Dictyostelium discoideum cDNA Contig-U12645-1

Assembled

Chromosomal Location of Contig-U12645-1

Sequence Contig-U12645-1

AATGCAAAAA TGAATTATAA TTTCAAAAAA AAGATTTAAA AGATTGGTCA
ATTGAAGACA CAAAAGAATG GATCAATGAA TTTAAAAAAA GAGGACCAAA
TTTAGAGAAT GTGGATTTTT CAAGATTTGA ATGGGATGGT GAACAATTAT
CATTATTTTC AATGTCAGAT TTTCAAAGAA TGTCACCTTA TGGAGTTGCA
CTATACAGAA ATTTATATTC ACAACCTAAA ATATTTCAAA CAACAACTAC
AATTGAAACT AAACCAGAGA CAGCAGAAAC TAATACTGCT ACTACTGTAG
AACCAACACC AACAACTACT ACAACAACAA CTACTACTAC TACAACCACT
ACAACAGAAG CACAACCAAC AACACCAACA TCAACAACAG GAAATGTTAA
AAAAGGACCA ATTAAAACAA TTTCCCAATG CCTAGTACAG TTATGGAAGC
TTTAGAATAT ACATCTAATA AACATCCAAA TTTAATGGCA ATGAGAGTTA
AACGTGATAA CGTTTGGAAG GGTTGGACAT GGCAACAATA TAGAAATGAA
GTATTGATGG CAGGTAAATC AATTCTTTCA TTAGGTGTTC ATTCAAGAAG
TGGTGTTAAT ATTATTGGTT TCAATTCACC AGAATGGCAT ATTGCATATT
TAGGTGCAAT TCATTGTAAT GCTTTACCAA CTGGTGTCTA TACAACTTCA
TCACCAAGTC AATGTGAATA TTTTGCAACT CATTCCGATG CTCAAATTGT
ATTTTGTGAA GATGTCACCC AATTAAATAA ATATATTAGT ATTAGAGATA
AATTACCAAA CATTAAAGCT TGTATTATTA TGGATCCA

Translated Amino Acid Sequence Contig-U12645-1

cknel*FQKKDLKDWSIEDTKEWINEFKKRGPNLENVDFSRFEWDGEQLSLFSMSDFQRM
SPYGVALYRNLYSQPKIFQTTTTIETKPETAETNTATTVEPTPTTTTTTTTTTTTTTTEA
QPTTPTSTTGNVKKGPIKTISQCLVQLWKL*nihliniqi*wq*elnvitfgrvghgnni
emky*wqvnqffh*vfiqevvlillvsihqngilhi*vqfivmlyqlvsiqlhhqvnvni
lqlipmlklyfvkmspn*inilvleinyqtlklvllwi

Homology Contig-U12645-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12645-1 (Contig-U12645-1Q) /CSM_Contig/Conti...   920  0.0
Contig-U12315-1 (Contig-U12315-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U14443-1 (Contig-U14443-1Q) /CSM_Contig/Conti...    36  0.059
Contig-U13104-1 (Contig-U13104-1Q) /CSM_Contig/Conti...    36  0.059
Contig-U12528-1 (Contig-U12528-1Q) /CSM_Contig/Conti...    36  0.059
Contig-U11132-1 (Contig-U11132-1Q) /CSM_Contig/Conti...    36  0.059
Contig-U10411-1 (Contig-U10411-1Q) /CSM_Contig/Conti...    36  0.059
Contig-U09463-1 (Contig-U09463-1Q) /CSM_Contig/Conti...    36  0.059
Contig-U05543-1 (Contig-U05543-1Q) /CSM_Contig/Conti...    36  0.059
Contig-U04694-1 (Contig-U04694-1Q) /CSM_Contig/Conti...    36  0.059

Homology Contig-U12645-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ331054) Dictyostelium discoideum cDNA clone:dda33p15, 5' ...   821   0.0    3
(BJ369594) Dictyostelium discoideum cDNA clone:ddc51i06, 5' ...   819   0.0    3
(BJ365428) Dictyostelium discoideum cDNA clone:ddc35h10, 5' ...   815   0.0    3
(BJ333563) Dictyostelium discoideum cDNA clone:dda43n02, 5' ...   371   0.0    5
(BJ363344) Dictyostelium discoideum cDNA clone:ddc26m02, 5' ...   301   e-110  3
(BJ326764) Dictyostelium discoideum cDNA clone:dda17m23, 5' ...   301   e-110  3
(BJ361627) Dictyostelium discoideum cDNA clone:ddc18e02, 5' ...   301   e-110  3
(BJ386682) Dictyostelium discoideum cDNA clone:dds10g04, 5' ...   301   e-110  3
(BJ389797) Dictyostelium discoideum cDNA clone:dds20i03, 5' ...   301   e-110  3
(BJ387782) Dictyostelium discoideum cDNA clone:dds4p20, 5' e...   301   e-110  3

Homology Contig-U12645-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


BC166192_1(BC166192|pid:none) Xenopus tropicalis hypothetical pr...   103   7e-21
(Q7ZYC4) RecName: Full=Long-chain-fatty-acid--CoA ligase ACSBG2;...   103   9e-21
AJ720017_1(AJ720017|pid:none) Gallus gallus mRNA for hypothetica...    97   5e-19
BC166305_1(BC166305|pid:none) Xenopus tropicalis hypothetical pr...    95   2e-18
AB014531_1(AB014531|pid:none) Homo sapiens mRNA for KIAA0631 pro...    95   2e-18
AK314508_1(AK314508|pid:none) Homo sapiens cDNA, FLJ95326, highl...    95   2e-18
CP001322_66(CP001322|pid:none) Desulfatibacillum alkenivorans AK...    94   4e-18
JC7557(JC7557)lipidosin - mouse                                        92   2e-17
(Q99PU5) RecName: Full=Long-chain-fatty-acid--CoA ligase ACSBG1;...    92   2e-17
AM746676_8711(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...    92   3e-17