Homology Contig-U12480-1 vs Protein
Query= Contig-U12480-1 (Contig-U12480-1Q) /CSM_Contig/Contig-U12480-1Q.Seq.d
(1160 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q869L3) RecName: Full=Midasin; AltName: Full=MIDAS-containing p... 407 e-112
AC116960_63(AC116960|pid:none) Dictyostelium discoideum chromoso... 406 e-112
AC150203_9(AC150203|pid:none) Medicago truncatula clone mth2-65b... 202 2e-50
CR954201_404(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 202 2e-50
AM502238_28(AM502238|pid:none) Leishmania infantum chromosome 20. 199 2e-49
CT005259_26(CT005259|pid:none) Leishmania major strain Friedlin,... 196 1e-48
(Q9NU22) RecName: Full=Midasin; AltName: Full=MIDAS-containing p... 192 2e-47
AL929603_82(AL929603|pid:none) Trypanosoma brucei chromosome 1, ... 190 9e-47
(O94248) RecName: Full=Midasin; AltName: Full=MIDAS-containing p... 183 1e-44
CP001575_174(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 179 2e-43
BX510339_1(BX510339|pid:none) Zebrafish DNA sequence from clone ... 177 5e-43
AE016820_442(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 177 6e-43
(Q12019) RecName: Full=Midasin; AltName: Full=MIDAS-containing p... 169 2e-40
FM992691_90(FM992691|pid:none) Candida dubliniensis CD36 chromos... 169 2e-40
CU633900_877(CU633900|pid:none) Podospora anserina genomic DNA c... 157 9e-37
AM270006_8(AM270006|pid:none) Aspergillus niger contig An02c0110... 155 2e-36
AP007159_382(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 154 8e-36
CR382128_314(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 150 8e-35
AE013599_1411(AE013599|pid:none) Drosophila melanogaster chromos... 139 2e-31
AE013599_1410(AE013599|pid:none) Drosophila melanogaster chromos... 139 2e-31
T33162(T33162)hypothetical protein F55F10.2 - Caenorhabditis ele... 118 3e-25
(Q8T5T1) RecName: Full=Midasin; AltName: Full=MIDAS-containing p... 112 2e-23
AC004146_4(AC004146|pid:none) Arabidopsis thaliana chromosome I ... 109 2e-22
AE014187_324(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 107 1e-21
AL590448_188(AL590448|pid:none) chromosome VIII of strain GB-M1 ... 95 5e-18
AL158813_1(AL158813|pid:none) Human DNA sequence from clone RP11... 60 1e-07
AM475015_1(AM475015|pid:none) Vitis vinifera contig VV78X040164.... 52 4e-05
AM475989_2(AM475989|pid:none) Vitis vinifera contig VV78X184240.... 42 0.042
CP000661_961(CP000661|pid:none) Rhodobacter sphaeroides ATCC 170... 40 0.21
CP001229_911(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 40 0.21
BX842653_67(BX842653|pid:none) Bdellovibrio bacteriovorus comple... 39 0.46
CP001486_607(CP001486|pid:none) Vibrio cholerae MJ-1236 chromoso... 38 0.60
AM910996_481(AM910996|pid:none) Plasmodium knowlesi strain H chr... 38 0.60
AE003853_689(AE003853|pid:none) Vibrio cholerae O1 biovar eltor ... 38 0.60
AF197466_3(AF197466|pid:none) Pseudomonas fluorescens NirP (nirP... 37 1.0
CP000698_3675(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 37 1.0
CP001056_700(CP001056|pid:none) Clostridium botulinum B str. Ekl... 37 1.3
CP001562_435(CP001562|pid:none) Bartonella grahamii as4aup, comp... 37 1.7
X93091_3(X93091|pid:none) Oenococcus oeni alsS gene for alpha-ac... 36 2.3
CP000721_585(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 36 2.3
CP000103_1248(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 36 2.3
CP000656_1756(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 36 3.0
CP000155_4198(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 36 3.0
CP001078_660(CP001078|pid:none) Clostridium botulinum E3 str. Al... 36 3.0
CP000494_1972(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 36 3.0
FN357533_5(FN357533|pid:none) Schistosoma mansoni genome sequenc... 36 3.0
CP000511_4896(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 36 3.0
CP000091_1941(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 36 3.0
(Q51481) RecName: Full=Denitrification regulatory protein nirQ; ... 35 3.9
CP001146_1446(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 35 3.9
CP001434_31(CP001434|pid:none) Borrelia valaisiana VS116 plasmid... 35 5.1
CP001157_4013(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 35 5.1
