Homology Contig-U12067-1 vs Protein
Query= Contig-U12067-1 (Contig-U12067-1Q) /CSM_Contig/Contig-U12067-1Q.Seq.d
(2439 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54WR2) RecName: Full=Translational activator gcn1; AltName: Fu... 498 0.0
U77700_1(U77700|pid:none) Homo sapiens HsGCN1 mRNA, partial cds. 255 e-128
D86973_1(D86973|pid:none) Homo sapiens mRNA for KIAA0219 gene, p... 254 e-128
(Q99736) RecName: Full=Translational activator GCN1; AltName: Fu... 254 e-128
AC004812_3(AC004812|pid:none) Homo sapiens PAC clone 267D11 from... 254 e-128
BC169100_1(BC169100|pid:none) Rattus norvegicus GCN1 general con... 254 e-128
BC168513_1(BC168513|pid:none) Danio rerio cDNA clone IMAGE:69620... 255 e-128
AK147257_1(AK147257|pid:none) Mus musculus cDNA, RIKEN full-leng... 254 e-128
AB093217_1(AB093217|pid:none) Mus musculus mRNA for mKIAA0219 pr... 254 e-128
BC056933_1(BC056933|pid:none) Mus musculus GCN1 general control ... 254 e-128
AL954693_2(AL954693|pid:none) Zebrafish DNA sequence from clone ... 238 e-123
BC135787_1(BC135787|pid:none) Xenopus tropicalis GCN1 general co... 258 e-123
AP008209_2460(AP008209|pid:none) Oryza sativa (japonica cultivar... 259 e-120
FN357337_21(FN357337|pid:none) Schistosoma mansoni genome sequen... 231 e-110
AC146936_30(AC146936|pid:none) Oryza sativa (japonica cultivar-g... 259 e-107
AC006193_10(AC006193|pid:none) Arabidopsis thaliana chromosome I... 254 e-106
CP000587_190(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 226 e-101
AM920428_489(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 212 4e-98
CP001323_484(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 227 5e-98
CP000500_677(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 225 9e-98
CU633454_76(CU633454|pid:none) Podospora anserina genomic DNA ch... 222 2e-97
(Q10105) RecName: Full=Translational activator gcn1; &CU329670_... 246 5e-96
AE017342_245(AE017342|pid:none) Cryptococcus neoformans var. neo... 253 5e-95
CU928169_265(CU928169|pid:none) Kluyveromyces thermotolerans str... 210 1e-87
AC024798_9(AC024798|pid:none) Caenorhabditis elegans cosmid Y48G... 214 2e-84
FM992689_981(FM992689|pid:none) Candida dubliniensis CD36 chromo... 202 3e-81
CU928179_807(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 212 4e-59
(P33892) RecName: Full=Translational activator GCN1; &A48126(A4... 214 2e-53
AF377946_1(AF377946|pid:none) Oryza sativa (japonica cultivar-gr... 175 8e-42
BC082548_1(BC082548|pid:none) Mus musculus GCN1 general control ... 112 3e-28
AM502236_82(AM502236|pid:none) Leishmania infantum chromosome 18. 122 8e-26
BC068244_1(BC068244|pid:none) Mus musculus GCN1 general control ... 70 4e-14
AL844509_52(AL844509|pid:none) Plasmodium falciparum 3D7 chromos... 61 6e-14
AK089324_1(AK089324|pid:none) Mus musculus B6-derived CD11 +ve d... 73 4e-11
CR954202_605(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 67 3e-09
CP001329_97(CP001329|pid:none) Micromonas sp. RCC299 chromosome ... 66 7e-09
CR954215_64(CR954215|pid:none) Ostreococcus tauri strain OTTH059... 62 1e-07
DVBYE3(S59395;A35027;S11174;A38376) translation elongation facto... 61 2e-07
(P16521) RecName: Full=Elongation factor 3A; Short=EF-3... 61 2e-07
(P29551) RecName: Full=Elongation factor 3; Short=EF-3;... 55 2e-07
AB012141_1(AB012141|pid:none) Candida glabrata TEF3 gene for tra... 59 2e-07
(O93796) RecName: Full=Elongation factor 3; Short=EF-3;... 59 2e-07
CU928180_499(CU928180|pid:none) Kluyveromyces thermotolerans str... 59 6e-07
