Dictyostelium discoideum cDNA Contig-U12580-1

Assembled

Chromosomal Location of Contig-U12580-1

Sequence Contig-U12580-1

GGTTATTAAT TTAATTTTAA GAACTATTGT ATTCCATTGC TATTTATTTA
TATTAAATTT GTACATTACT CCTTATTATT ATATATAACA CAAAAAAAAA
ATGAAAAATA AAAAAAAAAA GG-------- --GGAATAGT TTAACCCTTT
AAATCAACCT TTGAGATGTA TCTAACATGT TTAGATGTGC CTTGTGATTT
TTAGGAAGAA AAAGTTGCGC TGGTATCTAC GCTATCTGAA TAAATCCTGA
CGATATCGTT CGTCCATGTT GCTACAACTA ATAACTAATA ATATATTAAT
AATGTCAGTA CATCCAAGAA ACCAAGGTAA AGATGATTGT TGTGAAAAAA
CACATCTTGA TAGTCAATAC TCTCCAGGTT ATTACTGGTT AGGTAATAAT
ACATTAAAAG TACCATTAGT TTTACATAAA GAAAATAGAC AAAGATTAGT
TTCTCAAATT TTATCAAAAC ATAAAGATCA AGTTAAAGAA AATTCATTTA
TTTTATTAGA AAGTGGTAAA TCAACAATGC AATATGATAC AGATCATGAA
CCATTATTTA AACAAGAAAG ATACTTTTTT TGGACATTTG GTTCAGATAT
TCCAGATTGT TTTGGTATTG TTGGATTGGA TGAACAAGCA ACTAGTATTT
TATGTATTCC AAAATTGCCA GCTGAATATG CAACATGGAT GGGAGAAATT
CGTTCAAAAG AATACTATAA ATCGATCTTT TTAGTCGACC AAGTATTATA
TGTCGATGAG ATGATGGATT ACTTAAAGAG TAAGAACGCA TCCACAATCT
ACACCATCTT GGGTACCAAC ACCGATAGTG GCTCAACATT TGTAGAACCA
CAATATCCAG GTTTAAGAGA GACTTTCAAT GTAAACAATA CTTTATTATT
CCCAGAGATT GCCGAATGTC GTGTAATTAA ATCACCAAAG GAGGTTGAGG
TAATTCGTTA TTGTGTCGAT GCTTCCGTTT CTGCACATAA ACATGTCATG
CGTAAAGTCA AGGTTGGCTT AAAGGAGTAC CAATGTGAAA GTGAGTTCCT
TCATCATGTT TACAATGAAT GGGGTTGTAA AAATGTTGGT TATACTTGTA
TTTGTGCCGC CAATAAGAAC TCTGCCGTCC TCCATTATGG TCATGCAGGT
GAACCAAACT CTGCCACCAT CAGTGAGAAT GGTTTCTGTT TATTCGATAT
GGGTGCTGAA TATCATAGCT ATACCGCCGA TATCACCTGT TCTTTCCCTG
CCACCGGTAA ATTCAGTCCA GAACAAAGAG TTGTCTATCA AGCCGTATTG
GATGCTTCAG TAGCCGTTAT GGAAGCAATG AGACCAGGCG TTTCTTGGGT
AGATATGCAT AAATTGGCTG AACGTTGTAT TTTAGCTGCC TTATTGAAAG
CTGGAATTTT GGTTGGTGAC CTTCAAGATC TAATTGCCAA TAAAATTGGT
TCAGTTTTCT TCCCACATGG TTTAGGTCAC TTCCTTGGTT TGGATACACA
TGATGTAGGT GGTTATTTAG GTGATTGTCA ACCAAAAGTT CATTCACTCA
GAACTACTCG TACCCTCAAA GCTGGTATGG TCATCACTTC TGAACCTGGT
TGCTATTTCA TCAATCATTT ACTCACTCAA GCTTTATCAA ATCCTGAAAC
TGCCAAATTC TTTAATCTCA CCGAATTAGA TAAATATCGT AACATTGGTG
GTGTACGTAT TGAAGATGAT ATTTTAGTCA CTGAAACTGG TTGTGATAAT
CTTTCAAAAA ATTTACCAAG AACTATTGAT GAAATTGAAG CTTTTATGTT
AAAATAAATT TTTAAAAAAA AAATAAAAAC TATTAATAAA AACTATTAAT
AAAAACTATT AAAAAAATAA ATAAATAAAT TCTATTTTTT TAAAAAAAAA
AG

