTTTCGTGG TGAAATTGGT AAATTCACTC AATCAAGTGT
AGTTTCAATA CCGCAACAAC AACAACAGCA ACAGCAACCA ACACCAATAT
CATCACAACC AATATCACAA CAACAACAAC AACAACAACA GCAACCAACA
CCATTATCAT CGCAACCAAT ATCATCACAA CCATCATTAC AAACTAATAC
TCAACAACAA GGTAATCAAC CACCAAATAG AAGTGGTTTA CCAGATTTTA
TATTTTATTT CCTTCAAAAT TTACCTTCGA ATCAATCATT TATGGGACCA
TATATAGATC CTGAACAATT GATTGGAATT ATTAGAGATA CTCCTTTACC
AATACAATTT TTAAATCAAC AACAATTACA ATTACAGCAA CAACAATTAC
AGCAACAACA ATTACAATTA CAACAACAAC AACAATTACA ATTACAACAA
ATACAACAAC ATCAACAACA ACAACAACAA GCAAATAGAA CCTCACCCAC
TTTATCAAAT GAAACTTTAA TTATTCCTAA TAAACCTCAA CAACCTCAAC
AACCTCAACC TCAACAAACA CAAACTCATA AAAGAAAACA ACCAGATGAT
GAATCAAATA ATGAACAACA ACAACAACCA CCACCACAAC AACCACCACA
ACAACAACAA GAACAACAAC AGCAACCACC AACAACAACA ACAGCAACAA
CGAGTGTAGT ATCACCAATA ACAACACTAA ATTCAACGCC AATATCAGCT
CCAACTACAG TATCTCCAAT CACTACAACG ACAATCCCAT CAACAAGTTC
ACCAACTACA ACATCAACAA CTGTAACTGC TAAATCACAA CAATCAGCTT
CTGATATATA CAGAAAACGA CAGGCAAATA AACTTTCTAA AAAGTCTTAA
CTTTTTTTTT TTTTTTCTCA TTTATCAAAA AAAAAAAAAA AAAAAAAA

Translated Amino Acid Sequence Contig-U12710-1

RKFPSEIAFVNFYIEFLTNLNEENNTRVLFEKLLTWPSLEKSESIWRKFLDFEYRQNQDV
SSILKLEKRYQVTVNSNTDKSGVLQALNRYKFLNLWSCHPTEIEIITKNILDDHSDQNKD
DHHSHSHAHHHPPHSRHNANKDSTEKDQGAIDGKEGAVAAKLHKKGKGKEIKPVPQIESK
PTFSTIIPTSNWKVKKPDITQMVPFRGEIGKFTQSSVVSIPQQQQQQQQPTPISSQPISQ
QQQQQQQQPTPLSSQPISSQPSLQTNTQQQGNQPPNRSGLPDFIFYFLQNLPSNQSFMGP
YIDPEQLIGIIRDTPLPIQFLNQQQLQLQQQQLQQQQLQLQQQQQLQLQQIQQHQQQQQQ
ANRTSPTLSNETLIIPNKPQQPQQPQPQQTQTHKRKQPDDESNNEQQQQPPPQQPPQQQQ
EQQQQPPTTTTATTSVVSPITTLNSTPISAPTTVSPITTTTIPSTSSPTTTSTTVTAKSQ
QSASDIYRKRQANKLSKKS*lffffshlskkkkkkk

Homology Contig-U12710-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12710-1 (Contig-U12710-1Q) /CSM_Contig/Conti...   714  0.0
Contig-U11815-1 (Contig-U11815-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U04478-1 (Contig-U04478-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U00877-1 (Contig-U00877-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U12168-1 (Contig-U12168-1Q) /CSM_Contig/Conti...    38  0.028
Contig-U11348-1 (Contig-U11348-1Q) /CSM_Contig/Conti...    38  0.028
Contig-U09633-1 (Contig-U09633-1Q) /CSM_Contig/Conti...    38  0.028
Contig-U05244-1 (Contig-U05244-1Q) /CSM_Contig/Conti...    38  0.028
Contig-U14022-1 (Contig-U14022-1Q) /CSM_Contig/Conti...    36  0.11
Contig-U11786-1 (Contig-U11786-1Q) /CSM_Contig/Conti...    36  0.11

Homology Contig-U12710-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU061989) Dictyostelium discoideum slug cDNA, clone SLH106.      660   0.0    2
(BJ407011) Dictyostelium discoideum cDNA clone:dds37n01, 3' ...   329   0.0    4
(AU039194) Dictyostelium discoideum slug cDNA, clone SLH106.      396   e-122  2
(BJ409492) Dictyostelium discoideum cDNA clone:dds42e11, 3' ...   293   3e-98  2
(BJ379569) Dictyostelium discoideum cDNA clone:ddc35e08, 3' ...   369   2e-97  1
(BJ352506) Dictyostelium discoideum cDNA clone:dda47a06, 3' ...   299   2e-93  4
(BJ408930) Dictyostelium discoideum cDNA clone:dds47n11, 3' ...   278   2e-92  2
(BJ352023) Dictyostelium discoideum cDNA clone:dda45k10, 3' ...   262   6e-84  2
(BJ380762) Dictyostelium discoideum cDNA clone:ddc39a10, 3' ...   303   1e-77  1
(BJ353784) Dictyostelium discoideum cDNA clone:dda51l11, 3' ...   101   8e-17  1

Homology Contig-U12710-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AY347747_1(AY347747|pid:none) Drosophila subobscura suppressor o...    62   4e-08
BC045871_1(BC045871|pid:none) Danio rerio cleavage stimulation f...    61   1e-07
AY576992_1(AY576992|pid:none) Danio rerio clone RK075A2H04 cleav...    61   1e-07
BC127520_1(BC127520|pid:none) Rattus norvegicus cleavage stimula...    60   2e-07
(Q7PLX1) RecName: Full=Protein suppressor of forked;                   60   2e-07
BC063376_1(BC063376|pid:none) Xenopus tropicalis cleavage stimul...    60   2e-07
AM071387_1(AM071387|pid:none) Xenopus laevis mRNA for cleavage s...    60   2e-07
BC077522_1(BC077522|pid:none) Xenopus laevis cleavage stimulatio...    60   2e-07
A46389(A46389;S22061) gene su(f) protein, 84K splice form - frui...    60   2e-07
AJ851400_1(AJ851400|pid:none) Gallus gallus mRNA for hypothetica...    59   4e-07