(P53978) RecName: Full=Elongation factor 3B; Short=EF-3... 59 1e-06
(P25997) RecName: Full=Elongation factor 3; Short=EF-3;... 59 1e-06
CR382131_547(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 58 2e-06
(Q75EV6) RecName: Full=Elongation factor 3; Short=EF-3;... 57 2e-06
CP001334_34(CP001334|pid:none) Micromonas sp. RCC299 chromosome ... 57 3e-06
CP000500_129(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 57 3e-06
GN108010_1(GN108010|pid:none) Sequence 12791 from Patent WO20090... 56 5e-06
FM992692_78(FM992692|pid:none) Candida dubliniensis CD36 chromos... 56 5e-06
AM910996_38(AM910996|pid:none) Plasmodium knowlesi strain H chro... 56 7e-06
AY508700_1(AY508700|pid:none) Clavispora lusitaniae strain CBS 6... 56 7e-06
(O14134) RecName: Full=mRNA export factor elf1; &CU329670_856(C... 54 2e-05
CP000393_710(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 54 2e-05
AP007151_366(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 54 4e-05
EF101928_679(EF101928|pid:none) Acanthocystis turfacea Chlorella... 52 1e-04
AM920435_1256(AM920435|pid:none) Penicillium chrysogenum Wiscons... 52 1e-04
CR382121_395(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 50 3e-04
CU633448_147(CU633448|pid:none) Podospora anserina genomic DNA c... 50 4e-04
CR382133_121(CR382133|pid:none) Debaryomyces hansenii strain CBS... 49 0.001
AF035434_1(AF035434|pid:none) Aspergillus fumigatus elongation f... 48 0.001
GN108002_1(GN108002|pid:none) Sequence 12783 from Patent WO20090... 48 0.001
AF007748_1(AF007748|pid:none) Homo sapiens karyopherin beta2b ho... 48 0.002
CP000501_336(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 47 0.003
FN357406_11(FN357406|pid:none) Schistosoma mansoni genome sequen... 47 0.003
CP000497_483(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 47 0.003
AK154985_1(AK154985|pid:none) Mus musculus NOD-derived CD11c +ve... 47 0.004
AY849672_1(AY849672|pid:none) Magnaporthe grisea elongation fact... 47 0.004
CR382138_118(CR382138|pid:none) Debaryomyces hansenii strain CBS... 46 0.006
CR954214_206(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 46 0.006
AF038153_1(AF038153|pid:none) Candida albicans elongation-like f... 46 0.006
BC084978_1(BC084978|pid:none) Xenopus laevis hypothetical LOC495... 45 0.010
BC018314_1(BC018314|pid:none) Homo sapiens transportin 2, mRNA (... 45 0.012
BC072420_1(BC072420|pid:none) Homo sapiens transportin 2, mRNA (... 45 0.012
AB384365_1(AB384365|pid:none) Synthetic construct DNA, clone: pF... 45 0.012
DQ491001_742(DQ491001|pid:none) Paramecium bursaria chlorella vi... 45 0.012
CP000498_298(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 45 0.012
FM992688_747(FM992688|pid:none) Candida dubliniensis CD36 chromo... 45 0.016
AY811826_1(AY811826|pid:none) Schistosoma japonicum SJCHGC03272 ... 45 0.016
DQ890022_733(DQ890022|pid:none) Paramecium bursaria Chlorella vi... 45 0.016
BC078080_1(BC078080|pid:none) Xenopus laevis protein phosphatase... 45 0.016
S65953(S65953;I51631) [phosphorylase] phosphatase (EC 3.1.3.17) ... 45 0.016
AK299485_1(AK299485|pid:none) Homo sapiens cDNA FLJ54538 complet... 44 0.021
(Q9UT08) RecName: Full=Protein phosphatase PP2A regulatory subun... 44 0.021
CR860766_1(CR860766|pid:none) Pongo abelii mRNA; cDNA DKFZp459F2... 44 0.021
M65254_1(M65254|pid:none) Protein phosphatase 2A 65 kDa regulato... 44 0.021
AK029774_1(AK029774|pid:none) Mus musculus adult male testis cDN... 44 0.028
