Homology Contig-U11979-1 vs Protein
Query= Contig-U11979-1 (Contig-U11979-1Q) /CSM_Contig/Contig-U11979-1Q.Seq.d
(1655 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(O15818) RecName: Full=Protein KIAA0664 homolog; 778 0.0
AL607024_2(AL607024|pid:none) Mouse DNA sequence from clone RP23... 261 5e-68
AK154146_1(AK154146|pid:none) Mus musculus NOD-derived CD11c +ve... 261 5e-68
AK154925_1(AK154925|pid:none) Mus musculus NOD-derived CD11c +ve... 261 5e-68
AK157310_1(AK157310|pid:none) Mus musculus activated spleen cDNA... 261 5e-68
CR627449_1(CR627449|pid:none) Homo sapiens mRNA; cDNA DKFZp686L0... 261 5e-68
AB093256_1(AB093256|pid:none) Mus musculus premature mRNA for mK... 261 5e-68
(Q8CHD9) RecName: Full=Protein KIAA0664; 261 5e-68
AK036540_1(AK036540|pid:none) Mus musculus adult male bone cDNA,... 261 5e-68
AK125717_1(AK125717|pid:none) Homo sapiens cDNA FLJ43729 fis, cl... 261 7e-68
(A0JMD0) RecName: Full=Protein KIAA0664 homolog; &BC125829_1(BC... 261 7e-68
BC072573_1(BC072573|pid:none) Mus musculus RIKEN cDNA 1300001I01... 260 1e-67
(Q17N71) RecName: Full=Protein KIAA0664 homolog; 251 4e-65
(A1ZAB5) RecName: Full=Protein KIAA0664 homolog; &AE013599_2332... 250 1e-64
(Q291J5) RecName: Full=Protein KIAA0664 homolog; 249 2e-64
BT011344_1(BT011344|pid:none) Drosophila melanogaster RH51925 fu... 244 9e-63
BC060069_1(BC060069|pid:none) Mus musculus RIKEN cDNA 1300001I01... 241 7e-62
(A8PJX4) RecName: Full=Protein KIAA0664 homolog; 230 1e-58
(A4R962) RecName: Full=Protein TIF31 homolog; 213 2e-53
AF101078_1(AF101078|pid:none) Caenorhabditis elegans CLU-1 (clu-... 211 8e-53
(A8XAA9) RecName: Full=Protein KIAA0664 homolog; 209 3e-52
(A6SFG0) RecName: Full=Protein TIF31 homolog; 204 8e-51
(A7ENU3) RecName: Full=Protein TIF31 homolog; 202 4e-50
(Q2UKX8) RecName: Full=Protein TIF31 homolog; &AP007155_547(AP0... 201 5e-50
(A1CKI4) RecName: Full=Protein TIF31 homolog; 200 1e-49
(A2QDB9) RecName: Full=Protein TIF31 homolog; &AM270014_23(AM27... 200 1e-49
CU633900_426(CU633900|pid:none) Podospora anserina genomic DNA c... 198 4e-49
(B0XXS1) RecName: Full=Protein TIF31 homolog; &(Q4WXV2) RecName... 197 9e-49
(A1D6Y7) RecName: Full=Protein TIF31 homolog; 196 2e-48
BC063786_1(BC063786|pid:none) Homo sapiens KIAA0664, mRNA (cDNA ... 196 2e-48
FN357539_16(FN357539|pid:none) Schistosoma mansoni genome sequen... 192 2e-47
(Q4PA50) RecName: Full=Protein TIF31 homolog; 191 5e-47
(A6R8I2) RecName: Full=Protein TIF31 homolog; 191 9e-47
(O59742) RecName: Full=Protein TIF31 homolog; &AL023634_6(AL023... 187 1e-45
