Homology Contig-U12287-1 vs DNA
Query= Contig-U12287-1 (Contig-U12287-1Q) /CSM_Contig/Contig-U12287-1Q.Seq.d
(1322 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ429803) Dictyostelium discoideum cDNA clone:ddv4n20, 3' e... 1148 0.0 1
(BJ419923) Dictyostelium discoideum cDNA clone:ddv37l15, 5' ... 1047 0.0 1
(BJ426246) Dictyostelium discoideum cDNA clone:ddv58i11, 5' ... 848 0.0 1
(BJ411566) Dictyostelium discoideum cDNA clone:ddv4n20, 5' e... 551 e-154 2
(AU271796) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 363 1e-95 1
(BJ411778) Dictyostelium discoideum cDNA clone:ddv5d20, 5' e... 38 2e-04 3
(DQ396875) Scenedesmus obliquus strain UTEX 393 chloroplast,... 40 0.11 8
(BJ344517) Dictyostelium discoideum cDNA clone:dda19i14, 3' ... 38 0.21 2
(BJ402763) Dictyostelium discoideum cDNA clone:dds17o22, 3' ... 38 0.23 2
(BJ346994) Dictyostelium discoideum cDNA clone:dda25d24, 3' ... 38 0.23 2
(BJ402845) Dictyostelium discoideum cDNA clone:dds18o10, 3' ... 38 0.23 2
(BJ346762) Dictyostelium discoideum cDNA clone:dda24o21, 3' ... 38 0.24 2
(BJ428726) Dictyostelium discoideum cDNA clone:ddv1c05, 3' e... 38 0.24 2
(BJ373342) Dictyostelium discoideum cDNA clone:ddc2l24, 3' e... 38 0.24 2
(BJ345556) Dictyostelium discoideum cDNA clone:dda28f05, 3' ... 38 0.24 2
(BJ377825) Dictyostelium discoideum cDNA clone:ddc26h01, 3' ... 38 0.24 2
(BJ375211) Dictyostelium discoideum cDNA clone:ddc17i22, 3' ... 38 0.24 2
(BJ345940) Dictyostelium discoideum cDNA clone:dda29f18, 3' ... 38 0.24 2
(BJ374729) Dictyostelium discoideum cDNA clone:ddc16e04, 3' ... 38 0.24 2
(BJ344222) Dictyostelium discoideum cDNA clone:dda18f22, 3' ... 38 0.24 2
(BJ341101) Dictyostelium discoideum cDNA clone:dda5p02, 3' e... 38 0.24 2
(BJ375429) Dictyostelium discoideum cDNA clone:ddc18m18, 3' ... 38 0.24 2
(BJ386473) Dictyostelium discoideum cDNA clone:ddc58i12, 3' ... 38 0.25 2
(BJ372361) Dictyostelium discoideum cDNA clone:ddc12d12, 3' ... 38 0.25 2
(BJ377475) Dictyostelium discoideum cDNA clone:ddc24p13, 3' ... 38 0.25 2
(BJ374222) Dictyostelium discoideum cDNA clone:ddc6e05, 3' e... 38 0.25 2
(BJ372085) Dictyostelium discoideum cDNA clone:ddc11p04, 3' ... 38 0.25 2
(BJ344808) Dictyostelium discoideum cDNA clone:dda20f17, 3' ... 38 0.25 2
(BJ401125) Dictyostelium discoideum cDNA clone:dds22p04, 3' ... 38 0.25 2
(BJ373907) Dictyostelium discoideum cDNA clone:ddc5g08, 3' e... 38 0.26 2
(BJ372936) Dictyostelium discoideum cDNA clone:ddc15e02, 3' ... 38 0.27 2
(BJ329126) Dictyostelium discoideum cDNA clone:dda30j22, 5' ... 38 0.81 2
(FI297374) AdH1155-CPY2-G17TF AdH1 Arachis duranensis genomi... 48 0.92 1
(EJ625005) 1092963140539 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.92 1
(EJ610327) 1092962038588 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.92 1
(FN015360) Petunia axillaris subsp. axillaris EST, clone dr0... 48 0.92 1
(FN005981) Petunia axillaris subsp. axillaris EST, clone dr0... 48 0.92 1
(FP091226) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.8 2
(EK695955) 1092402620132 Global-Ocean-Sampling_GS-33-01-01-1... 46 3.6 1
(EK220282) 1095460138761 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.6 1
(BJ391394) Dictyostelium discoideum cDNA clone:dds13l14, 5' ... 32 3.7 3
(CJ479082) Macaca fascicularis mRNA, clone: QtrA-14292, 5' e... 36 3.8 2
(EK160842) 1095458030230 Global-Ocean-Sampling_GS-31-01-01-1... 36 4.5 2
(EU669439) Vitis hybrid cultivar Regent VRP1-1, VRP1-2, and ... 36 5.6 5
(AC123836) Mus musculus BAC clone RP23-367G3 from chromosome... 34 6.7 2
(BJ325625) Dictyostelium discoideum cDNA clone:dda1m18, 5' e... 38 8.6 2
>(BJ429803) Dictyostelium discoideum cDNA clone:ddv4n20, 3' end,
single read.
