Dictyostelium discoideum cDNA Contig-U12606-1

Assembled

Chromosomal Location of Contig-U12606-1

NO HIT FOUND.

Sequence Contig-U12606-1

CCTTGAAAAT GAAGATTTGG AGAATTCAAT TGGAAAGTTT TTAAATACCC
TTATCAAAGA AAATCAAGAA TTTATTTCAA GAGTAAATCA TCTTCAGTTA
AGCGGAATCT TGAATATTAC AGTTAAAACA GGATATATTA GAACTAAATT
CATTTTTAAT CGAAAAGATA TCACTAAAAC CTCAAAAACC AAATGCTTTT
ATGATCATTT AAATTCAACT CTTTATATAG GCATAGAAAA AGGTATTACC
ATAAGTAAAG CATTCAAATA CCTATTTAAC TCCACTGGTT TGAATGTAAA
CCCCTCAATG GTATCAAATC TAAAAAGAGA GTTTGTTAAT GATGAACCAA
CTGATGATAA TTTATTCTTG ACTCTAAACG TTGTTAATTT TGTTGATGTT
AACCAAACAA AAATCCAAAA AAATCAATGT AGACACTACA ACACCATTGC
ATTAAGAAAT TTTCAACTTG CTGATACTTT ACTCAACAAT CAATCATTTA
TAAGAGAAGC CTCATACCAT TACTATGTTT CAACAGAAAT GTCAATGAGA
AGTCTTTTGG TTTTTAATTA TAATGATATC CCCTATGCTT TTTCAATTAC
TCGTTTAAGA GGTTTATTAT CTAGAATAAG TATTACAACT GAAACCATAC
CACAGATTCC AGATCTTTAC AATAATTACA GACACACTCA TTTAAAAAAT
GAAGAAATCA ATCGTAGGGA ACTATTAAGA TTTCGTTCAA TTTCAAATCA
ATTATTAAAC ATCTCTAATC TCTCTAATCA AAAACTAAAN AAAATATATA
AATAATAATA AAAATAATAA TTTATTTTTA AAT

Translated Amino Acid Sequence Contig-U12606-1

LENEDLENSIGKFLNTLIKENQEFISRVNHLQLSGILNITVKTGYIRTKFIFNRKDITKT
SKTKCFYDHLNSTLYIGIEKGITISKAFKYLFNSTGLNVNPSMVSNLKREFVNDEPTDDN
LFLTLNVVNFVDVNQTKIQKNQCRHYNTIALRNFQLADTLLNNQSFIREASYHYYVSTEM
SMRSLLVFNYNDIPYAFSITRLRGLLSRISITTETIPQIPDLYNNYRHTHLKNEEINRRE
LLRFRSISNQLLNISNLSNQKLXKIYK***k**fifk

Homology Contig-U12606-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12606-1 (Contig-U12606-1Q) /CSM_Contig/Conti...  1493  0.0
Contig-U10902-1 (Contig-U10902-1Q) /CSM_Contig/Conti...   331  7e-91
Contig-U09585-1 (Contig-U09585-1Q) /CSM_Contig/Conti...    38  0.015
Contig-U13915-1 (Contig-U13915-1Q) /CSM_Contig/Conti...    36  0.059
Contig-U13391-1 (Contig-U13391-1Q) /CSM_Contig/Conti...    36  0.059
Contig-U09281-1 (Contig-U09281-1Q) /CSM_Contig/Conti...    36  0.059
Contig-U14306-1 (Contig-U14306-1Q) /CSM_Contig/Conti...    34  0.23
Contig-U13737-1 (Contig-U13737-1Q) /CSM_Contig/Conti...    34  0.23
Contig-U10621-1 (Contig-U10621-1Q) /CSM_Contig/Conti...    34  0.23

Homology Contig-U12606-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ355424) Dictyostelium discoideum cDNA clone:dda57d05, 3' ...   785   0.0    2
(BJ354291) Dictyostelium discoideum cDNA clone:dda53l02, 3' ...   761   0.0    2
(BJ438087) Dictyostelium discoideum cDNA clone:ddv36g08, 3' ...   726   0.0    3
(BJ407240) Dictyostelium discoideum cDNA clone:dds37m23, 3' ...   726   0.0    2
(BJ355148) Dictyostelium discoideum cDNA clone:dda55k24, 3' ...   722   0.0    2
(BJ352641) Dictyostelium discoideum cDNA clone:dda47m09, 3' ...   708   0.0    2
(BJ345059) Dictyostelium discoideum cDNA clone:dda21o12, 3' ...   700   0.0    2
(BJ355387) Dictyostelium discoideum cDNA clone:dda56l14, 3' ...   658   0.0    2
(BJ353514) Dictyostelium discoideum cDNA clone:dda50p11, 3' ...   658   0.0    2
(BJ347194) Dictyostelium discoideum cDNA clone:dda26k08, 3' ...   658   0.0    2

Homology Contig-U12606-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF074945_1(AF074945|pid:none) Mycoplasma arthritidis bacteriopha...    40   0.12
AE014188_393(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    37   0.61
AE017261_1169(AE017261|pid:none) Picrophilus torridus DSM 9790, ...    37   0.80
AL844504_221(AL844504|pid:none) Plasmodium falciparum 3D7 chromo...    35   2.3
AL844509_259(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    35   2.3
AL929353_66(AL929353|pid:none) Plasmodium falciparum strain 3D7,...    35   2.3
CP001581_3070(CP001581|pid:none) Clostridium botulinum A2 str. K...    35   2.3
CP000770_88(CP000770|pid:none) Candidatus Sulcia muelleri GWSS, ...    35   3.0
AL138652_3(AL138652|pid:none) Arabidopsis thaliana DNA chromosom...    35   3.0
(Q8M355) RecName: Full=Ribosomal protein VAR1, mitochondrial;  &...    35   3.9