Homology Contig-U12188-1 vs Protein

Query= Contig-U12188-1 (Contig-U12188-1Q) /CSM_Contig/Contig-U12188-1Q.Seq.d
         (1316 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL111168_129(AL111168|pid:none) Campylobacter jejuni subsp. jeju...    37   1.6
CP000812_35(CP000812|pid:none) Thermotoga lettingae TMO, complet...    37   2.1
AF499596_28(AF499596|pid:none) Phthorimaea operculella granulovi...    36   2.7
AM295250_2168(AM295250|pid:none) Staphylococcus carnosus subsp. ...    36   3.5
(Q59031) RecName: Full=Uncharacterized protein MJ1637; Flags: Pr...    36   3.5
CR548612_182(CR548612|pid:none) Paramecium tetraurelia macronucl...    36   3.5
T33291(T33291)hypothetical protein F26D11.6 - Caenorhabditis ele...    35   4.6
CP001393_1103(CP001393|pid:none) Anaerocellum thermophilum DSM 6...    35   4.6
AE016819_936(AE016819|pid:none) Ashbya gossypii (= Eremothecium ...    35   4.6
CP001102_1334(CP001102|pid:none) Candidatus Amoebophilus asiatic...    35   4.6
CP000721_1908(CP000721|pid:none) Clostridium beijerinckii NCIMB ...    35   6.0
(Q8TE76) RecName: Full=MORC family CW-type zinc finger protein 4...    35   6.0
CP000123_802(CP000123|pid:none) Mycoplasma capricolum subsp. cap...    35   6.0
CU928174_15(CU928174|pid:none) Zygosaccharomyces rouxii strain C...    35   6.0
AK056235_1(AK056235|pid:none) Homo sapiens cDNA FLJ31673 fis, cl...    35   6.0
CR940347_490(CR940347|pid:none) Theileria annulata strain Ankara...    35   7.8
AE014187_59(AE014187|pid:none) Plasmodium falciparum 3D7 chromos...    35   7.8
AM910990_191(AM910990|pid:none) Plasmodium knowlesi strain H chr...    35   7.8
AM260522_500(AM260522|pid:none) Helicobacter acinonychis str. Sh...    35   7.8
(Q54KI4) RecName: Full=Epidermal growth factor receptor substrat...    35   7.8

>AL111168_129(AL111168|pid:none) Campylobacter jejuni subsp. jejuni
           NCTC 11168 complete genome.  &C81431(C81431)
          Length = 783

 Score = 37.0 bits (84), Expect = 1.6
 Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
 Frame = +3

Query: 6   VKQIKLSKVFKQQSINHYS-GEFKKVQDEFHVYKQLIEERRLYLLKFIENQFKSEQLQL- 179
           VK IK+  +F +  ++  S  EFK+    + ++K+L+E + L L+K IEN      + L
Sbjct: 150 VKNIKIVNIFSKNVLDLISLNEFKEKLKIYQIHKKLLENKNLSLVKMIEN----IAIPLW 205

Query: 180 DEQSKTLENQADIIKKCLTDI---KSQDKNK----LKIVRNLSKINIK 302
           ++     +N  D +K   ++    K  DKN     ++++ N+SK  +K
Sbjct: 206 NKYGMDSQNYIDKMKNLFSEYLNKKKLDKNTINKYIQVIENISKEFLK 253

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,752,461,860
Number of extensions: 31401921
Number of successful extensions: 79340
Number of sequences better than 10.0: 20
Number of HSP's gapped: 79262
Number of HSP's successfully gapped: 20
Length of query: 438
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 306
Effective length of database: 623,955,076
Effective search space: 190930253256
Effective search space used: 190930253256
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)