Length = 709
Score = 1148 bits (579), Expect = 0.0
Identities = 585/585 (100%)
Strand = Plus / Minus
Query: 696 tgatcgaattgaaaaagagcttaggtcttggtgcaactggtattcaaactaaaaagaaag 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tgatcgaattgaaaaagagcttaggtcttggtgcaactggtattcaaactaaaaagaaag 569
Query: 756 tagtggccttattcgattatacaaagagtacaaacgatgaattgtcaatcgttgctggtg 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tagtggccttattcgattatacaaagagtacaaacgatgaattgtcaatcgttgctggtg 509
Query: 816 acatcatcgatatcattcatgatgaagatcctgattggtatggtggtcagttaaatggtc 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 acatcatcgatatcattcatgatgaagatcctgattggtatggtggtcagttaaatggtc 449
Query: 876 aaatgggttactttccaaaagcttttgttggtccatatgagcaacaacaaacttcaactt 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aaatgggttactttccaaaagcttttgttggtccatatgagcaacaacaaacttcaactt 389
Query: 936 caacttctgcatccacctcttctgccactgataacaatggtgatagtgtaaatcaaccat 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 caacttctgcatccacctcttctgccactgataacaatggtgatagtgtaaatcaaccat 329
Query: 996 catcaactgacaatgctgatgaatacactggtgaagattttagtcatctttatccaaagg 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 catcaactgacaatgctgatgaatacactggtgaagattttagtcatctttatccaaagg 269
Query: 1056 caagagttgtttatgatcatattccacaagatgatggtgaaatcgaattgaaaacaggtg 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 caagagttgtttatgatcatattccacaagatgatggtgaaatcgaattgaaaacaggtg 209
Query: 1116 aaattataactgtttactcatgggaaagtgattattggtgggaaggtgtaaataatggta 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aaattataactgtttactcatgggaaagtgattattggtgggaaggtgtaaataatggta 149
Query: 1176 aaactggttatttcccaaatacttgcgttgattgggttgaacctgaagcaagtgttacag 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aaactggttatttcccaaatacttgcgttgattgggttgaacctgaagcaagtgttacag 89
Query: 1236 attatagtnattattcatattatgaatcaacnattctacaattga 1280
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 attatagtnattattcatattatgaatcaacnattctacaattga 44
Score = 40.1 bits (20), Expect(3) = 1.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 615 aggcattggataaacaagtt 634
||||||||||||||||||||
Sbjct: 709 aggcattggataaacaagtt 690
Score = 26.3 bits (13), Expect(3) = 1.9
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 1097 atcgaattgaaaa 1109
|||||||||||||
Sbjct: 626 atcgaattgaaaa 614
Score = 26.3 bits (13), Expect(3) = 1.9
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 741 aaactaaaaagaa 753
|||||||||||||
Sbjct: 688 aaactaaaaagaa 676
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,375,627,350
Number of extensions: 77589289
Number of successful extensions: 5950201
Number of sequences better than 10.0: 46
Length of query: 1322
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1298
Effective length of database: 104,103,628,548
Effective search space: 135126509855304
Effective search space used: 135126509855304
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home