Dictyostelium discoideum cDNA Contig-U11979-1

Assembled

Chromosomal Location of Contig-U11979-1

Sequence Contig-U11979-1

AGCGTTTATT TAAATATATT TATTTAAATT CATTTATTTA TTTATTTTTT
TTTTAAAAAA AAAGTTAATT TTTATTTTTT ATTTTTTTTT TCTTTAATTA
AATTTCATTC ATTTNTTTTT TTTNCATTAC TGCCAAAAAA AAGGANGAAN
TAANTAAAAN TTAAGAAANT ANTANTNGCA NTNGAANTTT AATNTAAANG
NGTAAAATAN TANTNTNTNT AAATTNTAAA AANGTC---- ------ATTC
CAGAATATTC AGAACTTAGT TCTATTGAAG GTCTTGTTGA AGGCGCTACC
TTGGAAATGG TACCAGTCGA TTACAATGAG AGATCAGCAA AATTACACGT
TAAAAGATTA AGAGATATTA TGAATACAGG TTTAACAGAA TTTGCCAATA
TGAATAATCC AAGTCTTTTC ACAAGTTTTT CATTCCCAGA GAAATCAAAT
ATTTTAACTG AAGAACAACA ATTAGAAGAA CAAAAACAAA AATTTGAACA
ACAACAACAA CAACAACAAC AAACTGAAGA TAAAGAGGAA AAAGAAACTA
TAGCAACTGA ACAACAACAA AATAAAAAGA ATAAACATCA TAATAAAAAA
GGTAATAAAA AGAATAATGG TGATGAATCA TTGAATAATG AAAATAATGA
AGAGAAGTTA ACACCACAAC AAAAAGAGAG AAAACAAAAG ATGACAGAGA
TTAAAGGTAT TGATAAACCA ATGTTAAGTA GTTATTATCC AGAGAGTCCA
ATTGCACCAG TTCAATGTGT TAAATCAATG ATTTACAGTG GTTGGTCACC
AGTACCAGGA TATAGAAAAT TGTTTGGTGA TTTATTCTAT TTGGATATCA
CATTATTAGA GGGTACAACC ATTTGTGTTA CAGCATCAAC TCAAGGTTTT
TTCATTAATC AATCAAGCAA TGCAACATTC AATCCATCAG TTTCACCAAA
GGCAACCATC AATCATAGTT TACATCAATT ATTGACCCAA GTTTCAAGAT
TATTCCGTCG TGGTTTAAAT CAAATCCTTA CAAACATTGG TCGTAATCAT
CCATTCGATA TGCTTCCAGG CGTATTACCA GTACACAATT GGGTTGCCTC
ATCAAAGACC AATCGTTACG ATATCAATAA AGGTACCGAT ACTTTTGTTA
GCGTACAAGA CGTTGAGTTG CGTGGCAATC CTCGTGATTG GAACGAAGAG
ATCCAAGCAC CAAAGGAGTT ACCAAAATCA ACCGTTCAAG AACGTATCAT
TAGAGATCGT GCTATCAGTA AGGTAAATTC TGAATTTGTT GAATGCGCAA
TTCGTGGTGC TCAAGTCATT GTCGATAAAG CAATTCTTCC AATTAATCCA
GCTGAAAATC AAAGAAGTCA TATGTTCCTC TACAATAATA TCTTCTTTTC
CTATGCATTG GACACTCGTG ATTCTTTCAC CGATTGTGGT GGTGATGATG
CTGCTCGTAC ATCTGCAAAC AATGATCTCA AAGGTATTCG TTTATATAAT
TTAGCCGATA TTGATGGTCT TTACACTTTA GGTACTGCCA TCGTAGATTA
TAAAGGCCAA AGAATCATTG CTCAATCTTT AATTCCTGGT ATTTTAACAA
CNAAAAAACT TCAAAAATTT ATTAGGTTCA AGGATACACC AACAAATAAG
AAGAA

Translated Amino Acid Sequence Contig-U11979-1

rlfkyiylnsfiylfff*kks*flffiffffn*isfixffxitakkkxexxkx*exxxxx
xxlx*XXKIXXXXNXKXV---

