Homology Contig-U12269-1 vs Protein

Query= Contig-U12269-1 (Contig-U12269-1Q) /CSM_Contig/Contig-U12269-1Q.Seq.d
         (1485 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116957_86(AC116957|pid:none) Dictyostelium discoideum chromoso...   149   2e-72
CP001349_1382(CP001349|pid:none) Methylobacterium nodulans ORS 2...    49   6e-04
CP001389_2024(CP001389|pid:none) Rhizobium sp. NGR234, complete ...    48   8e-04
CP000738_2005(CP000738|pid:none) Sinorhizobium medicae WSM419, c...    45   0.005
AL591688_2147(AL591688|pid:none) Sinorhizobium meliloti 1021 com...    45   0.009
CP001349_3517(CP001349|pid:none) Methylobacterium nodulans ORS 2...    44   0.015

>AC116957_86(AC116957|pid:none) Dictyostelium discoideum chromosome
           2 map 1685067-2090751 strain AX4, complete sequence.
          Length = 1265

 Score =  149 bits (377), Expect(2) = 2e-72
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = +1

Query: 163 MEHGNSLWGLRDCVPMLKGIALIGGSMFAGISIYIQTVEHPARSTLPTEFAVNEWRESFK 342
           MEHGNSLWGLRDCVPMLKGIALIGGSMFAGISIYIQTVEHPARSTLPTEFAVNEWRESFK
Sbjct: 1   MEHGNSLWGLRDCVPMLKGIALIGGSMFAGISIYIQTVEHPARSTLPTEFAVNEWRESFK 60

Query: 343 KAAPLQSSLAAVS 381
           KAAPLQSSLAAVS
Sbjct: 61  KAAPLQSSLAAVS 73

 Score =  148 bits (373), Expect(2) = 2e-72
 Identities = 75/110 (68%), Positives = 77/110 (70%)
 Frame = +3

Query: 399 LLLAPLQRHPCKTINKVIVKATEDSVRHCCQCNXXXXXXXXXXXXXIIPFTLLAIMPVNK 578
           L    + +  CKTINKVIVKATEDSVRHCCQCN             IIPFTLLAIMPVNK
Sbjct: 79  LTFGSIAKASCKTINKVIVKATEDSVRHCCQCNGLGWLLSGGLMLSIIPFTLLAIMPVNK 138

Query: 579 KLQSKELDTFADDTRQLLAQWGELHXXXXXXXXXXXXIMGYKIFRHSHLL 728
           KLQSKELDTFADDTRQLLAQWGELH            IMGYKIFRHSH L
Sbjct: 139 KLQSKELDTFADDTRQLLAQWGELHSVRSVLSLSAVAIMGYKIFRHSHFL 188

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,592,852,353
Number of extensions: 26926214
Number of successful extensions: 69405
Number of sequences better than 10.0: 6
Number of HSP's gapped: 69277
Number of HSP's successfully gapped: 11
Length of query: 495
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 362
Effective length of database: 620,718,517
Effective search space: 224700103154
Effective search space used: 224700103154
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)