(Q86C65) RecName: Full=Target of rapamycin; EC=2.7.1.-;... 44 0.028
AK088776_1(AK088776|pid:none) Mus musculus 2 days neonate thymus... 44 0.028
AB168293_1(AB168293|pid:none) Macaca fascicularis testis cDNA cl... 44 0.028
AK290593_1(AK290593|pid:none) Homo sapiens cDNA FLJ77680 complet... 44 0.036
(Q6NUP7) RecName: Full=Serine/threonine-protein phosphatase 4 re... 44 0.036
CP001575_249(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 44 0.036
BX842680_21(BX842680|pid:none) Neurospora crassa DNA linkage gro... 44 0.036
AB046842_1(AB046842|pid:none) Homo sapiens mRNA for KIAA1622 pro... 44 0.036
BC080218_1(BC080218|pid:none) Danio rerio transportin 2 (importi... 43 0.047
(Q5R6J0) RecName: Full=Proteasome-associated protein ECM29 homol... 43 0.047
CR860499_1(CR860499|pid:none) Pongo abelii mRNA; cDNA DKFZp469F1... 43 0.047
AK091387_1(AK091387|pid:none) Homo sapiens cDNA FLJ34068 fis, cl... 43 0.047
AK293388_1(AK293388|pid:none) Homo sapiens cDNA FLJ54667 complet... 43 0.047
AK090488_1(AK090488|pid:none) Homo sapiens cDNA FLJ33169 fis, cl... 43 0.047
AY892682_1(AY892682|pid:none) Synthetic construct Homo sapiens c... 43 0.047
BT030492_1(BT030492|pid:none) Bos taurus protein phosphatase 2 (... 43 0.047
AK293174_1(AK293174|pid:none) Homo sapiens cDNA FLJ53296 complet... 43 0.047
(P30153) RecName: Full=Serine/threonine-protein phosphatase 2A 6... 43 0.047
AB170499_1(AB170499|pid:none) Macaca fascicularis brain cDNA clo... 43 0.047
AK293493_1(AK293493|pid:none) Homo sapiens cDNA FLJ56053 complet... 43 0.047
CR450340_1(CR450340|pid:none) Homo sapiens full open reading fra... 43 0.047
M31786_1(M31786|pid:none) Human medium tumor antigen-associated ... 43 0.047
PDBN(1B3U)A MOL_ID: 1;MOL_ID: 1; MOLECULE: PROTEIN PHOSPHATASE P... 43 0.047
AK292275_1(AK292275|pid:none) Homo sapiens cDNA FLJ76434 complet... 43 0.062
AF196287_1(AF196287|pid:none) Medicago sativa subsp. x varia Ser... 43 0.062
A34541(A34541;A36180;E38351) phosphoprotein phosphatase 2-alpha ... 43 0.062
AP007150_477(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 43 0.062
BC052678_1(BC052678|pid:none) Mus musculus protein phosphatase 2... 43 0.062
(P54612) RecName: Full=Serine/threonine-protein phosphatase 2A 6... 43 0.062
BC027596_1(BC027596|pid:none) Homo sapiens protein phosphatase 2... 43 0.062
AF374376_33(AF374376|pid:none) Oikopleura dioica clone BAC clone... 43 0.062
BC108103_1(BC108103|pid:none) Bos taurus protein phosphatase 2 (... 43 0.062
CR382135_476(CR382135|pid:none) Debaryomyces hansenii strain CBS... 43 0.062
(Q4QQT4) RecName: Full=Serine/threonine-protein phosphatase 2A 6... 43 0.062
CR858699_1(CR858699|pid:none) Pongo abelii mRNA; cDNA DKFZp459N1... 42 0.081
AK029953_1(AK029953|pid:none) Mus musculus adult male testis cDN... 42 0.081
AP007164_116(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 42 0.081
BC043624_1(BC043624|pid:none) Xenopus laevis phosphorylase phosp... 42 0.081
AP008218_185(AP008218|pid:none) Oryza sativa (japonica cultivar-... 42 0.11
FJ667540_1(FJ667540|pid:none) Betula pendula protein phosphatase... 42 0.11
S65952(S65952;S72499)[phosphorylase] phosphatase (EC 3.1.3.17) b... 42 0.11
U72395_1(U72395|pid:none) Homo sapiens MIP mRNA, complete cds. 42 0.14
BC172431_1(BC172431|pid:none) Synthetic construct Homo sapiens c... 42 0.14
U70322_1(U70322|pid:none) Human transportin (TRN) mRNA, complete... 42 0.14
(Q5VYK3) RecName: Full=Proteasome-associated protein ECM29 homol... 42 0.14
