Dictyostelium discoideum cDNA Contig-U12287-1

Assembled

Chromosomal Location of Contig-U12287-1

Sequence Contig-U12287-1

CACTGTTGGC CTACTGGNAA AAAATATATA TTTGTTGTAT ATAAACATAT
TTATAATATA CAAAAAATAA AAATGGATCC ATTAGAAGAA TTAAATAAAG
CATCACGTAG TGTTAGAGTT TCAATTTATA ACACTACAAA TAAGAAATTA
GTATTAAAAT CTCACCCAAT CACATCTGGA TCATGGAGAG TACAACCACC
TGAAACTATT TTACCATTAA GTACAGTTGA ATTTGGATCA GAATCAAGTA
TGATGGGTAG TACAGAAGCA GGATCAATTT ATACAATTGA TGGTAGTGAA
GGAACATTTG AATTCTTTTG GAATAATCCA TATTTTGGTA GAAAAGGATT
TAGAAAGATT GCACCATCAG GTTATGAATC AGAGTATACC AATAGTGATA
CACATAATTG TGTATTGAAA TTCACAGTGA AGGAATTGGA TAATGGTATG
AAGGAGATTG AAGATATGGA AAAGGAGATT AGAGATTTAC AAACCTATAT
CAATGAGGCA GATAGCGGTG TCAAGGGTAT GACTAAGATG TCACAAGTTT
ATCAAATGCA AAAAGACGAT AAACAAGTGA AACTCGTTGA AAACAATATC
AAGG------ ----AGGCAT TGGATAAACA AGTTGAAACT AAAAAGAATG
AAATCGATTC ATTGAGAAAG AAAGAACAAA AAGTCATTCA AAAAGTGATC
GAATTGAAAA AGAGCTTAGG TCTTGGTGCA ACTGGTATTC AAACTAAAAA
GAAAGTAGTG GCCTTATTCG ATTATACAAA GAGTACAAAC GATGAATTGT
CAATCGTTGC TGGTGACATC ATCGATATCA TTCATGATGA AGATCCTGAT
TGGTATGGTG GTCAGTTAAA TGGTCAAATG GGTTACTTTC CAAAAGCTTT
TGTTGGTCCA TATGAGCAAC AACAAACTTC AACTTCAACT TCTGCATCCA
CCTCTTCTGC CACTGATAAC AATGGTGATA GTGTAAATCA ACCATCATCA
ACTGACAATG CTGATGAATA CACTGGTGAA GATTTTAGTC ATCTTTATCC
AAAGGCAAGA GTTGTTTATG ATCATATTCC ACAAGATGAT GGTGAAATCG
AATTGAAAAC AGGTGAAATT ATAACTGTTT ACTCATGGGA AAGTGATTAT
TGGTGGGAAG GTGTAAATAA TGGTAAAACT GGTTATTTCC CAAATACTTG
CGTTGATTGG GTTGAACCTG AAGCAAGTGT TACAGATTAT AGTNATTATT
CATATTATGA ATCAACNATT CTACAATTGA NATCAACAAC AACAACAACA
ATAAACAAAA CAATCATCTT TT

Translated Amino Acid Sequence Contig-U12287-1

HCWPTGKKYIFVVYKHIYNIQKIKMDPLEELNKASRSVRVSIYNTTNKKLVLKSHPITSG
SWRVQPPETILPLSTVEFGSESSMMGSTEAGSIYTIDGSEGTFEFFWNNPYFGRKGFRKI
APSGYESEYTNSDTHNCVLKFTVKELDNGMKEIEDMEKEIRDLQTYINEADSGVKGMTKM
SQVYQMQKDDKQVKLVENNIK---

---ALDKQVETKKNEIDSLRKKEQKVIQKVIELKKSLGLGATGIQTKKKVVALFDYTKST
NDELSIVAGDIIDIIHDEDPDWYGGQLNGQMGYFPKAFVGPYEQQQTSTSTSASTSSATD
NNGDSVNQPSSTDNADEYTGEDFSHLYPKARVVYDHIPQDDGEIELKTGEIITVYSWESD
YWWEGVNNGKTGYFPNTCVDWVEPEASVTDYSXYSYYESTILQLXSTTTTTINKTIIF

Homology Contig-U12287-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12287-1 (Contig-U12287-1Q) /CSM_Contig/Conti...  2389  0.0
Contig-U09714-1 (Contig-U09714-1Q) /CSM_Contig/Conti...    48  2e-05
Contig-U13706-1 (Contig-U13706-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U10968-1 (Contig-U10968-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U09729-1 (Contig-U09729-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U09640-1 (Contig-U09640-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U11510-1 (Contig-U11510-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11472-1 (Contig-U11472-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U10858-1 (Contig-U10858-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U10778-1 (Contig-U10778-1Q) /CSM_Contig/Conti...    42  0.002

Homology Contig-U12287-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ429803) Dictyostelium discoideum cDNA clone:ddv4n20, 3' e...  1148   0.0    1
(BJ419923) Dictyostelium discoideum cDNA clone:ddv37l15, 5' ...  1047   0.0    1
(BJ426246) Dictyostelium discoideum cDNA clone:ddv58i11, 5' ...   848   0.0    1
(BJ411566) Dictyostelium discoideum cDNA clone:ddv4n20, 5' e...   551   e-154  2
(AU271796) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   363   1e-95  1
(BJ411778) Dictyostelium discoideum cDNA clone:ddv5d20, 5' e...    38   2e-04  3
(DQ396875) Scenedesmus obliquus strain UTEX 393 chloroplast,...    40   0.11   8
(BJ344517) Dictyostelium discoideum cDNA clone:dda19i14, 3' ...    38   0.21   2
(BJ402763) Dictyostelium discoideum cDNA clone:dds17o22, 3' ...    38   0.23   2
(BJ346994) Dictyostelium discoideum cDNA clone:dda25d24, 3' ...    38   0.23   2

Homology Contig-U12287-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


BC134444_1(BC134444|pid:none) Bos taurus SH3-domain kinase bindi...    82   3e-14
(Q8R551) RecName: Full=SH3 domain-containing kinase-binding prot...    81   7e-14
AK038540_1(AK038540|pid:none) Mus musculus adult male hypothalam...    81   7e-14
AF472327_2(AF472327|pid:none) Mus musculus Ruk protein (Sh3kbp1)...    81   7e-14
(Q96B97) RecName: Full=SH3 domain-containing kinase-binding prot...    81   7e-14
CS300519_1(CS300519|pid:none) Sequence 27 from Patent EP1661986.       81   7e-14
BC015806_1(BC015806|pid:none) Homo sapiens SH3-domain kinase bin...    81   7e-14
AL732325_2(AL732325|pid:none) Human DNA sequence from clone RP11...    81   7e-14
AF255888_1(AF255888|pid:none) Rattus norvegicus adapter protein ...    81   1e-13
(Q925Q9) RecName: Full=SH3 domain-containing kinase-binding prot...    81   1e-13