T40522(T40522)hypothetical protein SPBC530.06c - fission yeast ... 187 1e-45
(Q1E101) RecName: Full=Protein TIF31 homolog; 187 1e-45
FM992688_465(FM992688|pid:none) Candida dubliniensis CD36 chromo... 185 5e-45
(Q59MA9) RecName: Full=Protein TIF31 homolog; 183 2e-44
CR382133_133(CR382133|pid:none) Debaryomyces hansenii strain CBS... 179 3e-43
CR548612_176(CR548612|pid:none) Paramecium tetraurelia macronucl... 172 4e-41
(Q5K7G8) RecName: Full=Protein TIF31 homolog; &AE017353_251(AE0... 167 8e-40
CR382128_754(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 167 1e-39
(A5DWP3) RecName: Full=Protein TIF31 homolog; 164 7e-39
(A3GG12) RecName: Full=Protein TIF31 homolog; 164 7e-39
(Q03690) RecName: Full=Protein TIF31; &AF004911_1(AF004911|pid:... 151 8e-35
CU928168_318(CU928168|pid:none) Kluyveromyces thermotolerans str... 141 6e-32
CU469504_2(CU469504|pid:none) Zebrafish DNA sequence from clone ... 140 2e-31
(Q6CIN0) RecName: Full=Protein TIF31 homolog; &CR382126_1081(CR... 134 1e-29
BC094446_1(BC094446|pid:none) Mus musculus RIKEN cDNA 1300001I01... 113 2e-23
AY811542_1(AY811542|pid:none) Schistosoma japonicum SJCHGC03359 ... 99 3e-19
S40989(S40989)hypothetical protein F55H2.6 - Caenorhabditis eleg... 92 6e-17
AP004801_3(AP004801|pid:none) Oryza sativa Japonica Group genomi... 63 4e-08
AP008208_887(AP008208|pid:none) Oryza sativa (japonica cultivar-... 63 4e-08
AC135414_11(AC135414|pid:none) Medicago truncatula clone mth2-8n... 54 2e-05
FN370080_2(FN370080|pid:none) Schistosoma mansoni genome sequenc... 54 2e-05
AP008210_2076(AP008210|pid:none) Oryza sativa (japonica cultivar... 50 3e-04
AL606445_2(AL606445|pid:none) Oryza sativa genomic DNA, chromoso... 50 3e-04
AM463986_3(AM463986|pid:none) Vitis vinifera contig VV78X059004.... 49 7e-04
AC116979_61(AC116979|pid:none) Dictyostelium discoideum chromoso... 48 0.001
AC007591_23(AC007591|pid:none) Arabidopsis thaliana chromosome 1... 46 0.005
AP005248_1(AP005248|pid:none) Oryza sativa Japonica Group genomi... 44 0.013
AC116963_55(AC116963|pid:none) Dictyostelium discoideum chromoso... 44 0.023
AC159448_24(AC159448|pid:none) Trypanosoma brucei chromosome 8 c... 42 0.051
AM476643_1(AM476643|pid:none) Vitis vinifera contig VV78X063926.... 40 0.19
FN369878_1(FN369878|pid:none) Schistosoma mansoni genome sequenc... 39 0.56
CP000376_513(CP000376|pid:none) Silicibacter sp. TM1040 mega pla... 36 3.6
FN357342_28(FN357342|pid:none) Schistosoma mansoni genome sequen... 36 3.6
AC116977_59(AC116977|pid:none) Dictyostelium discoideum chromoso... 35 6.2
U70376_21(U70376|pid:none) Streptomyces flavopersicus spectinomy... 35 6.2