---IPEYSELSSIEGLVEGATLEMVPVDYNERSAKLHVKRLRDIMNTGLTEFANMNNPSL
FTSFSFPEKSNILTEEQQLEEQKQKFEQQQQQQQQTEDKEEKETIATEQQQNKKNKHHNK
KGNKKNNGDESLNNENNEEKLTPQQKERKQKMTEIKGIDKPMLSSYYPESPIAPVQCVKS
MIYSGWSPVPGYRKLFGDLFYLDITLLEGTTICVTASTQGFFINQSSNATFNPSVSPKAT
INHSLHQLLTQVSRLFRRGLNQILTNIGRNHPFDMLPGVLPVHNWVASSKTNRYDINKGT
DTFVSVQDVELRGNPRDWNEEIQAPKELPKSTVQERIIRDRAISKVNSEFVECAIRGAQV
IVDKAILPINPAENQRSHMFLYNNIFFSYALDTRDSFTDCGGDDAARTSANNDLKGIRLY
NLADIDGLYTLGTAIVDYKGQRIIAQSLIPGILTTKKLQKFIRFKDTPTNKK

Homology Contig-U11979-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11979-1 (Contig-U11979-1Q) /CSM_Contig/Conti...  1953  0.0
Contig-U10970-1 (Contig-U10970-1Q) /CSM_Contig/Conti...    38  0.030
Contig-U09473-1 (Contig-U09473-1Q) /CSM_Contig/Conti...    38  0.030
Contig-U14465-1 (Contig-U14465-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U11325-1 (Contig-U11325-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U11005-1 (Contig-U11005-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U09406-1 (Contig-U09406-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U06822-1 (Contig-U06822-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U06267-1 (Contig-U06267-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U05582-1 (Contig-U05582-1Q) /CSM_Contig/Conti...    36  0.12

Homology Contig-U11979-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(U49332) Dictyostelium discoideum 150-kD protein (cluA) mRNA...  1871   0.0    3
(BJ399966) Dictyostelium discoideum cDNA clone:dds8p06, 3' e...  1532   0.0    1
(BJ421686) Dictyostelium discoideum cDNA clone:ddv43c13, 5' ...  1179   0.0    1
(BJ419265) Dictyostelium discoideum cDNA clone:ddv35f15, 5' ...   842   0.0    1
(BJ427590) Dictyostelium discoideum cDNA clone:ddv62m20, 5' ...   414   0.0    2
(BJ388167) Dictyostelium discoideum cDNA clone:dds8p06, 5' e...    62   8e-05  1
(CT797314) Pan troglodytes chromosome X clone CH251-171B18 m...    42   0.69   3
(EI252157) ZMMBBc0294F04.fv ZMMBB_VAL Zea mays genomic clone...    48   1.1    1
(EX286153) 1573995_5_O09_033 PY06 Carica papaya cDNA, mRNA s...    48   1.1    1
(EX279232) 1566108_5_F18_075 PY06 Carica papaya cDNA, mRNA s...    48   1.1    1

Homology Contig-U11979-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(O15818) RecName: Full=Protein KIAA0664 homolog;                      778   0.0
AL607024_2(AL607024|pid:none) Mouse DNA sequence from clone RP23...   261   5e-68
AK154146_1(AK154146|pid:none) Mus musculus NOD-derived CD11c +ve...   261   5e-68
AK154925_1(AK154925|pid:none) Mus musculus NOD-derived CD11c +ve...   261   5e-68
AK157310_1(AK157310|pid:none) Mus musculus activated spleen cDNA...   261   5e-68
CR627449_1(CR627449|pid:none) Homo sapiens mRNA; cDNA DKFZp686L0...   261   5e-68
AB093256_1(AB093256|pid:none) Mus musculus premature mRNA for mK...   261   5e-68
(Q8CHD9) RecName: Full=Protein KIAA0664;                              261   5e-68
AK036540_1(AK036540|pid:none) Mus musculus adult male bone cDNA,...   261   5e-68
AK125717_1(AK125717|pid:none) Homo sapiens cDNA FLJ43729 fis, cl...   261   7e-68