AB002366_1(AB002366|pid:none) Human mRNA for KIAA0368 gene, part... 42 0.14
(Q92973) RecName: Full=Transportin-1; AltName: Full=Importin bet... 42 0.14
AK301021_1(AK301021|pid:none) Homo sapiens cDNA FLJ58732 complet... 42 0.14
(Q6PDI5) RecName: Full=Proteasome-associated protein ECM29 homol... 42 0.14
AL159168_1(AL159168|pid:none) Human DNA sequence from clone RP11... 42 0.14
S51809(S51809) phosphoprotein phosphatase 2A 65K regulatory chai... 42 0.14
AM270402_10(AM270402|pid:none) Aspergillus niger contig An18c010... 42 0.14
AE017346_442(AE017346|pid:none) Cryptococcus neoformans var. neo... 42 0.14
AJ507317_1(AJ507317|pid:none) Solanum tuberosum subsp. andigena ... 42 0.14
(Q8BFY9) RecName: Full=Transportin-1; AltName: Full=Importin bet... 41 0.18
AK167049_1(AK167049|pid:none) Mus musculus blastocyst blastocyst... 41 0.18
BC031571_1(BC031571|pid:none) Mus musculus transportin 1, mRNA (... 41 0.18
AM920435_1352(AM920435|pid:none) Penicillium chrysogenum Wiscons... 41 0.18
(Q8C0Y0) RecName: Full=Serine/threonine-protein phosphatase 4 re... 41 0.18
(Q7TNP2) RecName: Full=Serine/threonine-protein phosphatase 2A 6... 41 0.18
AK161392_1(AK161392|pid:none) Mus musculus adult male testis cDN... 41 0.18
AK018414_1(AK018414|pid:none) Mus musculus 16 days embryo lung c... 41 0.18
A43767(A43767) phosphoprotein phosphatase (EC 3.1.3.16) 65K regu... 41 0.18
AJ131045_1(AJ131045|pid:none) Cicer arietinum mRNA for protein p... 41 0.18
BC113754_1(BC113754|pid:none) Mus musculus protein phosphatase 4... 41 0.18
BC111887_1(BC111887|pid:none) Mus musculus protein phosphatase 4... 41 0.18
AE016816_143(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 41 0.24
BC075576_1(BC075576|pid:none) Xenopus tropicalis platelet-derive... 41 0.24
CP001576_321(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 40 0.31
BC133190_1(BC133190|pid:none) Xenopus laevis hypothetical protei... 40 0.31
AE016816_483(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 40 0.31
AK094107_1(AK094107|pid:none) Homo sapiens cDNA FLJ36788 fis, cl... 40 0.31
AK155760_1(AK155760|pid:none) Mus musculus B6-derived CD11 +ve d... 40 0.40
BC103374_1(BC103374|pid:none) Bos taurus transportin 1, mRNA (cD... 40 0.40
BT072580_1(BT072580|pid:none) Salmo salar clone ssal-rgf-531-139... 40 0.40
U61987_1(U61987|pid:none) Dictyostelium discoideum phosphoprotei... 40 0.40
AF121334_1(AF121334|pid:none) Eufolliculina uhligi clone EuT1 TI... 40 0.40
AP007164_593(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 40 0.40
BC168566_1(BC168566|pid:none) Xenopus tropicalis cDNA clone MGC:... 40 0.52
EF193352_1(EF193352|pid:none) Macaca mulatta prominin-1 mRNA, co... 40 0.52
AL590447_14(AL590447|pid:none) chromosome VII of strain GB-M1 of... 40 0.52
AM270337_5(AM270337|pid:none) Aspergillus niger contig An15c0100... 40 0.53
AC011810_8(AC011810|pid:none) Arabidopsis thaliana chromosome I ... 40 0.53
(Q10178) RecName: Full=U2 snRNP component prp10; &CU329670_1789... 40 0.53
(Q8TEX9) RecName: Full=Importin-4; Short=Imp4; AltName:... 40 0.53
AK057277_1(AK057277|pid:none) Homo sapiens cDNA FLJ32715 fis, cl... 40 0.53
CU633456_2(CU633456|pid:none) Podospora anserina genomic DNA chr... 40 0.53
BC047240_1(BC047240|pid:none) Homo sapiens HEAT repeat containin... 40 0.53
(Q38951) RecName: Full=Serine/threonine-protein phosphatase 2A 6... 40 0.53
BC003690_1(BC003690|pid:none) Homo sapiens importin 4, mRNA (cDN... 40 0.53
