Dictyostelium discoideum cDNA Contig-U12091-1

Assembled

Chromosomal Location of Contig-U12091-1

Sequence Contig-U12091-1

AACAGTCAAT ATCAAATAAT TATTAATGTA ACCCTAATAA TAATAATAAA
AAAACAACAC ACAAACTATC AAATAAATAC TTAAAGAGAT AAAAAAAAAA
ATAATAAAAA AAAANTANTA AAAAAANTAA AAAAAAAACC TTTTTTGG--
--------AC ATAAACGGTG AATACCTCGA CTCCTAAATC GATGAAGACC
GTAGCAAACT GCGATAATTC ACTTGAATTG CAGCCTACTG GGATAGTTGA
AATGTTGAAC GCACATGATG ACATCGGTCC TTTCGGATTA GGTGTTATAC
TTGGGTGAGA GTGGTCATTA ATTTAAAAAA CAATTATAAA AACAACAAAT
ACAAAAATGA TTAAGAATAG AAAATTAGAT ATTACTTCAA CTAATGTTGC
TGGTATTGGA ACAGATTTAG ATAAAAAATG TAGATTGGAT GCAGCTTCAA
CTGAAGCTCA ATGGAAAGGT GTTGGTCAAG CACCAGGTCT CAAGATTTGG
AGAATTGAAA ATTTTAAAGT TGTCCCAGTT CCAGAATCAT CATATGGTAA
ATTCTATGAT GGTGATAGTT ATATCATTTT ACATACTTTT AAAGAAGGTA
ATTCACTTAA ACATGATATT CATTTCTTTT TAGGTACTTT TACTACTCAA
GATGAAGCTG GCACTGCTGC TTATAAAACA GTTGAATTAG ATGATTTCTT
AGGGTGGTGC ACCAATTCAA TATCGTCAAT GTCAATCATA TGAAAGTCCA
AGCTTTTTAT CATTATTCCC CAAAAATATT TCATTTTATC AGGGTGGTGT
TGAATCAGGA TTTTAATCAT GTTAAACCCA CCAGAATATA AACCAAGGAT
TATTACATAT TAGTGGTGAT AAGAATGCTA AAGTCGCTTG AAGTACCATT
GGCAACCAGT TCATTGAATA GTGGTGACTG TTTCCTTTTG GATGCAGGTT
TAACTATTTA TCAATTCAAT GGTAGTAAAT CAAGTCCACA AGAAAAGAAT
AAAGCCGCTG AAGTTGCACG TGCAATCGAT GCAGAAAGAA AAGGTTTACC
AAAAGTTGAA GTTTTCTGTG AAACCGATTC CGATATTCCA GCTGAATTTT
GGAAACTTTT AGGTGGAAAA GGTGCAATCG CTGCTAAACA CGAAACTGCC
CCAACCAAAT CTGAAAAAGT TTTATACAAA TTATCAGATG CATCTGGTTC
ACTTAAATTC TCTGAAGTTT CACGTGGTAA AATCAATAAA TCCTCATTAA
AATCTGAAGA TGTTTTCATC ATTGATTTAG GTAATGAAAT CTATACTTGG
ATCGGTTCAA AATCATCACC AAATGAAAAG AAAACAGCAT TCAGTCATGC
AACTCAATAC TTGGTAAACA ATAAACGTTG TGAATATACT CCAATAGTTA
GAGTTTTAGA AAATGGTACA AATCAATCAT TTGAAACTTT ATTATCTGCT
TAATAATAAA ACACAACAAC AACAACAACA CATTCAAAAA ATCAATTTTG
TATCATAAAA TAAAATAAAA TATAAACTTT ATATTATAAA AAAAAA

