Dictyostelium discoideum cDNA Contig-U12231-1

Assembled

Chromosomal Location of Contig-U12231-1

Sequence Contig-U12231-1

AAAATAAAAA AAAAAAGTAA AGATAATAAA AAAAAAAAAA AAAAAACTAA
TTCACATATA CATAATATAT ATTGTATAGG AGTAATACAG TATGGGTATC
AATTTTAGTT GTCTACCCGA TTATAGTGGA CAAACTGGTG ATCAAGACAA
TTCTAAACCA AATAAACCTA TAGCGTTTAT AGATGCAACT GAACAAGTTT
CTAAACCAAA GGTTTCAACA TTAGATAAAT TTGATTTTGA TGATGAAAAA
GATATAAACC CAAAATCAAT TTCACAAACT AAAACAGATA ATAATAATAA
AAATAATAAT AATAATAAAG TAACAACTAC AAATAATAAT AATAATAATA
ATAATAATAA TA-------- --ACGAAAAT GAAAATAAAG TAACAGTTGA
CCTTAGTAAT GTTCCATTAA GTGCACCAGC AAAATCAGCA ATGACATTAG
GAGGTTTAAA AAAACAATTA CCTTTAAAAC CAACATTAAC AGAAGAACAA
ATTAAAGAAT TACAATTAAA AAATAAAACT TTAATTGAAA AACAAAGCCA
ACAACCATCA CAACAACAAC CACATCAACC ACAACAACAA TATATATCAC
CAGAGAAACA AGCATCAATT GAAACACCAA ATAAAATTAA ATTTTCAAAT
AATGAAGACA CATTCAATAA TACAAGTTAC ACTCAACCAG AAGGTGATTG
GGATAACGAT GATGATATAA CATTTGATGA TGATAATATA ATTGATAATT
TAGATCAACA ACAACAACAA CAACAACAAC AACAACAACA ACAATTAGAA
GAAAAAGAAG AAAAAGAAGA AAAAGAAGTA GTAAGAGAAG TTTTTATACC
AACACCTAAA AAATCAACAA TCATTTGGAA TGATGATGAT GATGGTTTTG
GTGAATAAAT AATTAAATTT TGTACAAAAA TAAAAATAAA TAAAAAGAAT
ATTAATAAAA TAAAAA

Translated Amino Acid Sequence Contig-U12231-1

k*kkkvkiikkkkkklihiyiiyiv*e*YSMGINFSCLPDYSGQTGDQDNSKPNKPIAFI
DATEQVSKPKVSTLDKFDFDDEKDINPKSISQTKTDNNNKNNNNNKVTTTNNNNNNNNNN
---

---ENENKVTVDLSNVPLSAPAKSAMTLGGLKKQLPLKPTLTEEQIKELQLKNKTLIEKQ
SQQPSQQQPHQPQQQYISPEKQASIETPNKIKFSNNEDTFNNTSYTQPEGDWDNDDDITF
DDDNIIDNLDQQQQQQQQQQQQQLEEKEEKEEKEVVREVFIPTPKKSTIIWNDDDDGFGE
*iikfctkikinkkninkik

Homology Contig-U12231-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12231-1 (Contig-U12231-1Q) /CSM_Contig/Conti...   478  e-135
Contig-U14907-1 (Contig-U14907-1Q) /CSM_Contig/Conti...   149  7e-36
Contig-U06507-1 (Contig-U06507-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U13612-1 (Contig-U13612-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U09043-1 (Contig-U09043-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U05646-1 (Contig-U05646-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U04139-1 (Contig-U04139-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U11450-1 (Contig-U11450-1Q) /CSM_Contig/Conti...    38  0.017
Contig-U11355-1 (Contig-U11355-1Q) /CSM_Contig/Conti...    38  0.017
Contig-U08780-1 (Contig-U08780-1Q) /CSM_Contig/Conti...    38  0.017

Homology Contig-U12231-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C93076) Dictyostelium discoideum slug cDNA, clone SSF746.        206   e-122  3
(AU073031) Dictyostelium discoideum slug cDNA, clone SSF746.      385   e-102  1
(AU267174) Dictyostelium discoideum vegetative cDNA clone:VS...   206   3e-63  2
(AU269830) Dictyostelium discoideum vegetative cDNA clone:VS...   125   4e-24  1
(AU269831) Dictyostelium discoideum vegetative cDNA clone:VS...    70   5e-12  2
(AC187965) Canis Familiaris, clone XX-97G9, complete sequence.     50   0.17   1
(CE635784) tigr-gss-dog-17000366748820 Dog Library Canis lup...    50   0.17   1
(AC189024) Rhesus macaque BAC clone CH250-84H12 from chromos...    36   0.37   2
(EB197890) PEG001-C-006317-301 Non-Normalized Pedal-Pleural ...    38   0.59   2
(DY885557) CeleSEQ845 Cunninghamella elegans pBluescript (Ec...    42   0.62   2

Homology Contig-U12231-1 vs Protein