CP001434_21(CP001434|pid:none) Borrelia valaisiana VS116 plasmid... 35 5.1
CP000302_1964(CP000302|pid:none) Shewanella denitrificans OS217,... 35 5.1
CP001230_786(CP001230|pid:none) Persephonella marina EX-H1, comp... 35 6.6
AE008384_2988(AE008384|pid:none) Methanosarcina mazei strain Goe... 35 6.6
EU194339_2(EU194339|pid:none) Azospirillum brasilense strain Sp2... 35 6.6
AE016819_66(AE016819|pid:none) Ashbya gossypii (= Eremothecium g... 35 6.6
CP000384_4400(CP000384|pid:none) Mycobacterium sp. MCS, complete... 35 6.6
CP000089_3165(CP000089|pid:none) Dechloromonas aromatica RCB, co... 34 8.7
AE009948_949(AE009948|pid:none) Streptococcus agalactiae 2603V/R... 34 8.7
CP001080_1126(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP... 34 8.7
AE014188_302(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.7
CP001132_2106(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 34 8.7
AP007255_2943(AP007255|pid:none) Magnetospirillum magneticum AMB... 34 8.7
CP000964_4714(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 34 8.7
AK226731_1(AK226731|pid:none) Arabidopsis thaliana mRNA for hypo... 34 8.7
U10245_1(U10245|pid:none) Arabidopsis thaliana Col-O putative RN... 34 8.7
>(Q869L3) RecName: Full=Midasin; AltName: Full=MIDAS-containing
protein;
Length = 5900
Score = 407 bits (1046), Expect = e-112
Identities = 201/201 (100%), Positives = 201/201 (100%)
Frame = +2
Query: 2 EDELEEILCKRCALPPSYCKKLVLIMKELQLNRQGSNQVFAGKHGAITFRDLFRWAERQP 181
EDELEEILCKRCALPPSYCKKLVLIMKELQLNRQGSNQVFAGKHGAITFRDLFRWAERQP
Sbjct: 1276 EDELEEILCKRCALPPSYCKKLVLIMKELQLNRQGSNQVFAGKHGAITFRDLFRWAERQP 1335
Query: 182 SSYEELGIAGYQLLAERLRKDEEKLIIKQVIEKHLKIKLDIESIYSCDDKPEFLKLLQLL 361
SSYEELGIAGYQLLAERLRKDEEKLIIKQVIEKHLKIKLDIESIYSCDDKPEFLKLLQLL
Sbjct: 1336 SSYEELGIAGYQLLAERLRKDEEKLIIKQVIEKHLKIKLDIESIYSCDDKPEFLKLLQLL 1395
Query: 362 SENDSELSKSNHLEKIVWTRSMKRLFSLVGKCLEHKEPILLVGETGCSKTTICQLYSILN 541
SENDSELSKSNHLEKIVWTRSMKRLFSLVGKCLEHKEPILLVGETGCSKTTICQLYSILN
Sbjct: 1396 SENDSELSKSNHLEKIVWTRSMKRLFSLVGKCLEHKEPILLVGETGCSKTTICQLYSILN 1455
Query: 542 KQKLHILNCHQHTETADFIGG 604
KQKLHILNCHQHTETADFIGG
Sbjct: 1456 KQKLHILNCHQHTETADFIGG 1476
Score = 316 bits (810), Expect = 9e-85
Identities = 161/174 (92%), Positives = 161/174 (92%)
Frame = +2
Query: 638 ALGIPLESLTRTMIDFHNQIFTQLSSTIENPCTLSQLLYWGKLILDQLQRGFSLLNSIRN 817
ALGIPLESLTRTMIDFHNQIFTQLSSTIENPCTLSQLLYWGKLILDQLQRGFSLLNSIRN
Sbjct: 2474 ALGIPLESLTRTMIDFHNQIFTQLSSTIENPCTLSQLLYWGKLILDQLQRGFSLLNSIRN 2533
Query: 818 SMEQIYIRPRRHLTQRQLVTNIFNSIFNESAIKSILCEDQTVLGIYPHFIKGKDYVTDSI 997
SMEQIYIRPRRHLTQRQLVTNIFNSIFNESAIKSILCEDQTVLGIYPHFIKGKDYVTDSI
Sbjct: 2534 SMEQIYIRPRRHLTQRQLVTNIFNSIFNESAIKSILCEDQTVLGIYPHFIKGKDYVTDSI 2593
Query: 998 STTMKMNYQFFEYYLKRLMNSLXXXXXXXXXXXXXDESNYKISAKFLIENINSS 1159
STTMKMNYQFFEYYLKRLMNSL DESNYKISAKFLIENINSS
Sbjct: 2594 STTMKMNYQFFEYYLKRLMNSLSSSSSSSSQQQQQDESNYKISAKFLIENINSS 2647
Score = 55.8 bits (133), Expect = 3e-06
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +2
Query: 362 SENDSELSKSNHLEKIVWTRSMKRLFSLVGKCLEHKEPILLVGETGCSKTTICQLYSILN 541
S+ DS ++K H T + RL + ++ EPILLVGETG KT++ Q +
Sbjct: 649 SQQDSGVTK--HGNVFAHTMNSLRLMEKISISIQFNEPILLVGETGTGKTSVVQYIADQL 706
Query: 542 KQKLHILNCHQHTETADFIGG 604
QKL +LN +Q ++++D IGG
Sbjct: 707 NQKLVVLNLNQQSDSSDLIGG 727
Score = 38.1 bits (87), Expect = 0.60
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 410 VWTRSMKRLFSLVGKCL-EHKEPILLVGETGCSKTTICQLYSILNKQKLHILNCHQHTET 586
+ T S+K S + + L K PILL G T KT++ + +I + +N H+HT+
Sbjct: 1108 ILTPSIKSNLSNIARVLVSRKHPILLQGPTSSGKTSMVEYLAIRTGHRFIRINNHEHTDL 1167
Query: 587 ADFIG 601
+++G
Sbjct: 1168 QEYLG 1172
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,576,424,585
Number of extensions: 31645944
Number of successful extensions: 69400
Number of sequences better than 10.0: 68
Number of HSP's gapped: 69320
Number of HSP's successfully gapped: 121
Length of query: 386
Length of database: 1,051,180,864
Length adjustment: 130
Effective length of query: 256
Effective length of database: 630,428,194
Effective search space: 161389617664
Effective search space used: 161389617664
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home