<Clone: Contig-U12218-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U12218-1

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Assembled

Chromosomal Location of Contig-U12218-1

< more Chromosomal info >

Chromosome Number 2
Length 8467578
Start Poin 7,959,034
End Point 7,958,477
Strand MINUS

Sequence Contig-U12218-1

ATTTTTTTTT TTTTTTTAAT TTATTTTTTT TTTGTTTTGA AAATAAAAAT
AAATAATTAC TATGAAAGTT CTTGTTAAAC AATTAATGAG TAAATCATTA
TTTACTATTA ATTTAGATAC AACTTTAGAT GTTGCCTTAA AAAGTTTAAA
TGCCAATTCA ATTCATAGAT TACCAGTAGT TGACAATGAC GGTAATCTAA
AAGGAATTAT CACAGATAGA GATTTAAGAT TAGCAACTGA TTCACCATTT
CTTCCAGAGA ATAATGAAGA TAGATTGGAA AAATTAAGAC TTCACAAAGT
TTCTTCTATT ATGAAACAAA ATCCAGTTAC TATCGAAGAT TTTTCTCCAG
TTGTAGAGGC AGCAAAATTA ATGAGAGTTA CAAATGTAGG AGGATTACCC
GTATTAGATA AAAAAGGTCG TTTAATTGGA ATGGTAACAA GATCTGACCT
ATTGGACTTA TTAATTAAAG TTTTAGAGCC AGTACCACCA CAAAGTTAAA
AATAAAAAAA AAATAAAAAA AAAAAAAAAA ATAATAGATA ATTTTATTTA
TTTGTTTTAT TTTTTAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAA--- -------ATT
TGCTATACCC ATCAAAAGAG ATAATCAAAA AATATCTTTC TCTGTGGAAG
TAAACGAAAA AATCCCTCAA AATTTAAATG CTCCCTATNA TATTCAAGTT
AGAAAAATAT GTGATCATGT TTTAAATAAT TTTTTTATTA ATCCGAATAA
TAACAATAAT AATAATAGTA GTGTCAACAA TGATTTACCA AAAGGTGAAG
AATTTTTTGA AATTTGTTTA CAAAATAAGA TTTTATNACC CCATTATACA
TTAGGAACTG TCAAATCCTT CTTTTGGAAA CAAAATAGTA CAATTCCTTN
AACTGCTCGT GTAAAGGCTC AATATATAAA TGAAACAGAG TTAGTGAAAT
ATTTAAAACA ATNATCATTA AATCATAATA AAAAATAATN AATTATTTTT
TGTTTCTCTC TAATAAAAAA AAAAAA

Translated Amino Acid Sequence Contig-U12218-1

<All Frames> 
fffffnlfffcfenknk*ll*kfllnn**vnhyllli*iql*mlp*kv*mpiqfidyq*l
tmtvi*kelsqiei*d*qlihhffqrimkidwkn*dftkflll*nkiqllskiflql*rq
qn**elqm*edypy*ikkvv*lew*qdltywty*lkf*SQYHHKVKNKKKIKKKKKIIDN
FIYLFYFLKKKKKKKKKKKKKKKKKKKKKKK---

---FAIPIKRDNQKISFSVEVNEKIPQNLNAPYXIQVRKICDHVLNNFFINPNNNNNNNS
SVNNDLPKGEEFFEICLQNKILXPHYTLGTVKSFFWKQNSTIPXTARVKAQYINETELVK
YLKQXSLNHNKK*xiifcfslikkk


Homology Contig-U12218-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U12218-1 (Contig-U12218-1Q) /CSM_Contig/Conti...   910  0.0
Contig-U14166-1 (Contig-U14166-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U13811-1 (Contig-U13811-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U12966-1 (Contig-U12966-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U12158-1 (Contig-U12158-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U11731-1 (Contig-U11731-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U11304-1 (Contig-U11304-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U11191-1 (Contig-U11191-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U10836-1 (Contig-U10836-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U10521-1 (Contig-U10521-1Q) /CSM_Contig/Conti...    40  0.005


Homology Contig-U12218-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(C94019) Dictyostelium discoideum slug cDNA, clone SSK710.        894   0.0    2
(C93957) Dictyostelium discoideum slug cDNA, clone SSC856.        904   0.0    1
(C92333) Dictyostelium discoideum slug cDNA, clone SSD873.        835   0.0    2
(AU265580) Dictyostelium discoideum vegetative cDNA clone:VS...   878   0.0    1
(AU268957) Dictyostelium discoideum vegetative cDNA clone:VS...   835   0.0    1
(AU037617) Dictyostelium discoideum slug cDNA, clone SSD857.      466   0.0    2
(C92221) Dictyostelium discoideum slug cDNA, clone SSD251.        617   e-172  1
(AU072812) Dictyostelium discoideum slug cDNA, clone SSF143.      476   e-130  1
(AU072327) Dictyostelium discoideum slug cDNA, clone SSE203.      476   e-130  1
(AU072261) Dictyostelium discoideum slug cDNA, clone SSD857.      476   e-130  1


Homology Contig-U12218-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


CT009609_17(CT009609|pid:none) Desulfococcus multivorans vrl isl...    92   2e-17
CP000527_534(CP000527|pid:none) Desulfovibrio vulgaris subsp. vu...    92   4e-17
AE017285_2761(AE017285|pid:none) Desulfovibrio vulgaris subsp. v...    92   4e-17
CP001337_2564(CP001337|pid:none) Chloroflexus aggregans DSM 9485...    90   1e-16
CP001087_2848(CP001087|pid:none) Desulfobacterium autotrophicum ...    89   3e-16
CP000702_1582(CP000702|pid:none) Thermotoga petrophila RKU-1, co...    87   1e-15
CP000916_1430(CP000916|pid:none) Thermotoga neapolitana DSM 4359...    85   5e-15
CP000141_173(CP000141|pid:none) Carboxydothermus hydrogenoforman...    85   5e-15
CP000804_3679(CP000804|pid:none) Roseiflexus castenholzii DSM 13...    83   1e-14
CP000969_1644(CP000969|pid:none) Thermotoga sp. RQ2, complete ge...    83   2e-14


<Clone: Contig-U12218-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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