<Clone: Contig-U12505-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U12505-1

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Assembled

Chromosomal Location of Contig-U12505-1

< more Chromosomal info >

Chromosome Number 2
Length 8467578
Start Poin 1,722,541
End Point 1,721,438
Strand MINUS

Sequence Contig-U12505-1

AATTTTTTTT TAAAATACTT ATTGCTTAAA ATAATTTTTG ACAGTTTCCC
CTATTACACT TTTTATTTTT TTCCACTGTA ATACTACCTT TTTTTACATT
TATTTCTTTA AAATAAAAAA ATAAAATAAA TATAAAATAT AATAAAATAA
AATAATTAAA AAAATAAATA ATAAAAAATA AATAATAAAA AAATAAATAA
TAAAAAAATA ATAAAAAAAA TAAGTAATAA AAAAATAAAA AAATAAAATA
ATTATAAAAT ATAATAAAAT AAAATAATTT TAATAGAAAA AAATAAAAAA
AATTTTAAAA CAAAAGATAT ATAAATAATT AAAAAAATCT ATAAATAGAA
AAAAAAAA-- --------TA TTGATTCATT AGGTAAATAT GAATTCTTGA
AAATTTGTAA AATGAATAAC TCTGGTGCTT CAGTTTTATA CACGATTTTG
GCATACTTTG GAGCATTACT TTTAACAGGT GTTTTTGTAT CATGGAAAAT
TCGTATTGTT GATATTGAAG AATTCAATGA ATCACGTGCC ATCGCTCATA
CACTTTATGC TATTAGTTTT TGTCTTTTCG TTATTGTACC ATTAATGATC
TCCCCATTGG AAAAACAATC AGAAACTATT ATTCTAAGTG TTGCTGGTCT
TTTTATTACA ACTGCAGCAG TTTTAATTAT TTTCTTACCA AAATTCTATA
GAGTCTATGA ATATGGTGAA GAAGGTACAA ATGAAATGTT TAAATCTAAA
AAATCATCAA ATATTGCCAC TGCTCGTGCT GAAAGTCATA AAAGTTCAAA
TAGTGGTAAC CATAGAACTA ATCGTAGAGG TAATCTCGTA TCTGGTGATT
TCACTGATGA TTCAGAATCT TCAGTCATTG AACCAAATCA AGAAGTTGCT
GATGTTACAT CTGGTGCCGT TTTAGCTGAT TTCACTGAAG AATCAGTTTC
TGAAATTGAT GAAAATGAAA AAAACCACAA TGATGAAATT GAATTACCAG
AAATAAATCA ATCTGAACAA CAAAATTCAG AAATTGAACA ACCACCACCA
CCACCACCAC CACAACAAAT AGAACCAGAT GAAAAGAATC AAGATTAACA
AATAAAAAAA AAA

Translated Amino Acid Sequence Contig-U12505-1

<All Frames> 
iff*ntyclk*fltvspitlfiffhcnttffyiyffkikk*nkyki**nkiikkinnkk*
iikk*iikk**kk*vikk*knkiiikynkik*f**kkikkilkqkiyk*LKKSINRKKK-
--

---IDSLGKYEFLKICKMNNSGASVLYTILAYFGALLLTGVFVSWKIRIVDIEEFNESRA
IAHTLYAISFCLFVIVPLMISPLEKQSETIILSVAGLFITTAAVLIIFLPKFYRVYEYGE
EGTNEMFKSKKSSNIATARAESHKSSNSGNHRTNRRGNLVSGDFTDDSESSVIEPNQEVA
DVTSGAVLADFTEESVSEIDENEKNHNDEIELPEINQSEQQNSEIEQPPPPPPPQQIEPD
EKNQD*qikkk


Homology Contig-U12505-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U12505-1 (Contig-U12505-1Q) /CSM_Contig/Conti...  1291  0.0
Contig-U12412-1 (Contig-U12412-1Q) /CSM_Contig/Conti...    86  9e-17
Contig-U12430-1 (Contig-U12430-1Q) /CSM_Contig/Conti...    48  2e-05
Contig-U13880-1 (Contig-U13880-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U11113-1 (Contig-U11113-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U08718-1 (Contig-U08718-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U14674-1 (Contig-U14674-1Q) /CSM_Contig/Conti...    34  0.31
Contig-U14166-1 (Contig-U14166-1Q) /CSM_Contig/Conti...    34  0.31
Contig-U14068-1 (Contig-U14068-1Q) /CSM_Contig/Conti...    34  0.31
Contig-U13109-1 (Contig-U13109-1Q) /CSM_Contig/Conti...    34  0.31


Homology Contig-U12505-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ442889) Dictyostelium discoideum cDNA clone:ddv51c10, 3' ...   991   0.0    2
(AU262822) Dictyostelium discoideum vegetative cDNA clone:VS...   837   0.0    3
(BJ443418) Dictyostelium discoideum cDNA clone:ddv52i23, 3' ...   660   0.0    1
(BJ442276) Dictyostelium discoideum cDNA clone:ddv49k08, 3' ...   383   e-101  1
(BJ443992) Dictyostelium discoideum cDNA clone:ddv54i22, 3' ...    60   1e-18  4
(BJ445103) Dictyostelium discoideum cDNA clone:ddv58o09, 3' ...    60   1e-18  4
(BJ445034) Dictyostelium discoideum cDNA clone:ddv58a07, 3' ...    60   3e-18  4
(BJ446771) Dictyostelium discoideum cDNA clone:ddv63e22, 3' ...    96   4e-15  1
(BJ446469) Dictyostelium discoideum cDNA clone:ddv62g21, 3' ...    96   4e-15  1
(BJ427844) Dictyostelium discoideum cDNA clone:ddv63e22, 5' ...    96   4e-15  1


Homology Contig-U12505-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


(Q54LG8) RecName: Full=Metabotropic glutamate receptor-like prot...   302   1e-80
(Q54L53) RecName: Full=Metabotropic glutamate receptor-like prot...   274   5e-72
(Q54SH7) RecName: Full=Metabotropic glutamate receptor-like prot...   272   2e-71
(Q54QG7) RecName: Full=Metabotropic glutamate receptor-like prot...   135   3e-30
(Q54SW3) RecName: Full=Metabotropic glutamate receptor-like prot...   125   4e-27
(Q55AP1) RecName: Full=Metabotropic glutamate receptor-like prot...   124   6e-27
(Q54U89) RecName: Full=Metabotropic glutamate receptor-like prot...   100   9e-20
(Q55AP3) RecName: Full=Metabotropic glutamate receptor-like prot...    86   2e-15
BX629345_1(BX629345|pid:none) Zebrafish DNA sequence from clone ...    54   8e-06
BX469886_1(BX469886|pid:none) Zebrafish DNA sequence from clone ...    54   8e-06


<Clone: Contig-U12505-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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