Homology Contig-U12710-1 vs DNA
Query= Contig-U12710-1 (Contig-U12710-1Q) /CSM_Contig/Contig-U12710-1Q.Seq.d
(1548 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU061989) Dictyostelium discoideum slug cDNA, clone SLH106. 660 0.0 2
(BJ407011) Dictyostelium discoideum cDNA clone:dds37n01, 3' ... 329 0.0 4
(AU039194) Dictyostelium discoideum slug cDNA, clone SLH106. 396 e-122 2
(BJ409492) Dictyostelium discoideum cDNA clone:dds42e11, 3' ... 293 3e-98 2
(BJ379569) Dictyostelium discoideum cDNA clone:ddc35e08, 3' ... 369 2e-97 1
(BJ352506) Dictyostelium discoideum cDNA clone:dda47a06, 3' ... 299 2e-93 4
(BJ408930) Dictyostelium discoideum cDNA clone:dds47n11, 3' ... 278 2e-92 2
(BJ352023) Dictyostelium discoideum cDNA clone:dda45k10, 3' ... 262 6e-84 2
(BJ380762) Dictyostelium discoideum cDNA clone:ddc39a10, 3' ... 303 1e-77 1
(BJ353784) Dictyostelium discoideum cDNA clone:dda51l11, 3' ... 101 8e-17 1
(BJ380480) Dictyostelium discoideum cDNA clone:ddc38f08, 3' ... 72 9e-09 2
(AP005434) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 52 0.069 1
(AP002778) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 52 0.069 1
(AP000617) Homo sapiens genomic DNA, chromosome 11q clone:CM... 52 0.069 1
(AC021962) Homo sapiens chromosome 11 clone RP11-388M23 map ... 52 0.069 1
(AM429601) Vitis vinifera, whole genome shotgun sequence, co... 38 0.16 4
(FH520440) CHO_OF4407xc20f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 0.20 2
(EK161844) 1095458034268 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.32 3
(AC235837) Glycine max strain Williams 82 clone GM_WBb0046A1... 42 0.35 4
(AM426608) Vitis vinifera contig VV78X010792.19, whole genom... 48 1.1 1
(AC158861) Bos taurus clone CH240-97D11, WORKING DRAFT SEQUE... 48 1.1 1
(AC220356) Bos taurus clone CH240-360G14, WORKING DRAFT SEQU... 48 1.1 1
(AC164484) Bos taurus clone CH240-151H3, *** SEQUENCING IN P... 48 1.1 1
(DN848139) KECB34-049.g-T7 NVH bovine early embryo cDNA libr... 48 1.1 1
(AF045453) Dictyostelium discoideum protein kinase YakA (yak... 46 1.8 2
(AC010022) Drosophila melanogaster 3L BAC RP98-1E12 (Roswell... 42 2.2 5
(AC091218) Drosophila melanogaster 3L BAC RP98-3E24 (Roswell... 42 2.5 7
(EK277801) 1095462283702 Global-Ocean-Sampling_GS-31-01-01-1... 36 2.8 2
(FE268552) CAZO6816.rev CAZO Naegleria gruberi Flagellate St... 34 2.9 2
(FE268553) CAZO6816.fwd CAZO Naegleria gruberi Flagellate St... 34 2.9 2
(AC149802) Medicago truncatula chromosome 2 clone mth2-53d3,... 42 3.3 4
(AC198680) Rhesus Macaque BAC CH250-125J6 () complete seque... 46 4.2 1
(AC180931) Strongylocentrotus purpuratus clone R3-3061I14, W... 46 4.2 1
(EL680140) CBST9946.fwd NICHD_XGC_tropThy1 Xenopus (Silurana... 46 4.2 1
(EL680139) CBST9946.rev NICHD_XGC_tropThy1 Xenopus (Silurana... 46 4.2 1
(DW051636) CLLX4396.b1_H19.ab1 CLL(XYZ) lettuce saligna Lact... 46 4.2 1
(DT406776) JGI_CABI8100.fwd NIH_XGC_tropOvi1 Xenopus (Silura... 46 4.2 1
(DR880137) JGI_CABJ1112.rev NIH_XGC_tropSki1 Xenopus (Silura... 46 4.2 1
(DR872371) JGI_CABG12211.rev NIH_XGC_tropSto1 Xenopus (Silur... 46 4.2 1
