Homology Contig-U12606-1 vs Protein

Query= Contig-U12606-1 (Contig-U12606-1Q) /CSM_Contig/Contig-U12606-1Q.Seq.d
         (833 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF074945_1(AF074945|pid:none) Mycoplasma arthritidis bacteriopha...    40   0.12
AE014188_393(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    37   0.61
AE017261_1169(AE017261|pid:none) Picrophilus torridus DSM 9790, ...    37   0.80
AL844504_221(AL844504|pid:none) Plasmodium falciparum 3D7 chromo...    35   2.3
AL844509_259(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    35   2.3
AL929353_66(AL929353|pid:none) Plasmodium falciparum strain 3D7,...    35   2.3
CP001581_3070(CP001581|pid:none) Clostridium botulinum A2 str. K...    35   2.3
CP000770_88(CP000770|pid:none) Candidatus Sulcia muelleri GWSS, ...    35   3.0
AL138652_3(AL138652|pid:none) Arabidopsis thaliana DNA chromosom...    35   3.0
(Q8M355) RecName: Full=Ribosomal protein VAR1, mitochondrial;  &...    35   3.9
AM910993_127(AM910993|pid:none) Plasmodium knowlesi strain H chr...    34   5.2
CR931677_15(CR931677|pid:none) Streptococcus pneumoniae strain 7...    34   5.2
AE014188_223(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    34   5.2
AK118613_1(AK118613|pid:none) Arabidopsis thaliana At3g54790 mRN...    34   6.7
AY813380_1(AY813380|pid:none) Schistosoma japonicum SJCHGC06303 ...    34   6.7
(Q8GWV5) RecName: Full=U-box domain-containing protein 3;       ...    34   6.7
AL844508_260(AL844508|pid:none) Plasmodium falciparum 3D7 chromo...    33   8.8
CP001146_1651(CP001146|pid:none) Dictyoglomus thermophilum H-6-1...    33   8.8

>AF074945_1(AF074945|pid:none) Mycoplasma arthritidis bacteriophage
           MAV1, complete genome.  &CP001047_538(CP001047|pid:none)
          Length = 276

 Score = 39.7 bits (91), Expect = 0.12
 Identities = 42/121 (34%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
 Frame = +2

Query: 17  LENSIGKFLNTLIKENQEFISRVNHLQLSGILNITVKTGYIRTKFIFNRKDITKTSKTKC 196
           LE SI + LN ++K N   + ++ +L L   L I         K      D+ KT K K
Sbjct: 80  LEMSIKEVLNRILKINS--VLKIENLDLEERLLIVDDVEQNNDKIHSLILDLNKTKKVKA 137

Query: 197 -FYDHL------NSTLYIGIEKGITISKAFKYLFNSTGLNVNPSMVSNLKREF----VND 343
            F DHL      +ST  I  EK   I++  K L     LNVN   +S L REF    VN+
Sbjct: 138 IFIDHLQLLDMSDSTNLIRYEKITRITRELKKLARK--LNVNVFAISQLSREFEKRQVNN 195

Query: 344 E 346
           E
Sbjct: 196 E 196

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,138,107,919
Number of extensions: 20524595
Number of successful extensions: 49403
Number of sequences better than 10.0: 18
Number of HSP's gapped: 49380
Number of HSP's successfully gapped: 18
Length of query: 277
Length of database: 1,051,180,864
Length adjustment: 127
Effective length of query: 150
Effective length of database: 640,137,871
Effective search space: 96020680650
Effective search space used: 96020680650
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)