Homology Contig-U12236-1 vs Protein

Query= Contig-U12236-1 (Contig-U12236-1Q) /CSM_Contig/Contig-U12236-1Q.Seq.d
         (1861 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM920431_1540(AM920431|pid:none) Penicillium chrysogenum Wiscons...   218   5e-55
AM920437_1895(AM920437|pid:none) Penicillium chrysogenum Wiscons...   187   1e-45
CU638743_122(CU638743|pid:none) Podospora anserina genomic DNA c...   149   4e-34
AE015928_4406(AE015928|pid:none) Bacteroides thetaiotaomicron VP...   142   3e-32
CU633900_662(CU633900|pid:none) Podospora anserina genomic DNA c...   139   5e-31
AM746676_7829(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...   127   1e-27
CP000875_3836(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ...   113   2e-23
CP000113_2189(CP000113|pid:none) Myxococcus xanthus DK 1622, com...   105   4e-21
(Q5UQ60) RecName: Full=Uncharacterized protein L662;  &AY653733_...    94   2e-17
AM746676_1988(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...    73   4e-11
CP000969_1569(CP000969|pid:none) Thermotoga sp. RQ2, complete ge...    45   0.007
AE000512_1204(AE000512|pid:none) Thermotoga maritima MSB8, compl...    43   0.034
CP000702_1524(CP000702|pid:none) Thermotoga petrophila RKU-1, co...    43   0.045
AE017244_695(AE017244|pid:none) Mycoplasma hyopneumoniae 7448, c...    40   0.29
AE017243_671(AE017243|pid:none) Mycoplasma hyopneumoniae J, comp...    38   1.4
DQ517337_15(DQ517337|pid:none) Trichoplusia ni ascovirus 2c, com...    37   1.9
CP001080_184(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1...    36   4.2
CP001080_10(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1,...    36   4.2
AY089847_1(AY089847|pid:none) Xiphorhynchus erythropygius aequat...    36   4.2
CP000246_469(CP000246|pid:none) Clostridium perfringens ATCC 131...    35   7.2
AE017282_2455(AE017282|pid:none) Methylococcus capsulatus str. B...    35   7.2
FM955427_1(FM955427|pid:none) Haemonchus contortus partial mRNA ...    35   7.2
CP000934_2871(CP000934|pid:none) Cellvibrio japonicus Ueda107, c...    35   7.2
BC004698_1(BC004698|pid:none) Mus musculus amylase 1, salivary, ...    35   9.4
BX248356_83(BX248356|pid:none) Corynebacterium diphtheriae gravi...    35   9.4
AP010822_4(AP010822|pid:none) Rallina eurizonoides sepiaria mito...    35   9.4
AY089842_1(AY089842|pid:none) Xiphorhynchus triangularis interme...    35   9.4
EF517651_1(EF517651|pid:none) Pionus tumultuosus seniloides vouc...    35   9.4
FJ848692_1(FJ848692|pid:none) Glyphorynchus spirurus haplotype G...    35   9.4
EF517650_1(EF517650|pid:none) Pionus tumultuosus seniloides vouc...    35   9.4
AY089852_1(AY089852|pid:none) Xiphorhynchus spixii elegans NADH ...    35   9.4

>AM920431_1540(AM920431|pid:none) Penicillium chrysogenum Wisconsin
            54-1255 complete genome, contig Pc00c16.
          Length = 394

 Score =  218 bits (556), Expect = 5e-55
 Identities = 110/305 (36%), Positives = 177/305 (58%), Gaps = 8/305 (2%)
 Frame = +3

Query: 804  ISKSVGGNSFVLSSFIAYSNHHSLIIRPDDIWMAILVQFSSYLNANAEQLRSKIVDFQGK 983
            IS S  G  FV + + AYS+HH+LI+RP+D+W +ILVQ S Y+ A++E+LR   V+ +G+
Sbjct: 57   ISPSTHG--FVRAVWHAYSDHHNLILRPEDVWFSILVQLSFYIQAHSEELREHFVEHEGQ 114

