Dictyostelium discoideum cDNA Contig-U12528-1

Assembled

Chromosomal Location of Contig-U12528-1

Sequence Contig-U12528-1

ATAAAGATGC TGTATATATT AATATTCCAG AAAGTAAATT AAATTTTTCA
AAAGCTAAAG AAGAAGGAGA GGGTGAAGGT GAAAGTATGG TTAAAGATCT
TCAAAATACA CAATTTTCAA TTGATGAAAA GATGGAACAT TCAGAATTAT
CATTATTTTC AAATAGACCA CCAATTAAAT TTACAAATAA TACTTATACA
CAAATTGAAG AAATTGATGA TAAAGATTAT TATGATTCCG ATGGTGAAAA
AGATGAAGAA GAACAAGAAG AACAAGAAGA AAAAGGTACT AAAAAAGTTG
AAGTAGTCGA AGAAAAAGAT GGTAGAGTTA GAAGAAAGGT TAAATTTATT
GATATGAAGA AGAACCCTGC TATTAATAGT GATGATGAAG AGGAGGATGA
TGATGAAGAT GGTGACGAGG AAGATGAAGA AGAAGATGAT GATGATGATG
ATGAAAATGT CAATTCTAGT AAAGTTGAAT TTGATGATGA TGATGATTTA
GAAGGAAGGA TGAAGAATTA AGTGATGAAG AATATTATGA TCCAGAAAAT
AAAAATAAAT TAAATTTAGA AGATGAAGAA GATGATGATG AAGACGAAGA
TGAAGAAGAT GACGATGAGG ACGAAGATGA AGATGAGGAT GATGAAGATG
AAGAAGAAGA ATATGATGAA GAAACTGGTG AAAGTGCTAA ATGGAAAGAA
AAGATGAAAC CAACAATTCA AATTACAGGT ACAAATCATT TAAATTTATC
AAGATTAATT TATGGAGATG AACCATCAAA GAAATCAAAT AAAAAAGATG
AAAATGAAGA AGATGAAGAT TTCTTTAAAG TTAAAAAAGG TGGTTATGGA
TCAATGAAAT TAAGTACTGA TAAAGAAGAA TCAACAAAAG ATTTATTAGA
TTCATCAAAA TATATTCATT CAATAAATGA TTTTAAATCT GAAGATATTA
AAGAATTGTT AGCAATTAAA TTTGTAAATA GAAATGAATT GGAAACTACA
GGTTTAATTG GTAAGAATAA TGCTGAAGGT GAAGATGAAG TTTTATTTGG
TGATTTTGAA GATTTAGAAA CTGGTAAAAA ATATGATTCA TCATCATCAA
CAACAACAAA AAATAATAAA GAAAATGATA AAGGTGAAGA AGATGATGAT
GATGATGATG ATAATTCTCA ATCAGATGAT AAAAATAATA AAGAAAATTC
AATTGAAAAT GAAAGAG--- -------GGA TTTGGATTCA TNCTATTAAT
GTAGTAAAGA AATTGAAGTT GATTGGTCAN CCCGATAAAA TTATGAAGAA
AACTTGTTTT GTCAATGGTA TGTTTACAAG TCGTTTGGAG GTGGCTAAAT
TCGTTGGTGC TACAATTCGT ACAGTCTCTG GTATTAGAGG TCAAATTAAG
AAACCATTGT CTCATCCAGA GGGTTCTTTC CGTGCAACTT TTGAAGATAG
ATTATTACCA TCCGATATCA TTTTCTTACG TACTTGGTAT ACCATCACAC
CAACTCGTTT CTATAATCCT GTAACCTCAT TATTACAAGA GAAGAAGACT
CATTGGGAAG GTATGAAAAC TGTTGGTCAA TTACGTTTTG AGAATAACCT
TTCTGCACCT GTCAAAAAAG ATAGTTCCTA TCAAGGTAAG ATCGAAAGAG
ATGAAAAGAA ATTCAAAGAA CTTCGTATTC CAAATAAACT TCAATCTCAA
TTGCCATTCG ATTTGAAACC AAAAGGTACT AAAATCATTA AAAACGCCGA
TGATGCTTTA CTATCTTCTC GTGTTAACAT CATTGAACCC CACGAGAAAC
AAGTCGCAGA TTTAATGAGA CGTTTGGAAA GTATTAAAAA TAAAAAGATT
GAAAAAGAAC AACAACGTAA ACAACAATAT CAAGATGAAA AACTTAAAAA
ACAATCTAAA ATTGATGTTC TCAAAGAAAA AAAACAAAAA GAAACAAAGA
AAAGAAAATC AAAATTAGAA GCATTAGGTA AAANNAAAAA GAAAA