Translated Amino Acid Sequence Contig-U12091-1

nsqyqiiinvtliiiikkqhtnyqint*RDKKKNNKKKXXKKXKKKPFL---

---INGEYLDS*idedrsklr*ft*iaaywds*nvert**hrsfrircytwvrvvinlkn
nyknnkyknd*e*kiryyfn*ccwywnrfr*km*igcsfn*ssmercwsstrsqdlen*k
f*scpssriiiw*il*w**lyhftyf*rr*ft*t*ysflfryfyysr*swhccl*ns*ir
*flrvvhqfnivnvnhmkvqafyhyspkifhfirvvlnqdfnhvkptri*tkdyyilvvi
rmlkslevplatsslnsgdcflldagltiyqfngsksspqeknkaaevaraidaerkglp
kvevfcetdsdipaefwkllggkgaiaakhetaptksekvlyklsdasgslkfsevsrgk
inksslksedvfiidlgneiytwigsksspnekktafshatqylvnnkrceytpivrvle
ngtnqsfetllsa***ntttttthsknqfciik*nki*tlyykkk

Homology Contig-U12091-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U12091-1 (Contig-U12091-1Q) /CSM_Contig/Conti...  2185  0.0
Contig-U11252-1 (Contig-U11252-1Q) /CSM_Contig/Conti...   317  2e-86
Contig-U10846-1 (Contig-U10846-1Q) /CSM_Contig/Conti...   317  2e-86
Contig-U11413-1 (Contig-U11413-1Q) /CSM_Contig/Conti...   315  8e-86
Contig-U14096-1 (Contig-U14096-1Q) /CSM_Contig/Conti...   313  3e-85
Contig-U13829-1 (Contig-U13829-1Q) /CSM_Contig/Conti...   313  3e-85
Contig-U13591-1 (Contig-U13591-1Q) /CSM_Contig/Conti...   313  3e-85
Contig-U13298-1 (Contig-U13298-1Q) /CSM_Contig/Conti...   313  3e-85
Contig-U11677-1 (Contig-U11677-1Q) /CSM_Contig/Conti...   313  3e-85
Contig-U11364-1 (Contig-U11364-1Q) /CSM_Contig/Conti...   313  3e-85

Homology Contig-U12091-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(J03515) Slime mold (D.discoideum) severin mRNA, complete cds.   1132   0.0    8
(AU270443) Dictyostelium discoideum vegetative cDNA clone:VS...  1132   0.0    2
(AU034013) Dictyostelium discoideum slug cDNA, clone SLB806.     1132   0.0    2
(C93067) Dictyostelium discoideum slug cDNA, clone SSF734.       1132   0.0    2
(BJ436166) Dictyostelium discoideum cDNA clone:ddv30o05, 3' ...  1132   0.0    4
(BJ435976) Dictyostelium discoideum cDNA clone:ddv29p03, 3' ...  1132   0.0    3
(BJ434861) Dictyostelium discoideum cDNA clone:ddv25o01, 3' ...  1132   0.0    2
(BJ434589) Dictyostelium discoideum cDNA clone:ddv24h09, 3' ...  1132   0.0    2
(BJ434546) Dictyostelium discoideum cDNA clone:ddv24n06, 3' ...  1132   0.0    2
(BJ433985) Dictyostelium discoideum cDNA clone:ddv23e17, 3' ...  1132   0.0    4

Homology Contig-U12091-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


U70047_1(U70047|pid:none) Physarum polycephalum actin-binding pr...   148   6e-70
AJ621806_1(AJ621806|pid:none) Suberites ficus mRNA for gelsolin ...   127   3e-55
AM270354_42(AM270354|pid:none) Aspergillus niger contig An16c002...   139   5e-54
AM920435_1012(AM920435|pid:none) Penicillium chrysogenum Wiscons...   143   2e-51
AK318626_1(AK318626|pid:none) Arabidopsis thaliana AT3G57410 mRN...   104   4e-50
(O81645) RecName: Full=Villin-3;  &AF081203_1(AF081203|pid:none)...   104   4e-50
AY093052_1(AY093052|pid:none) Arabidopsis thaliana unknown prote...   104   4e-50
FN313917_1(FN313917|pid:none) Schistosoma japonicum isolate Anhu...   116   4e-50
E84845(E84845)probable villin 2 [imported] - Arabidopsis thaliana     104   1e-49
AE014297_14(AE014297|pid:none) Drosophila melanogaster chromosom...   103   1e-49