AF411122_1(AF411122|pid:none) Homo sapiens importin 4 mRNA, comp... 40 0.53
CR457367_1(CR457367|pid:none) Homo sapiens full open reading fra... 40 0.53
AK094897_1(AK094897|pid:none) Homo sapiens cDNA FLJ37578 fis, cl... 40 0.53
(Q86Y56) RecName: Full=HEAT repeat-containing protein 2; 40 0.53
AK026991_1(AK026991|pid:none) Homo sapiens cDNA: FLJ23338 fis, c... 40 0.53
AK010326_1(AK010326|pid:none) Mus musculus ES cells cDNA, RIKEN ... 39 0.68
BC149532_1(BC149532|pid:none) Bos taurus MMS19 nucleotide excisi... 39 0.68
AF319949_1(AF319949|pid:none) Mus musculus MMS19 mRNA, complete ... 39 0.68
(Q9D071) RecName: Full=MMS19 nucleotide excision repair protein ... 39 0.68
L05146_8(L05146|pid:none) Saccharomyces cerevisiae chromosome I ... 39 0.69
M98389_1(M98389|pid:none) Yeast protein phosphatase regulatory s... 39 0.69
EU561359_1(EU561359|pid:none) Carassius auratus protein phosphat... 39 0.69
(P31383) RecName: Full=Protein phosphatase PP2A regulatory subun... 39 0.69
(Q96RK5) RecName: Full=MMS19 nucleotide excision repair protein ... 39 0.89
AF486851_1(AF486851|pid:none) Arabidopsis thaliana tubulin foldi... 39 0.89
BC080532_1(BC080532|pid:none) Homo sapiens MMS19 nucleotide exci... 39 0.89
BC084944_1(BC084944|pid:none) Xenopus laevis hypothetical LOC495... 39 0.89
BC006575_1(BC006575|pid:none) Homo sapiens MMS19 nucleotide exci... 39 0.89
AF319947_1(AF319947|pid:none) Homo sapiens MMS19 (MMS19) mRNA, c... 39 0.89
BC117129_1(BC117129|pid:none) Homo sapiens MMS19 nucleotide exci... 39 0.89
CR858892_1(CR858892|pid:none) Pongo abelii mRNA; cDNA DKFZp459N1... 39 0.89
AK304287_1(AK304287|pid:none) Homo sapiens cDNA FLJ54519 complet... 39 0.89
CP001147_2004(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 39 0.90
AC135206_1(AC135206|pid:none) Oryza sativa (japonica cultivar-gr... 39 0.90
CU928179_319(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 39 1.2
CR380951_153(CR380951|pid:none) Candida glabrata strain CBS138 c... 39 1.2
CR382123_697(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 39 1.2
S69215(S69215;S71203)phosphoprotein phosphatase (EC 3.1.3.16) 2A... 39 1.2
S51807(S51807;S76594)phosphoprotein phosphatase 2A 65K regulator... 39 1.2
BC134503_1(BC134503|pid:none) Bos taurus importin 4, mRNA (cDNA ... 39 1.2
BC046055_1(BC046055|pid:none) Danio rerio protein phosphatase 2 ... 39 1.2
CT005270_198(CT005270|pid:none) Leishmania major strain Friedlin... 39 1.2
AJ243828_1(AJ243828|pid:none) Oryza sativa mRNA for protein phos... 38 1.5
AY940682_1(AY940682|pid:none) Zea mays protein phosphatase 2A re... 38 1.5
BT055991_1(BT055991|pid:none) Zea mays full-length cDNA clone ZM... 38 1.5
CR940347_895(CR940347|pid:none) Theileria annulata strain Ankara... 38 1.5
BC152004_1(BC152004|pid:none) Danio rerio cDNA clone IMAGE:78951... 38 1.5
CP000591_41(CP000591|pid:none) Ostreococcus lucimarinus CCE9901 ... 38 2.0
(P36875) RecName: Full=Protein phosphatase PP2A regulatory subun... 38 2.0
CU633900_558(CU633900|pid:none) Podospora anserina genomic DNA c... 38 2.0
AF196286_1(AF196286|pid:none) Medicago sativa subsp. x varia Ser... 38 2.0
AE016816_19(AE016816|pid:none) Ashbya gossypii (= Eremothecium g... 38 2.0
BX901896_5(BX901896|pid:none) Zebrafish DNA sequence from clone ... 38 2.0
AC005167_13(AC005167|pid:none) Arabidopsis thaliana chromosome 2... 37 2.6
CR382123_183(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 37 3.4
BX088700_81(BX088700|pid:none) DNA centromeric region sequence f... 37 3.4
