Homology Contig-U12098-1 vs DNA
Query= Contig-U12098-1 (Contig-U12098-1Q) /CSM_Contig/Contig-U12098-1Q.Seq.d
(723 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ407399) Dictyostelium discoideum cDNA clone:dds38n10, 3' ... 755 0.0 1
(BJ384494) Dictyostelium discoideum cDNA clone:ddc49m13, 3' ... 424 e-114 1
(AU034523) Dictyostelium discoideum slug cDNA, clone SLC382. 58 2e-15 4
(C25557) Dictyostelium discoideum slug cDNA, clone SLA296. 58 5e-15 4
(BJ407306) Dictyostelium discoideum cDNA clone:dds38k02, 3' ... 58 5e-15 4
(BJ445250) Dictyostelium discoideum cDNA clone:ddv58m20, 3' ... 58 7e-15 4
(AU034130) Dictyostelium discoideum slug cDNA, clone SLB778. 58 7e-15 4
(BJ408333) Dictyostelium discoideum cDNA clone:dds45p11, 3' ... 58 8e-15 4
(BJ407614) Dictyostelium discoideum cDNA clone:dds43i06, 3' ... 58 8e-15 4
(AU052901) Dictyostelium discoideum slug cDNA, clone SLF291. 58 5e-04 1
(BJ395317) Dictyostelium discoideum cDNA clone:dds38n10, 5' ... 58 5e-04 1
(EU860108) Corydalus cornutus carbamoyl-phosphate synthase (... 46 1.9 1
(DU760775) ASNG3347.g2 HF200_10-06-02 uncultured marine micr... 46 1.9 1
(AM180355) Clostridium difficile 630 complete genome. 32 3.0 2
(BX323837) Zebrafish DNA sequence from clone DKEY-5N7 in lin... 44 7.7 1
(AC157593) Mus musculus BAC clone RP23-254B18 from chromosom... 44 7.7 1
(AC009055) Homo sapiens chromosome 16 clone RP11-256I9, comp... 44 7.7 1
(AC162430) Papio hamadryas clone RP41-113L13, WORKING DRAFT ... 44 7.7 1
(AC140973) Papio hamadryas clone RP41-171E5, WORKING DRAFT S... 44 7.7 1
(GS064337) SIC_Ba0130L15.F SIC_Ba Setaria italica genomic 5'... 44 7.7 1
(GS034456) SIC_Ba0061E01.R SIC_Ba Setaria italica genomic 3'... 44 7.7 1
(ER492670) 1093015332536 Global-Ocean-Sampling_GS-35-01-01-1... 44 7.7 1
(EK032432) 1092956082931 Global-Ocean-Sampling_GS-31-01-01-1... 44 7.7 1
(EB605323) AGENCOURT_56956620 D. grimshawi EST Drosophila gr... 44 7.7 1
(CD052329) EST1588 Zea mays sperm cell cDNA library Zea mays... 44 7.7 1
(BM417876) 952005H10.x9 952 - BMS tissue from Walbot Lab (re... 44 7.7 1
(BG415293) HVSMEk0005O06f Hordeum vulgare testa/pericarp EST... 44 7.7 1
>(BJ407399) Dictyostelium discoideum cDNA clone:dds38n10, 3' end,
single read.
Length = 587
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Minus
Query: 138 ttggacaatgtttttagcggtaccaattgctgccatatcatttgccgttcaaatgaaggt 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ttggacaatgtttttagcggtaccaattgctgccatatcatttgccgttcaaatgaaggt 528
Query: 198 acatccaagacaaatttgggtaatcatcattgcaagtgctttaggtatactttgtggtaa 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 acatccaagacaaatttgggtaatcatcattgcaagtgctttaggtatactttgtggtaa 468
Query: 258 ttggggtaataaattctttggtgaagatgttggttctttctttggttcttgtgcaatttg 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ttggggtaataaattctttggtgaagatgttggttctttctttggttcttgtgcaatttg 408
Query: 318 tatgttgggtaacctttatgcaagattatcaggaacttctgctgcagttccaattatgag 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tatgttgggtaacctttatgcaagattatcaggaacttctgctgcagttccaattatgag 348
Query: 378 tggtatcattttattagttcctggtagtatgggtgtaaaaggtttagttagtgtatcatc 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tggtatcattttattagttcctggtagtatgggtgtaaaaggtttagttagtgtatcatc 288
Query: 438 tggtgatatatcaggtggtattgttttctttgaaggaatgtttatgattgctgcatcttt 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tggtgatatatcaggtggtattgttttctttgaaggaatgtttatgattgctgcatcttt 228
Query: 498 aacaattggtttattagttgc 518
|||||||||||||||||||||
Sbjct: 227 aacaattggtttattagttgc 207
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 520,383,860
Number of extensions: 28131774
Number of successful extensions: 2146219
Number of sequences better than 10.0: 28
Length of query: 723
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 699
Effective length of database: 104,103,628,548
Effective search space: 72768436355052
Effective search space used: 72768436355052
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home