Translated Amino Acid Sequence Contig-U12528-1

*rcciy*ysrk*ikffks*rrrrg*r*kyg*rsskytifn**kdgtfriiiifk*ttn*i
yk*ylytn*rn***rll*frw*kr*rrtrrtrrkry*ks*ssrrkrw*s*kkg*iy*yee
epcy*****rgg***rw*rgr*rrr******kcqf**s*i*****FRRKDEELSDEEYYD
PENKNKLNLEDEEDDDEDEDEEDDDEDEDEDEDDEDEEEEYDEETGESAKWKEKMKPTIQ
ITGTNHLNLSRLIYGDEPSKKSNKKDENEEDEDFFKVKKGGYGSMKLSTDKEESTKDLLD
SSKYIHSINDFKSEDIKELLAIKFVNRNELETTGLIGKNNAEGEDEVLFGDFEDLETGKK
YDSSSSTTTKNNKENDKGEEDDDDDDDNSQSDDKNNKENSIENER---

---IWIHXINVVKKLKLIGXPDKIMKKTCFVNGMFTSRLEVAKFVGATIRTVSGIRGQIK
KPLSHPEGSFRATFEDRLLPSDIIFLRTWYTITPTRFYNPVTSLLQEKKTHWEGMKTVGQ
LRFENNLSAPVKKDSSYQGKIERDEKKFKELRIPNKLQSQLPFDLKPKGTKIIKNADDAL
LSSRVNIIEPHEKQVADLMRRLESIKNKKIEKEQQRKQQYQDEKLKKQSKIDVLKEKKQK
ETKKRKSKLEALGKXKKK

Homology Contig-U12528-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12528-1 (Contig-U12528-1Q) /CSM_Contig/Conti...  1368  0.0
Contig-U11105-1 (Contig-U11105-1Q) /CSM_Contig/Conti...    52  2e-06
Contig-U12300-1 (Contig-U12300-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U11450-1 (Contig-U11450-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U11433-1 (Contig-U11433-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U11430-1 (Contig-U11430-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U11332-1 (Contig-U11332-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U09137-1 (Contig-U09137-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U14153-1 (Contig-U14153-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11728-1 (Contig-U11728-1Q) /CSM_Contig/Conti...    38  0.036

Homology Contig-U12528-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ443900) Dictyostelium discoideum cDNA clone:ddv54d15, 3' ...  1168   0.0    1
(BJ445976) Dictyostelium discoideum cDNA clone:ddv61b07, 3' ...   894   0.0    1
(BJ445591) Dictyostelium discoideum cDNA clone:ddv60a01, 3' ...   448   e-161  3
(BJ427091) Dictyostelium discoideum cDNA clone:ddv61b07, 5' ...   466   e-158  2
(BJ425070) Dictyostelium discoideum cDNA clone:ddv54d15, 5' ...   486   e-156  3
(AR546949) Sequence 2080 from patent US 6747137.                   46   0.004  3
(DL173777) Methods for Identifying the Target of a Compound ...    46   0.004  3
(AX489337) Sequence 6637 from Patent WO02053728.                   46   0.004  3
(GR585140) CCAA2988.b1 CCAA Dictyostelium purpureum 0 hr sta...    46   0.010  2
(GR584898) CCAA2794.b1 CCAA Dictyostelium purpureum 0 hr sta...    46   0.011  2

Homology Contig-U12528-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CR382129_818(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...   198   7e-49
CR382139_78(CR382139|pid:none) Debaryomyces hansenii strain CBS7...   191   7e-47
CP000498_607(CP000498|pid:none) Pichia stipitis CBS 6054 chromos...   189   2e-46
AM920427_1197(AM920427|pid:none) Penicillium chrysogenum Wiscons...   187   1e-45
BC043345_1(BC043345|pid:none) Homo sapiens BMS1 homolog, ribosom...   186   2e-45
CU928181_283(CU928181|pid:none) Zygosaccharomyces rouxii strain ...   186   3e-45
D80009_1(D80009|pid:none) Homo sapiens KIAA0187 mRNA, partial cds.    186   3e-45
AC024843_13(AC024843|pid:none) Caenorhabditis elegans cosmid Y61...   185   5e-45
AK129082_1(AK129082|pid:none) Mus musculus mRNA for mKIAA0187 pr...   184   8e-45
AE017343_220(AE017343|pid:none) Cryptococcus neoformans var. neo...   184   8e-45