Homology Contig-U12060-1 vs Protein
Query= Contig-U12060-1 (Contig-U12060-1Q) /CSM_Contig/Contig-U12060-1Q.Seq.d
(1537 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
T30330(T30330) gelsolin-related protein GRP125 - slime mold (Dic... 273 9e-72
CR628337_2769(CR628337|pid:none) Legionella pneumophila str. Len... 41 0.13
CP000828_3589(CP000828|pid:none) Acaryochloris marina MBIC11017,... 40 0.30
AB007644_3(AB007644|pid:none) Arabidopsis thaliana genomic DNA, ... 39 0.51
AK175266_1(AK175266|pid:none) Arabidopsis thaliana mRNA for pred... 39 0.51
T34513(T34513)hypothetical protein ZK783.1 - Caenorhabditis eleg... 39 0.51
AY723793_1(AY723793|pid:none) Saccharomyces cerevisiae clone FLH... 39 0.67
(P52890) RecName: Full=Transcription factor atf1; AltName: Full=... 38 0.87
AB113568_6(AB113568|pid:none) Actinoplanes sp. A40644 mevalonate... 38 0.87
AL844502_79(AL844502|pid:none) Plasmodium falciparum 3D7 chromos... 37 1.5
(Q92545) RecName: Full=Transmembrane protein 131; AltName: Full=... 37 1.9
D87446_1(D87446|pid:none) Human mRNA for KIAA0257 gene, partial ... 37 1.9
CP000878_1617(CP000878|pid:none) Prochlorococcus marinus str. MI... 37 1.9
(Q54L72) RecName: Full=GATA zinc finger domain-containing protei... 37 1.9
AC115604_14(AC115604|pid:none) Dictyostelium discoideum chromoso... 37 2.5
(Q54Y90) RecName: Full=Probable serine/threonine-protein kinase ... 37 2.5
(Q75JZ0) RecName: Full=GATA zinc finger domain-containing protei... 36 3.3
CR382134_273(CR382134|pid:none) Debaryomyces hansenii strain CBS... 36 3.3
(Q5TJ57) RecName: Full=Formin-E; AltName: Full=Diaphanous-relate... 36 3.3
BC129432_1(BC129432|pid:none) Danio rerio similar to Scc2-2A, mR... 36 4.3
AJ544237_1(AJ544237|pid:none) Arabidopsis thaliana mRNA for phyt... 36 4.3
U46857_1(U46857|pid:none) Anolis pulchellus vitellogenin mRNA, p... 36 4.3
(Q54HX6) RecName: Full=Myb-like protein I; 35 5.7
FM992695_89(FM992695|pid:none) Candida dubliniensis CD36 chromos... 35 5.7
AM884176_255(AM884176|pid:none) Chlamydia trachomatis strain L2/... 35 5.7
AL844506_168(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 35 5.7
AL844507_90(AL844507|pid:none) Plasmodium falciparum 3D7 chromos... 35 5.7
AE017344_376(AE017344|pid:none) Cryptococcus neoformans var. neo... 35 5.7
AC116305_33(AC116305|pid:none) Dictyostelium discoideum chromoso... 35 7.4
EF678118_1(EF678118|pid:none) Picea sitchensis clone WS02822_P07... 35 7.4
CP000568_2035(CP000568|pid:none) Clostridium thermocellum ATCC 2... 35 7.4
AC115598_3(AC115598|pid:none) Dictyostelium discoideum chromosom... 35 7.4
FM992688_257(FM992688|pid:none) Candida dubliniensis CD36 chromo... 35 7.4
CP000685_2667(CP000685|pid:none) Flavobacterium johnsoniae UW101... 35 7.4
(Q54W36) RecName: Full=Hybrid signal transduction histidine kina... 35 7.4
AC115680_2(AC115680|pid:none) Dictyostelium discoideum chromosom... 35 7.4
AF361947_1(AF361947|pid:none) Dictyostelium discoideum SgcA (sgc... 35 9.7
(P59111) RecName: Full=Potassium voltage-gated channel subfamily... 35 9.7
AC116986_28(AC116986|pid:none) Dictyostelium discoideum chromoso... 35 9.7
AC116924_16(AC116924|pid:none) Dictyostelium discoideum chromoso... 35 9.7
AC117076_58(AC117076|pid:none) Dictyostelium discoideum chromoso... 35 9.7
AK048629_1(AK048629|pid:none) Mus musculus 16 days embryo head c... 35 9.7
AY811182_1(AY811182|pid:none) Schistosoma japonicum SJCHGC01027 ... 35 9.7
BC029690_1(BC029690|pid:none) Mus musculus potassium voltage-gat... 35 9.7
AC116305_50(AC116305|pid:none) Dictyostelium discoideum chromoso... 35 9.7
CR380955_87(CR380955|pid:none) Candida glabrata strain CBS138 ch... 35 9.7
>T30330(T30330) gelsolin-related protein GRP125 - slime mold
(Dictyostelium discoideum) &U95159_1(U95159|pid:none)
Length = 1087
Score = 273 bits (699), Expect = 9e-72
Identities = 135/135 (100%), Positives = 135/135 (100%)
Frame = +1
Query: 487 GIIVSPPSEKVDEANSSSTISSPENEGSVSVKDKRKSNEPITPSVVSSSGDLLFAYEPYH 666
GIIVSPPSEKVDEANSSSTISSPENEGSVSVKDKRKSNEPITPSVVSSSGDLLFAYEPYH
Sbjct: 912 GIIVSPPSEKVDEANSSSTISSPENEGSVSVKDKRKSNEPITPSVVSSSGDLLFAYEPYH 971
Query: 667 GPPIHSSNSPKQGRKGGRKSHGKNQPQHKKNHSVDQSPLSSPIIPNKSLNLDIDNQSFDL 846
GPPIHSSNSPKQGRKGGRKSHGKNQPQHKKNHSVDQSPLSSPIIPNKSLNLDIDNQSFDL
Sbjct: 972 GPPIHSSNSPKQGRKGGRKSHGKNQPQHKKNHSVDQSPLSSPIIPNKSLNLDIDNQSFDL 1031
Query: 847 NSINNNNSVEVLDGA 891
NSINNNNSVEVLDGA
Sbjct: 1032 NSINNNNSVEVLDGA 1046
Score = 109 bits (273), Expect = 2e-22
Identities = 56/87 (64%), Positives = 56/87 (64%)
Frame = +1
Query: 1 FXFLPPEYEAGVXEFDQGKESDNFWKIIGGNSNDIVINTFINENXXXXXXXXXXXXXXXX 180
F FLPPEYEAGV EFDQGKESDNFWKIIGGNSNDIVINTFINEN
Sbjct: 514 FTFLPPEYEAGVKEFDQGKESDNFWKIIGGNSNDIVINTFINENKEEKEKEEEEKEEEEE 573
Query: 181 XXXXXXXXXXXXXDNNKTTTIIKHLRP 261
DNNKTTTIIKHLRP
Sbjct: 574 EEEEEEEEEEEEKDNNKTTTIIKHLRP 600
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,126,592,590
Number of extensions: 20785796
Number of successful extensions: 65154
Number of sequences better than 10.0: 46
Number of HSP's gapped: 63720
Number of HSP's successfully gapped: 48
Length of query: 512
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 379
Effective length of database: 620,718,517
Effective search space: 235252317943
Effective search space used: 235252317943
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home