(DR852914) JGI_CABG895.fwd NIH_XGC_tropSto1 Xenopus (Siluran... 46 4.2 1
(DR852913) JGI_CABG895.rev NIH_XGC_tropSto1 Xenopus (Siluran... 46 4.2 1
(DN027720) JGI_CAAR6419.rev NIH_XGC_tropLiv1 Xenopus (Silura... 46 4.2 1
(DN012593) JGI_CAAQ10392.rev NIH_XGC_tropHrt1 Xenopus (Silur... 46 4.2 1
(CX892505) JGI_CAAM4769.rev NIH_XGC_tropTe3 Xenopus (Siluran... 46 4.2 1
(CX887603) JGI_CAAM1609.rev NIH_XGC_tropTe3 Xenopus (Siluran... 46 4.2 1
(EW997765) HA_MX1_27b12_SP6 Lobster Multiple Tissues, Normal... 46 4.2 1
(AC215697) Homo sapiens FOSMID clone ABC13-48715900H22 from ... 40 5.1 3
(AC207721) Pongo abelii BAC clone CH276-507G20 from chromoso... 42 5.2 6
(AC174020) Bos taurus clone CH240-273M22, WORKING DRAFT SEQU... 32 7.8 2
>(AU061989) Dictyostelium discoideum slug cDNA, clone SLH106.
Length = 581
Score = 660 bits (333), Expect(2) = 0.0
Identities = 333/333 (100%)
Strand = Plus / Plus
Query: 1 aggaaattcccatcggaaattgcttttgtcaatttctacattgaatttctaaccaatcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaaattcccatcggaaattgcttttgtcaatttctacattgaatttctaaccaatcta 60
Query: 61 aatgaagaaaacaatacaagagtactctttgagaagctattaacttggccatcattggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgaagaaaacaatacaagagtactctttgagaagctattaacttggccatcattggag 120
Query: 121 aaatcggaatcaatttggagaaaattcttagattttgaatatcgtcaaaatcaagatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatcggaatcaatttggagaaaattcttagattttgaatatcgtcaaaatcaagatgtt 180
Query: 181 tcatcaattctaaagttagagaaacgttatcaagtgactgtaaattcaaataccgataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcatcaattctaaagttagagaaacgttatcaagtgactgtaaattcaaataccgataaa 240
Query: 241 tctggtgtacttcaagcattgaatagatataaatttttaaatctttggagttgtcatcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctggtgtacttcaagcattgaatagatataaatttttaaatctttggagttgtcatcca 300
Query: 301 actgaaattgaaatcattacaaagaatatcttg 333
|||||||||||||||||||||||||||||||||
Sbjct: 301 actgaaattgaaatcattacaaagaatatcttg 333
Score = 337 bits (170), Expect(2) = 0.0
Identities = 170/170 (100%)
Strand = Plus / Plus
Query: 412 aatgcaaataaagattcaactgaaaaagaccaaggagctattgatggtaaagaaggagca 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aatgcaaataaagattcaactgaaaaagaccaaggagctattgatggtaaagaaggagca 471
Query: 472 gtagctgctaaacttcataaaaaaggtaaaggtaaagaaattaaaccagtaccacaaatt 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gtagctgctaaacttcataaaaaaggtaaaggtaaagaaattaaaccagtaccacaaatt 531
Query: 532 gaatcaaaaccaactttttcaacaattatacctacttcaaattggaaagt 581
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gaatcaaaaccaactttttcaacaattatacctacttcaaattggaaagt 581
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,297,105,858
Number of extensions: 78812139
Number of successful extensions: 6481753
Number of sequences better than 10.0: 51
Length of query: 1548
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1524
Effective length of database: 104,103,628,548
Effective search space: 158653929907152
Effective search space used: 158653929907152
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home