AM260522_1257(AM260522|pid:none) Helicobacter acinonychis str. S... 37 4.4
CR382138_1014(CR382138|pid:none) Debaryomyces hansenii strain CB... 37 4.4
BX530089_4(BX530089|pid:none) Zebrafish DNA sequence from clone ... 37 4.4
AC146681_19(AC146681|pid:none) Medicago truncatula clone mth2-77... 37 4.4
AM920433_216(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 37 4.4
FN392320_1272(FN392320|pid:none) Pichia pastoris GS115 chromosom... 37 4.4
BX255913_4(BX255913|pid:none) Zebrafish DNA sequence from clone ... 37 4.4
AK297564_1(AK297564|pid:none) Homo sapiens cDNA FLJ53136 complet... 36 5.8
CP000489_2502(CP000489|pid:none) Paracoccus denitrificans PD1222... 36 5.8
AY449689_1(AY449689|pid:none) Homo sapiens prominin 1 isoform s3... 36 5.8
AY449693_1(AY449693|pid:none) Homo sapiens prominin 1 isoform s7... 36 5.8
(O43490) RecName: Full=Prominin-1; AltName: Full=Prominin-like p... 36 5.8
AY449690_1(AY449690|pid:none) Homo sapiens prominin 1 isoform s4... 36 5.8
AK075411_1(AK075411|pid:none) Homo sapiens cDNA PSEC0102 fis, cl... 36 5.8
AY449691_1(AY449691|pid:none) Homo sapiens prominin 1 isoform s5... 36 5.8
AP004708_5(AP004708|pid:none) Oryza sativa Japonica Group genomi... 36 5.8
CP000593_267(CP000593|pid:none) Ostreococcus lucimarinus CCE9901... 36 5.8
T03684(T03684) phosphoprotein phosphatase (EC 3.1.3.16) 2A regul... 36 5.8
BC097118_1(BC097118|pid:none) Danio rerio zgc:92493, mRNA (cDNA ... 36 5.8
CU928169_543(CU928169|pid:none) Kluyveromyces thermotolerans str... 36 5.8
AP008214_1491(AP008214|pid:none) Oryza sativa (japonica cultivar... 36 5.8
BC081658_1(BC081658|pid:none) Danio rerio zgc:92493, mRNA (cDNA ... 36 5.8
CR382132_72(CR382132|pid:none) Yarrowia lipolytica strain CLIB12... 36 7.6
(Q7V0R5) RecName: Full=Polyribonucleotide nucleotidyltransferase... 36 7.6
CR382132_1273(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 36 7.6
AK057044_1(AK057044|pid:none) Homo sapiens cDNA FLJ32482 fis, cl... 36 7.6
AF145645_1(AF145645|pid:none) Drosophila melanogaster clone GH07... 35 9.9
CP000143_1416(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 35 9.9
BC047184_1(BC047184|pid:none) Danio rerio cullin-associated and ... 35 9.9
BC071146_1(BC071146|pid:none) Xenopus laevis MGC83065 protein, m... 35 9.9
AK031952_1(AK031952|pid:none) Mus musculus adult male medulla ob... 35 9.9
AF495337_1(AF495337|pid:none) Arabidopsis thaliana ecotype Ba-1 ... 35 9.9
CP000661_1500(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 35 9.9
AF495366_1(AF495366|pid:none) Arabidopsis thaliana ecotype Nie-0... 35 9.9
(Q80W92) RecName: Full=Protein VAC14 homolog; &AY220476_1(AY220... 35 9.9
AK043319_1(AK043319|pid:none) Mus musculus 7 days neonate cerebe... 35 9.9
AE014134_1928(AE014134|pid:none) Drosophila melanogaster chromos... 35 9.9
AB020636_1(AB020636|pid:none) Homo sapiens mRNA for KIAA0829 pro... 35 9.9
BT023510_1(BT023510|pid:none) Drosophila melanogaster LD09533 fu... 35 9.9
AY072415_1(AY072415|pid:none) Arabidopsis thaliana unknown prote... 35 9.9
AK292456_1(AK292456|pid:none) Homo sapiens cDNA FLJ77762 complet... 35 9.9
AK046826_1(AK046826|pid:none) Mus musculus 10 days neonate medul... 35 9.9
(A0Q2P9) RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotran... 35 9.9
(A7MBJ5) RecName: Full=Cullin-associated NEDD8-dissociated prote... 35 9.9
(Q68WN1) RecName: Full=Polyribonucleotide nucleotidyltransferase... 35 9.9
(Q86KD1) RecName: Full=Cullin-associated NEDD8-dissociated prote... 35 9.9
