<Clone: Contig-U12155-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U12155-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U12155-1

< more Chromosomal info >

Chromosome Number 3
Length 6358359
Start Poin 1,716,891
End Point 1,715,806
Strand MINUS

Sequence Contig-U12155-1

CTTTAAATAG AATGGAGAAA TTATCACAAT TTGATCAAAC ATCATTTTTG
AATTTAGTAT TTAGAGCAAT TAAACATGAT GATAATATTT CAAGATCAAN
GGCAGTTTTA AAGAGATTAA TACAATTTTC ATTCCACCAA ATAGTTTCAT
TCTCTGCTGC AACTTTAATT TTAGTTTCAG AATTAATTAA ATTTAATCCA
ATTTTTGGAA CAATGATAAC TGATATCGAA AAAAAATCA- ---------A
TTCTTAAAAA CATTTGGTGA TATTTCAAAT GCCAGTGGTG TTATTAATAA
AAAGAAAGGA TCNAATGTTG TTAAATTCGT TACTGATAAT GAAGAAATGG
ATAAAGTTTT GGGTTATAAA GAAGATGAAA ATGATTCAGA TGAAGATTTG
GAAGATTTAG ATGCTGAATA TAGTTATGAA GATTTGCAAG CTTCCGATTT
CGATGATGAA GAATTTGAAT CTGAAATTCC AAAATCAAAA AAACCAATTG
CTCCATCAAC TAAAAAATCA ACTAAAAATT CTCAAGAAGA TGATGATGAT
GATGAAGATG ATGAAGAATT TGATGTTAAT GATGAAGAAT TCGCTTCATT
AAATAATGAA GAATTTTTAG ATTCCATTCC AGATGATGAC GATGATGATG
ATGAAGATAA TGGTGAAGAT TTGGAAGAAG ATGAAGATTT GGAAGAAGAA
GACAATGTTG ATATTGATGA AGATGAAGAA GATTTCGATG ATGAGGATGG
TACAAATGTC GATACACCAG ATTTTGGTGA TGAAGAAGTT GAAGAAGAAG
AAGACGATGA TGTTCAAACT CCAGATTTTG GTGATGAGGA TGATGGTGAA
GAGGATGGAG AAGGAGAAGA AGAAGAAGAT GAAGAAAAAT CAGACTTCCT
TAAATCAATG CAAAATAATG ATGCTTTCAT GGATGCTGAT GATTTTGCTG
AAATGTTAGA AAAATCTGGT AGTTCAAATA GTAAATCGTC ATACAAAAAG
AAAGGTTCAA AATCATCTGC TGCACCACCA TCTAAAAAAT CAACTCCTTC
AAAACAACCA AAGAAATCCT CTACCTCAAA AAGAAAGAGA TTC

Translated Amino Acid Sequence Contig-U12155-1

<All Frames> 
LNRMEKLSQFDQTSFLNLVFRAIKHDDNISRSXAVLKRLIQFSFHQIVSFSAATLILVSE
LIKFNPIFGTMITDIEKKS---

---FLKTFGDISNASGVINKKKGSNVVKFVTDNEEMDKVLGYKEDENDSDEDLEDLDAEY
SYEDLQASDFDDEEFESEIPKSKKPIAPSTKKSTKNSQEDDDDDEDDEEFDVNDEEFASL
NNEEFLDSIPDDDDDDDEDNGEDLEEDEDLEEEDNVDIDEDEEDFDDEDGTNVDTPDFGD
EEVEEEEDDDVQTPDFGDEDDGEEDGEGEEEEDEEKSDFLKSMQNNDAFMDADDFAEMLE
KSGSSNSKSSYKKKGSKSSAAPPSKKSTPSKQPKKSSTSKRKRF


Homology Contig-U12155-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U12155-1 (Contig-U12155-1Q) /CSM_Contig/Conti...   515  e-146
Contig-U09273-1 (Contig-U09273-1Q) /CSM_Contig/Conti...    48  2e-05
Contig-U12498-1 (Contig-U12498-1Q) /CSM_Contig/Conti...    46  8e-05
Contig-U10767-1 (Contig-U10767-1Q) /CSM_Contig/Conti...    46  8e-05
Contig-U03565-1 (Contig-U03565-1Q) /CSM_Contig/Conti...    46  8e-05
Contig-U14688-1 (Contig-U14688-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U04099-1 (Contig-U04099-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U12283-1 (Contig-U12283-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11193-1 (Contig-U11193-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U01125-1 (Contig-U01125-1Q) /CSM_Contig/Conti...    42  0.001


Homology Contig-U12155-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ438947) Dictyostelium discoideum cDNA clone:ddv38p23, 3' ...   365   0.0    4
(BJ444885) Dictyostelium discoideum cDNA clone:ddv57b19, 3' ...   367   e-166  5
(AU061309) Dictyostelium discoideum slug cDNA, clone SLD729.      446   e-121  1
(BJ439587) Dictyostelium discoideum cDNA clone:ddv40n24, 3' ...   438   e-118  1
(AU052675) Dictyostelium discoideum slug cDNA, clone SLD729.      410   e-110  1
(EE608552) CHWL3938.b1_D01.ab1 CHW(LMS) silverleaf sunflower...    58   3e-04  2
(EE611860) CHWL9094.b1_K18.ab1 CHW(LMS) silverleaf sunflower...    58   3e-04  2
(AI967639) Ljirnpest08-641-b11 Ljirnp Lambda HybriZap two-hy...    38   7e-04  2
(CF075839) Hd_mx17_60F11_T7 Hypsibius dujardini mixed stage ...    36   0.001  3
(AC002983) Arabidopsis thaliana BAC T3F12 from chromosome IV...    42   0.011  5


Homology Contig-U12155-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


BC133489_1(BC133489|pid:none) Bos taurus CCAAT/enhancer binding ...    46   0.002
AC007390_3(AC007390|pid:none) Homo sapiens BAC clone RP11-423P10...    46   0.002
AB168175_1(AB168175|pid:none) Macaca fascicularis testis cDNA cl...    46   0.002
(Q03701) RecName: Full=CCAAT/enhancer-binding protein zeta; AltN...    46   0.002
AK312322_1(AK312322|pid:none) Homo sapiens cDNA, FLJ92633, highl...    46   0.002
AK158771_1(AK158771|pid:none) Mus musculus visual cortex cDNA, R...    46   0.003
(P53569) RecName: Full=CCAAT/enhancer-binding protein zeta; AltN...    46   0.003
CR859292_1(CR859292|pid:none) Pongo abelii mRNA; cDNA DKFZp468N0...    46   0.003
JC6067(JC6067;S65568;S65567) CCAAT-binding factor CBF1 - mouse  ...    46   0.003
AJ719280_1(AJ719280|pid:none) Gallus gallus mRNA for hypothetica...    45   0.006


<Clone: Contig-U12155-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Project Home