Homology Contig-U12098-1 vs DNA

Query= Contig-U12098-1 (Contig-U12098-1Q) /CSM_Contig/Contig-U12098-1Q.Seq.d
         (723 letters)

Database: ddbj_A
           108,600,042 sequences; 106,710,029,556 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ407399) Dictyostelium discoideum cDNA clone:dds38n10, 3' ...   755   0.0    1
(BJ384494) Dictyostelium discoideum cDNA clone:ddc49m13, 3' ...   424   e-114  1
(AU034523) Dictyostelium discoideum slug cDNA, clone SLC382.       58   2e-15  4
(C25557) Dictyostelium discoideum slug cDNA, clone SLA296.         58   5e-15  4
(BJ407306) Dictyostelium discoideum cDNA clone:dds38k02, 3' ...    58   5e-15  4
(BJ445250) Dictyostelium discoideum cDNA clone:ddv58m20, 3' ...    58   7e-15  4
(AU034130) Dictyostelium discoideum slug cDNA, clone SLB778.       58   7e-15  4
(BJ408333) Dictyostelium discoideum cDNA clone:dds45p11, 3' ...    58   8e-15  4
(BJ407614) Dictyostelium discoideum cDNA clone:dds43i06, 3' ...    58   8e-15  4
(AU052901) Dictyostelium discoideum slug cDNA, clone SLF291.       58   5e-04  1
(BJ395317) Dictyostelium discoideum cDNA clone:dds38n10, 5' ...    58   5e-04  1
(EU860108) Corydalus cornutus carbamoyl-phosphate synthase (...    46   1.9    1
(DU760775) ASNG3347.g2 HF200_10-06-02 uncultured marine micr...    46   1.9    1
(AM180355) Clostridium difficile 630 complete genome.              32   3.0    2
(BX323837) Zebrafish DNA sequence from clone DKEY-5N7 in lin...    44   7.7    1
(AC157593) Mus musculus BAC clone RP23-254B18 from chromosom...    44   7.7    1
(AC009055) Homo sapiens chromosome 16 clone RP11-256I9, comp...    44   7.7    1
(AC162430) Papio hamadryas clone RP41-113L13, WORKING DRAFT ...    44   7.7    1
(AC140973) Papio hamadryas clone RP41-171E5, WORKING DRAFT S...    44   7.7    1
(GS064337) SIC_Ba0130L15.F SIC_Ba Setaria italica genomic 5'...    44   7.7    1
(GS034456) SIC_Ba0061E01.R SIC_Ba Setaria italica genomic 3'...    44   7.7    1
(ER492670) 1093015332536 Global-Ocean-Sampling_GS-35-01-01-1...    44   7.7    1
(EK032432) 1092956082931 Global-Ocean-Sampling_GS-31-01-01-1...    44   7.7    1
(EB605323) AGENCOURT_56956620 D. grimshawi EST Drosophila gr...    44   7.7    1
(CD052329) EST1588 Zea mays sperm cell cDNA library Zea mays...    44   7.7    1
(BM417876) 952005H10.x9 952 - BMS tissue from Walbot Lab (re...    44   7.7    1
(BG415293) HVSMEk0005O06f Hordeum vulgare testa/pericarp EST...    44   7.7    1

>(BJ407399) Dictyostelium discoideum cDNA clone:dds38n10, 3' end,
           single read.
          Length = 587

 Score =  755 bits (381), Expect = 0.0
 Identities = 381/381 (100%)
 Strand = Plus / Minus


Query: 138 ttggacaatgtttttagcggtaccaattgctgccatatcatttgccgttcaaatgaaggt 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ttggacaatgtttttagcggtaccaattgctgccatatcatttgccgttcaaatgaaggt 528


Query: 198 acatccaagacaaatttgggtaatcatcattgcaagtgctttaggtatactttgtggtaa 257
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 acatccaagacaaatttgggtaatcatcattgcaagtgctttaggtatactttgtggtaa 468


Query: 258 ttggggtaataaattctttggtgaagatgttggttctttctttggttcttgtgcaatttg 317
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ttggggtaataaattctttggtgaagatgttggttctttctttggttcttgtgcaatttg 408


Query: 318 tatgttgggtaacctttatgcaagattatcaggaacttctgctgcagttccaattatgag 377
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tatgttgggtaacctttatgcaagattatcaggaacttctgctgcagttccaattatgag 348


Query: 378 tggtatcattttattagttcctggtagtatgggtgtaaaaggtttagttagtgtatcatc 437
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tggtatcattttattagttcctggtagtatgggtgtaaaaggtttagttagtgtatcatc 288


Query: 438 tggtgatatatcaggtggtattgttttctttgaaggaatgtttatgattgctgcatcttt 497
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tggtgatatatcaggtggtattgttttctttgaaggaatgtttatgattgctgcatcttt 228


Query: 498 aacaattggtttattagttgc 518
           |||||||||||||||||||||
Sbjct: 227 aacaattggtttattagttgc 207

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 520,383,860
Number of extensions: 28131774
Number of successful extensions: 2146219
Number of sequences better than 10.0: 28
Length of query: 723
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 699
Effective length of database: 104,103,628,548
Effective search space: 72768436355052
Effective search space used: 72768436355052
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)




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