CU928171_741(CU928171|pid:none) Kluyveromyces thermotolerans str... 35 9.9
CP001227_40(CP001227|pid:none) Rickettsia peacockii str. Rustic,... 35 9.9
AM920436_2338(AM920436|pid:none) Penicillium chrysogenum Wiscons... 35 9.9
AK230070_1(AK230070|pid:none) Arabidopsis thaliana mRNA for hypo... 35 9.9
>(Q54WR2) RecName: Full=Translational activator gcn1; AltName:
Full=GCN1-like protein 1;
Length = 2667
Score = 498 bits (1283), Expect(3) = 0.0
Identities = 257/272 (94%), Positives = 261/272 (95%), Gaps = 5/272 (1%)
Frame = +1
Query: 88 PMMIQKFIQ-----KNYXENLLSTNYVHTIDPASLSLLLPILERTLKERSSELKKMSCQI 252
P+++Q + K ENLLSTNYVHTIDPASLSLLLPILERTLKERSSELKKMSCQI
Sbjct: 1578 PLLLQTYDDPEIHSKELLENLLSTNYVHTIDPASLSLLLPILERTLKERSSELKKMSCQI 1637
Query: 253 VGNLCSLTEPKDLVPYLNILMPVMKTVLLDPIPEVRAICARALGLLVRGMGEENFSTLIP 432
VGNLCSLTEPKDLVPYLNILMPVMKTVLLDPIPEVRAICARALGLLVRGMGEENFSTLIP
Sbjct: 1638 VGNLCSLTEPKDLVPYLNILMPVMKTVLLDPIPEVRAICARALGLLVRGMGEENFSTLIP 1697
Query: 433 WLLETVKSDQGAVERSGAAQGLSEVLASLDISRFNSLINELLAMTNSPRPHVREGILSIF 612
WLLETVKSDQGAVERSGAAQGLSEVLASLDISRFNSLINELLAMTNSPRPHVREGILSIF
Sbjct: 1698 WLLETVKSDQGAVERSGAAQGLSEVLASLDISRFNSLINELLAMTNSPRPHVREGILSIF 1757
Query: 613 IFTPISLGDLFLPYLPKVLPQVLKGLADDSDPVREVCMRCGQSIVLQFAVTGIEVIVPAL 792
IFTPISLGDLFLPYLPKVLPQVLKGLADDSDPVREVCMRCGQSIVLQFAVTGIEVIVPAL
Sbjct: 1758 IFTPISLGDLFLPYLPKVLPQVLKGLADDSDPVREVCMRCGQSIVLQFAVTGIEVIVPAL 1817
Query: 793 EKVLFHENWRIRLSCVQLFGDLLFKLAGTTAQ 888
EKVLFHENWRIRLSCVQLFGDLLFKLAGTTAQ
Sbjct: 1818 EKVLFHENWRIRLSCVQLFGDLLFKLAGTTAQ 1849
Score = 341 bits (875), Expect(3) = 0.0
Identities = 177/182 (97%), Positives = 180/182 (98%)
Frame = +2
Query: 887 KQVQSNNSSYNAKDDDDDEPGSSGNDIQKILGKERLGRILSSLYMMRFDNNSSVRQKVLL 1066
++VQSNNSSYNAKDDDDDEPGSSGNDIQKILGKERLGRILSSLYMMRFDNNSSVRQKVLL
Sbjct: 1849 QEVQSNNSSYNAKDDDDDEPGSSGNDIQKILGKERLGRILSSLYMMRFDNNSSVRQKVLL 1908
Query: 1067 IWKYIVSNTPKTLREILPTLIEMIISSIGSNNVEKRQISAKTLGDIVSKLSDRILPEILP 1246
IWKYIVSNTPKTLREILPTLIEMIISSIGSNNVEKRQISAKTLGDIVSKLSDRILPEILP
Sbjct: 1909 IWKYIVSNTPKTLREILPTLIEMIISSIGSNNVEKRQISAKTLGDIVSKLSDRILPEILP 1968
Query: 1247 ILERGLRSELEETRQGVCIGLSEVISSAKTQLLPYLSSVVTCITKALCDPLIDVREAAR* 1426
ILERGLRSELEETRQGVCIGLSEVISSAKTQLLPYLSSVVTCITKALCDPLIDVREAA
Sbjct: 1969 ILERGLRSELEETRQGVCIGLSEVISSAKTQLLPYLSSVVTCITKALCDPLIDVREAAAK 2028
Query: 1427 SF 1432
+F
Sbjct: 2029 AF 2030
Score = 173 bits (439), Expect(3) = 0.0
Identities = 90/91 (98%), Positives = 90/91 (98%)
Frame = +3
Query: 1422 AKAFDHLYHTFGSKASNEILPQLIQLLDNSNNKDLAGYALGGLRQVILVRSSIVLPVLIP 1601
AKAFDHLYHTFGSKASNEILPQLIQLLDNSNNKDLAGYAL GLRQVILVRSSIVLPVLIP
Sbjct: 2027 AKAFDHLYHTFGSKASNEILPQLIQLLDNSNNKDLAGYALDGLRQVILVRSSIVLPVLIP 2086
Query: 1602 KLLSRPISTSNVTALSSLAADAGEGLYVHLS 1694
KLLSRPISTSNVTALSSLAADAGEGLYVHLS
Sbjct: 2087 KLLSRPISTSNVTALSSLAADAGEGLYVHLS 2117
Score = 449 bits (1156), Expect = e-124
Identities = 235/240 (97%), Positives = 237/240 (98%)
Frame = +1
Query: 1708 KRNQKGEQATLDKAIATIVDFLYQPSDDLRSMVAQTIGASSKCFTSLTELNQFIKTNLIS 1887
++ K EQATLDKAIATIVDFLYQPSDDLRSMVAQTIGASSKCFTSLTELNQFIKTNLIS
Sbjct: 2417 EKKPKVEQATLDKAIATIVDFLYQPSDDLRSMVAQTIGASSKCFTSLTELNQFIKTNLIS 2476
Query: 1888 PSQSVLSRYGKSLALGEIFKASGKNLIDSQSPNMPTIIKIIQTDCRDEKGPIRESSAYLA 2067
PSQSVLSRYGKSLALGEIFKASGKNLIDSQSPNMPTIIKIIQTDCRDEKGPIRESSAYLA
Sbjct: 2477 PSQSVLSRYGKSLALGEIFKASGKNLIDSQSPNMPTIIKIIQTDCRDEKGPIRESSAYLA 2536
Query: 2068 EAILVASPLTYAKDLVPSICHLIGDQSSSVSISALNVIKRFCKSNQQLSRQYLRDIVVPT 2247
EAILVASPLTYAKDLVPSICHLIGDQSSSVSISALNVIKRFCKSNQQLSRQYLRDIVVPT