Query: 984  KQLVVRGGGKLMTADYQSLTIRMTQEIEKNIKDPSIREWANKPFSTTTPNDTMAASIALM 1163
            K L V   G + + D   L +++T  I++N+ DP +R+W    FSTTT  D + A++ +M
Sbjct: 115  KHLKVIEAGTIGSVDVGQLAVQLTGLIQQNVVDPELRDWIMPSFSTTTTTDEIVAAVIMM 174

Query: 1164 ATVKSYFDFKMCLMCGLPEVTLEGTLDDWVDIKNRIEKLKEFDFKDNKDGSVMKDWSEML 1343
             T++ YF ++M + CG+P VTL G  DDW  ++ RI+K+          G     ++ +L
Sbjct: 175  GTMQKYFSYEMEMTCGIPSVTLLGEKDDWEQLQGRIDKISTL-------GEEPTHFASLL 227

Query: 1344 SPIIDKIISSVNGKPD---IEWWNRIASQEGAGSGPRYISGWITAFCVFDNDGKWMGKNK 1514
             P+++K ++S +  P     ++WN+    E  GSGP Y+SGW+TAFC +D DGK +
Sbjct: 228  KPVLEKFVASFDDSPSPDVTDFWNQCVHFESMGSGPNYLSGWVTAFCFWDTDGKRL---- 283

Query: 1515 ERHEFGGGKFNTDWI-----FVNTNDVPRGFLFVPVKIDDNGTEYNTEFFAGHMAVSTLN 1679
                   G    +W       +NT+D+P G + VPVK++DNG E  T   AG + +   +
Sbjct: 284  ------YGPQGLEWAENTYPRINTSDIPIGCVSVPVKVNDNGCELKTSMVAGMVGIEAKS 337

Query: 1680 NSKTI 1694
             +  +
Sbjct: 338  GANAL 342

 Score =  110 bits (274), Expect = 2e-22
 Identities = 62/189 (32%), Positives = 111/189 (58%), Gaps = 8/189 (4%)
 Frame = +3

Query: 18  MSITFKVSDVEFNEFKGKDFDHKQLYLDPSMSFIKTQPKE-RKIVRTSI-------KEGI 173
           M +T K SD E   + G   ++ + +L  +    KT+    ++I+++SI       +  I
Sbjct: 1   MPVTLKTSDKEPVAWTGWRCENAENFLKDAC---KTEYYRCKQILQSSITRLPDASQTHI 57

Query: 174 SKSVGGNSFILSSLQAYNNHHGLTIKPDDVWIAILVQFSLYLNENSEKLRNKIVDFEGKK 353
           S S  G  F+ +   AY++HH L ++P+DVW +ILVQ S Y+  +SE+LR   V+ EG+K
Sbjct: 58  SPSTHG--FVRAVWHAYSDHHNLILRPEDVWFSILVQLSFYIQAHSEELREHFVEHEGQK 115

Query: 354 QLEVVGGGTLMTANYEQLTNLMTKQIEKNIKDPSIREWANKPFTTSTPNDTMAASIALMA 533
            L+V+  GT+ + +  QL   +T  I++N+ DP +R+W    F+T+T  D + A++ +M
Sbjct: 116 HLKVIEAGTIGSVDVGQLAVQLTGLIQQNVVDPELRDWIMPSFSTTTTTDEIVAAVIMMG 175

Query: 534 SVKNFFEYK 560
           +++ +F Y+
Sbjct: 176 TMQKYFSYE 184

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,829,728,342
Number of extensions: 57294221
Number of successful extensions: 176692
Number of sequences better than 10.0: 31
Number of HSP's gapped: 176589
Number of HSP's successfully gapped: 40
Length of query: 620
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 485
Effective length of database: 614,245,399
Effective search space: 297909018515
Effective search space used: 297909018515
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)