Translated Amino Acid Sequence Contig-U12580-1

vinlilrtivfhcylfilnlyitpyyyi*HKKKMKNKKKK---

---NSLTL*inl*dvsnmfrcal*flgrkscagiyai*inpddivrpccyn**liiy**c
qyiqetkvkmivvkkhilivntlqvitg*viih*kyh*fyikkidkd*flkfyqnikikl
kkihlfy*kvvnqqcnmiqimnhylnkkdtffghlvqifqivlvlldwmnkqlvfyvfqn
cqlnmqhgwekfvqkntinrsf*stkyymsmr*wit*rvrthpqstpswvptpivaqhl*
nhniqv*erlsm*tilyysqrlpnvv*lnhqrrlr*fvivsmlpflhinmscvksrla*r
stnvkvssfimftmngvvkmlvilvfvppirtlpssimvmqvnqtlppsvrmvsvysiwv
lniiaippispvlslppvnsvqnkelsikpywmlq*plwkq*dqaflg*icinwlnvvf*
lpy*klefwlvtfki*lpiklvqfsshmv*vtslvwihmm*vvi*vivnqkfihsellvp
sklvwssllnlvaissiiyslklyqilklpnslispn*inivtlvvyvlkmif*slklvv
iifqkiyqellmklkllc*nkflkkk*klliktinkny*knk*insiflkkk

Homology Contig-U12580-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12580-1 (Contig-U12580-1Q) /CSM_Contig/Conti...  3261  0.0
Contig-U13420-1 (Contig-U13420-1Q) /CSM_Contig/Conti...    38  0.034
Contig-U11983-1 (Contig-U11983-1Q) /CSM_Contig/Conti...    38  0.034
Contig-U12484-1 (Contig-U12484-1Q) /CSM_Contig/Conti...    36  0.14
Contig-U11269-1 (Contig-U11269-1Q) /CSM_Contig/Conti...    36  0.14
Contig-U10587-1 (Contig-U10587-1Q) /CSM_Contig/Conti...    36  0.14
Contig-U10164-1 (Contig-U10164-1Q) /CSM_Contig/Conti...    36  0.14
Contig-U10157-1 (Contig-U10157-1Q) /CSM_Contig/Conti...    36  0.14
Contig-U05307-1 (Contig-U05307-1Q) /CSM_Contig/Conti...    36  0.14
Contig-U04529-1 (Contig-U04529-1Q) /CSM_Contig/Conti...    36  0.14

Homology Contig-U12580-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ375271) Dictyostelium discoideum cDNA clone:ddc18h05, 3' ...  1336   0.0    1
(BJ399764) Dictyostelium discoideum cDNA clone:dds7k12, 3' e...  1314   0.0    1
(BJ343594) Dictyostelium discoideum cDNA clone:dda16g13, 3' ...  1255   0.0    3
(BJ346179) Dictyostelium discoideum cDNA clone:dda30i02, 3' ...  1247   0.0    2
(BJ398387) Dictyostelium discoideum cDNA clone:dds12b12, 3' ...  1203   0.0    1
(AU039687) Dictyostelium discoideum slug cDNA, clone SLG184.     1201   0.0    1
(BJ399697) Dictyostelium discoideum cDNA clone:dds7g01, 3' e...  1178   0.0    2
(BJ432940) Dictyostelium discoideum cDNA clone:ddv20e11, 3' ...  1160   0.0    1
(BJ340836) Dictyostelium discoideum cDNA clone:dda4g04, 3' e...  1158   0.0    1
(BJ346681) Dictyostelium discoideum cDNA clone:dda24m17, 3' ...  1150   0.0    1

Homology Contig-U12580-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q55E60) RecName: Full=Xaa-Pro dipeptidase;          Short=X-Pro...  1030   0.0
EU477530_1(EU477530|pid:none) Gallus gallus peptidase D (PEPD) m...   495   e-138
AJ720071_1(AJ720071|pid:none) Gallus gallus mRNA for hypothetica...   495   e-138
DQ000560_1(DQ000560|pid:none) Synthetic construct clone PSF:1092...   486   e-136
BC028295_1(BC028295|pid:none) Homo sapiens peptidase D, mRNA (cD...   486   e-136
(P12955) RecName: Full=Xaa-Pro dipeptidase;          Short=X-Pro...   484   e-135
AY892159_1(AY892159|pid:none) Synthetic construct Homo sapiens c...   484   e-135
AK290756_1(AK290756|pid:none) Homo sapiens cDNA FLJ75447 complet...   483   e-134
(Q5RFB3) RecName: Full=Xaa-Pro dipeptidase;          Short=X-Pro...   480   e-134
(Q5I0D7) RecName: Full=Xaa-Pro dipeptidase;          Short=X-Pro...   474   e-132