Sbjct: 2537 EAILVASPLTYAKDLVPSICHLIGDQSSSVSISALNVIKRFCKSNQQLSRQYLRDIVVPT 2596
Query: 2248 MNRLKERTNLPLKLAAERTLVHSLQIFKESIVMDDLIKQLELSGDSSMANSLIDYHKRVL 2427
MNRLKERTNLPLKLAAERTLVHSLQIFKESIVMDDLIKQLELSGDSSMANSLIDYHKRVL
Sbjct: 2597 MNRLKERTNLPLKLAAERTLVHSLQIFKESIVMDDLIKQLELSGDSSMANSLIDYHKRVL 2656
Score = 84.3 bits (207), Expect = 2e-14
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 EAAKEALSHIGSVIRNPEIQIHVPLLLQTYDDPEIHSKELL 125
EAAKEALSHIGSVIRNPEIQIHVPLLLQTYDDPEIHSKELL
Sbjct: 1555 EAAKEALSHIGSVIRNPEIQIHVPLLLQTYDDPEIHSKELL 1595
Score = 74.3 bits (181), Expect = 2e-11
Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 4/194 (2%)
Frame = +1
Query: 295 PYLNILMPVMKTVLLDPIPEVRAICARALGLLVRGMGEENFSTLIPWLLETVKSDQGA-V 471
P ++I++ + L P V+ ++ + L+ ++ LIP LLE +K+ G
Sbjct: 1333 PKVSIVIDKLVDALSIPSESVQVGISKCIAQLIPSFKKQG-DRLIPMLLEKLKNSSGNYA 1391
Query: 472 ERSGAAQGLSEVLASLDISRFN--SLINELLA-MTNSPRPHVREGILSIFIFTPISLGDL 642
+R GAA GL+ + L I S+++ L + + + P R+G L F ++G +
Sbjct: 1392 DRRGAAFGLAGSVKGLGIGSLKNYSILDTLQSYIEDKKHPTSRQGALFAFECLCNTIGRV 1451
Query: 643 FLPYLPKVLPQVLKGLADDSDPVREVCMRCGQSIVLQFAVTGIEVIVPALEKVLFHENWR 822
F PY+ +LP++L D+ VR+ ++I+ Q + G+++++PAL K L +WR
Sbjct: 1452 FEPYIIHILPKLLVCFGDNVSEVRDATADTAKAIMSQLSGHGVKIVLPALLKALDDRSWR 1511
Query: 823 IRLSCVQLFGDLLF 864
+ ++L G + F
Sbjct: 1512 TKEGSIELLGAMAF 1525
Score = 48.9 bits (115), Expect = 9e-04
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 5/229 (2%)
Frame = +1
Query: 184 LLPILERTLKERSSELKKMSCQIVGNLCSLTEPKDLVPYLNILMPVMKTVLLDPIPEVRA 363
+LPILER L+ E ++ C + + S + + L+PYL+ ++ + L DP+ +VR
Sbjct: 1966 ILPILERGLRSELEETRQGVCIGLSEVISSAKTQ-LLPYLSSVVTCITKALCDPLIDVRE 2024
Query: 364 ICARALGLLVRGMGEENFSTLIPWLLETVKSDQGAVERSGAAQGLSEVLASLDISRFNSL 543
A+A L G + + ++P L++ + + A GL +V+ L
Sbjct: 2025 AAAKAFDHLYHTFGSKASNEILPQLIQLLDNSNNKDLAGYALDGLRQVILVRSSIVLPVL 2084
Query: 544 INELLAMTNSPRPHVREGILSIFIFTPISLGDLFLPYLPKVLPQVLKGLAD-----DSDP 708
I +LL+ RP + ++ G+ +L ++P +++ + ++
Sbjct: 2085 IPKLLS-----RPISTSNVTALSSLA-ADAGEGLYVHLSTIIPSLIESFTNPNTISNAKE 2138
Query: 709 VREVCMRCGQSIVLQFAVTGIEVIVPALEKVLFHENWRIRLSCVQLFGD 855
++E + +SI Q T I +++ E L + IRL +L G+
Sbjct: 2139 IKEAAVSICKSIDEQGWDTLIGLLIEQTEIRLPN----IRLGACELIGE 2183
Score = 43.1 bits (100), Expect = 0.047
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 1/182 (0%)
Frame = +2
Query: 881 PLKQVQSNNSSYNAKDDDDDEPGSSGNDIQKILGKERLGRILSSLYMMRFDN-NSSVRQK 1057
P+ + NSS N D G +G+ +G + IL +L D + + RQ
Sbjct: 1377 PMLLEKLKNSSGNYADRRGAAFGLAGSVKGLGIGSLKNYSILDTLQSYIEDKKHPTSRQG 1436
Query: 1058 VLLIWKYIVSNTPKTLREILPTLIEMIISSIGSNNVEKRQISAKTLGDIVSKLSDRILPE 1237
L ++ + + + + ++ ++ G N E R +A T I+S+LS +
Sbjct: 1437 ALFAFECLCNTIGRVFEPYIIHILPKLLVCFGDNVSEVRDATADTAKAIMSQLSGHGVKI 1496
Query: 1238 ILPILERGLRSELEETRQGVCIGLSEVISSAKTQLLPYLSSVVTCITKALCDPLIDVREA 1417
+LP L + L T++G L + A QL L ++V +T L D V+EA
Sbjct: 1497 VLPALLKALDDRSWRTKEGSIELLGAMAFCAPKQLSSCLPTIVPKLTYVLNDTHTKVQEA 1556
Query: 1418 AR 1423
A+
Sbjct: 1557 AK 1558
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,630,748,899
Number of extensions: 68525633
Number of successful extensions: 190483
Number of sequences better than 10.0: 274
Number of HSP's gapped: 189692
Number of HSP's successfully gapped: 525
Length of query: 813
Length of database: 1,051,180,864
Length adjustment: 137
Effective length of query: 676
Effective length of database: 607,772,281
Effective search space: 410854061956
Effective search space used: 410854061956
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home