CP001083_1399(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 35 6.2
AM502234_175(AM502234|pid:none) Leishmania infantum chromosome 16. 35 8.1
>(O15818) RecName: Full=Protein KIAA0664 homolog;
Length = 1320
Score = 778 bits (2009), Expect = 0.0
Identities = 402/470 (85%), Positives = 406/470 (86%), Gaps = 1/470 (0%)
Frame = +1
Query: 247 IPEYSELSSIEGLVEGATLEMVPVDYNERSAKLHVKRLRDIMNTGLTEFANMNNPSLFTS 426
IPEYSELSSIEGLVEGATLEMVPVDYNERSAKLHVKRLRDIMNTGLTEFANMNNPSLFTS
Sbjct: 93 IPEYSELSSIEGLVEGATLEMVPVDYNERSAKLHVKRLRDIMNTGLTEFANMNNPSLFTS 152
Query: 427 FSFPEKSNILTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIATEQQQXXXXXXXXXXXX 606
FSFPEKSNILT TIATEQQQ
Sbjct: 153 FSFPEKSNILTEEQQLEEQKQKFEQQQQQQQQTEDKEEKETIATEQQQNKKNKHHNKKGN 212
Query: 607 XXXXXXXXXXXXXXXXKLTPQQKERKQKMTEIKGIDKPMLSSYYPESPIAPVQCVKSMIY 786
KLTPQQKERKQKMTEIKGIDKPMLSSYYPESPIAPVQCVKSMIY
Sbjct: 213 KKNNGDESLNNENNEEKLTPQQKERKQKMTEIKGIDKPMLSSYYPESPIAPVQCVKSMIY 272
Query: 787 SGWSPVPGYRKLFGDLFYLDITLLEGTTICVTASTQGFFINQSSNATFNPSVSPKATINH 966
SGWSPVPGYRKLFGDLFYLDITLLEGTTICVTASTQGFFINQSSNATFNPSVSPKATINH
Sbjct: 273 SGWSPVPGYRKLFGDLFYLDITLLEGTTICVTASTQGFFINQSSNATFNPSVSPKATINH 332
Query: 967 SLHQLLTQVSRLFRRGLNQILTNIGRNHPFDMLPGVLPVHNWVASSKTNRYDINKGTDTF 1146
SLHQLLTQVSRLFRRGLNQILTNIGRNHPFDMLPGVLPVHNWVASSKTNRYDINKGTDTF
Sbjct: 333 SLHQLLTQVSRLFRRGLNQILTNIGRNHPFDMLPGVLPVHNWVASSKTNRYDINKGTDTF 392
Query: 1147 VSVQDVELRGNPRDWNEEIQAPKELPKSTVQERIIRDRAISKVNSEFVECAIRGAQVIVD 1326
VSVQDVELRGNPRDWNEEIQAPKELPKSTVQERIIRDRAISKVNSEFVECAIRGAQVIVD
Sbjct: 393 VSVQDVELRGNPRDWNEEIQAPKELPKSTVQERIIRDRAISKVNSEFVECAIRGAQVIVD 452
Query: 1327 KAILPINPAENQRSHMFLYNNIFFSYALDTRDSFTDCGGDDAARTSANNDLKGIRLYNLA 1506
KAILPINPAENQRSHMFLYNNIFFSYALDTRDSFTDCGGDDAARTSANNDLKGIRLYNLA
Sbjct: 453 KAILPINPAENQRSHMFLYNNIFFSYALDTRDSFTDCGGDDAARTSANNDLKGIRLYNLA 512
Query: 1507 DIDGLYTLGTAIVDYKGQRIIAQSLIPGILTTKKLQK-FIRFKDTPTNKK 1653
DIDGLYTLGTAIVDYKGQRIIAQSLIPGILTT+K K + DTPTN++
Sbjct: 513 DIDGLYTLGTAIVDYKGQRIIAQSLIPGILTTEKTSKIYYGSMDTPTNEE 562
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,096,387,119
Number of extensions: 43492139
Number of successful extensions: 96580
Number of sequences better than 10.0: 71
Number of HSP's gapped: 96475
Number of HSP's successfully gapped: 95
Length of query: 551
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 417
Effective length of database: 617,481,958
Effective search space: 257489976486
Effective search space used: 257489976486
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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