Homology Contig-U12269-1 vs DNA
Query= Contig-U12269-1 (Contig-U12269-1Q) /CSM_Contig/Contig-U12269-1Q.Seq.d
(1485 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C92816) Dictyostelium discoideum slug cDNA, clone SSF379. 664 0.0 4
(C92403) Dictyostelium discoideum slug cDNA, clone SSE766. 664 0.0 3
(C90262) Dictyostelium discoideum slug cDNA, clone SSI513. 664 0.0 3
(BJ384319) Dictyostelium discoideum cDNA clone:ddc49d04, 3' ... 634 0.0 3
(C90206) Dictyostelium discoideum slug cDNA, clone SSI247. 656 0.0 3
(AU262816) Dictyostelium discoideum vegetative cDNA clone:VS... 664 0.0 3
(C93153) Dictyostelium discoideum slug cDNA, clone SSM687. 632 0.0 3
(AU038237) Dictyostelium discoideum slug cDNA, clone SSH454. 664 0.0 3
(AU039155) Dictyostelium discoideum slug cDNA, clone SSM454. 664 0.0 3
(C89697) Dictyostelium discoideum slug cDNA, clone SSG154. 664 0.0 3
(C94079) Dictyostelium discoideum slug cDNA, clone SSG381. 664 0.0 3
(AU038075) Dictyostelium discoideum slug cDNA, clone SSH238. 644 0.0 2
(C92736) Dictyostelium discoideum slug cDNA, clone SSF173. 664 0.0 3
(C90150) Dictyostelium discoideum slug cDNA, clone SSI150. 656 0.0 3
(C89803) Dictyostelium discoideum slug cDNA, clone SSG174. 664 0.0 2
(C92771) Dictyostelium discoideum slug cDNA, clone SSF326. 593 0.0 3
(AU037639) Dictyostelium discoideum slug cDNA, clone SSE119. 674 0.0 1
(C84889) Dictyostelium discoideum slug cDNA, clone SSD383. 632 e-177 1
(AU061111) Dictyostelium discoideum slug cDNA, clone SLD243. 569 e-157 1
(AU052392) Dictyostelium discoideum slug cDNA, clone SLD243. 551 e-152 1
(AU036957) Dictyostelium discoideum slug cDNA, clone SSB871. 406 e-108 1
(AU061582) Dictyostelium discoideum slug cDNA, clone SLE708. 377 e-100 1
(C94273) Dictyostelium discoideum slug cDNA, clone SSK726. 274 1e-68 1
(AU074848) Dictyostelium discoideum slug cDNA, clone SSM242. 264 9e-66 1
(C94504) Dictyostelium discoideum slug cDNA, clone SSL112. 242 3e-59 1
(C93698) Dictyostelium discoideum slug cDNA, clone SSL621. 107 8e-57 4
(AU072670) Dictyostelium discoideum slug cDNA, clone SSA494. 206 2e-48 1
(AU038660) Dictyostelium discoideum slug cDNA, clone SSL314. 202 3e-47 1
(AU072291) Dictyostelium discoideum slug cDNA, clone SSE119. 192 3e-44 1
(AU074711) Dictyostelium discoideum slug cDNA, clone SSL621. 190 1e-43 1
(AU072137) Dictyostelium discoideum slug cDNA, clone SSD496. 157 3e-39 2
(AU072656) Dictyostelium discoideum slug cDNA, clone SSA476. 174 7e-39 1
(AU071860) Dictyostelium discoideum slug cDNA, clone SSC649. 170 1e-38 2
(GR582202) CBZZ2000.g1 CBZZ Dictyostelium purpureum 18 hr st... 52 9e-10 3
(GR577495) CBXW561.b1 CBXW Dictyostelium purpureum 6 hr vege... 52 2e-09 3
(GR571819) CBTG2215.g1 CBTG Dictyostelium purpureum 12 hr ve... 52 2e-09 3
(GR571818) CBTG2215.b1 CBTG Dictyostelium purpureum 12 hr ve... 52 2e-09 3
(AC118884) Rattus norvegicus clone CH230-481K21, WORKING DRA... 46 4.1 1
(AC115659) Rattus norvegicus clone CH230-361G14, WORKING DRA... 46 4.1 1
>(C92816) Dictyostelium discoideum slug cDNA, clone SSF379.
Length = 728
Score = 664 bits (335), Expect(4) = 0.0
Identities = 335/335 (100%)
Strand = Plus / Plus
Query: 427 cctgcaagacaatcaacaaagtaatcgtcaaagccacagaagattcagttcgtcattgtt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 cctgcaagacaatcaacaaagtaatcgtcaaagccacagaagattcagttcgtcattgtt 305
Query: 487 gccaatgtaatggtttaggttggttgctaagtggtggtttaatgctttccattattccat 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gccaatgtaatggtttaggttggttgctaagtggtggtttaatgctttccattattccat 365
Query: 547 tcactttattagccattatgccagttaataagaaattacaatccaaagaacttgatacct 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tcactttattagccattatgccagttaataagaaattacaatccaaagaacttgatacct 425
Query: 607 ttgctgatgatactcgtcaattattagctcaatggggtgaattacattcagttcgttcag 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttgctgatgatactcgtcaattattagctcaatggggtgaattacattcagttcgttcag 485
Query: 667 ttctttcactctctgcggttgcaattatgggttacaaaatctttagacactcccatttgt 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ttctttcactctctgcggttgcaattatgggttacaaaatctttagacactcccatttgt 545
Query: 727 taattaaatcttaaaaacatgttatcattaagatg 761
|||||||||||||||||||||||||||||||||||
Sbjct: 546 taattaaatcttaaaaacatgttatcattaagatg 580
Score = 317 bits (160), Expect(4) = 0.0
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 222 tgcattaattggtggatcaatgtttgcaggtattagtatttatattcaaactgtcgaaca 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 tgcattaattggtggatcaatgtttgcaggtattagtatttatattcaaactgtcgaaca 102
Query: 282 tccagctcgttcaacattaccaactgaatttgcagttaatgaatggcgtgaaagttttaa 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tccagctcgttcaacattaccaactgaatttgcagttaatgaatggcgtgaaagttttaa 162
Query: 342 aaaggccgctccattacaatcttctcttgctgcagtttct 381
||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 aaaggccgctccattacaatcttctcttgctgcagtttct 202
Score = 91.7 bits (46), Expect(4) = 0.0
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 382 tggtatcgcttcgttgcttacttttggctccattgcaaaggcatcc 427
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tggtatcgcttcgttgcttacttttggctccattgcaaaggcatcc 247
Score = 85.7 bits (43), Expect(4) = 0.0
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 179 cattgtggggattaagagattgtgtaccaatgttaaaaggtat 221
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattgtggggattaagagattgtgtaccaatgttaaaaggtat 43
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 852,468,964
Number of extensions: 46337764
Number of successful extensions: 3514293
Number of sequences better than 10.0: 39
Length of query: 1485
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1461
Effective length of database: 104,103,628,548
Effective search space: 152095401308628
Effective search space used: 152095401308628
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home