Dictyostelium discoideum cDNA Contig-U11959-1

Assembled

Chromosomal Location of Contig-U11959-1

Sequence Contig-U11959-1

ATTATTTTTA AAATGAATAG ATGTGAAACA GTTTGTATAA TTGGAAGTGG
TCCATCAGGT TTAACATCAT GTAAATCAGC ATTAGAATGT GGTTTAGAAC
CAACTGTTTT TGAAAAAAAA GAAACATTTG GTGGAGTTTG GTCACTTGAT
GAAGCTATAC CTTGGGATTC AATGCATACC AATGTATCTC ATTTTTCAAT
GACATTTTCA GATTTCCAAC ATCCAGAAGA TCAAGATCTA TTTTTATCAC
CAAAAAAAGT TCATCAATAC CTATCAAATT ATGCAAATCA TTTTGGACTT
TTAAATTGTA TCAAATTTGG TAGTACTGTT GAAAAAGTAA AACAACTCGA
AAATAATAAA TGGTTAGTCC AATGGACAGA TTCCTCAAGT AAAAAAAGTG
AATCAAAAAT TTTTGATTTC TTAATTGTTG GTAATGGAAT GAATAATAAA
CCAAGACAAT TTCCAATGGA ACCATTAAAA AATTTTACTG GTGGATATAG
ATATTCAAAT CAATATAAAT CACCAAATGA ATATATTGGT AAAAGAGTTT
TAGTTGTTGG TAAATCATGT ACTGGTTTAC AAATTGCTTC AGAACTTTGT
---------- AAACCATTTC AAATTTTATT TACTTGTATC GATTCCTATA
TTGATAATAT TAAACAAGGT AAAATTCAAT GTTTATCAAA TCATCTATTA
AATAATTCAA ATGATAAATC ATTGGAATTC TTAAATCAAT TGGATCAATC
AATAATTAAT ATTGAATTTG ATGAAATTAT CTTTGCAACT GGTTATCATT
TAAATTTTTC ATTTTTTGAA AAAGAAATTT TAGAAAAATT ATCATTTAAT
CCAAATGATA ATTATGTACC ATGTTTATTA TATAATTTTA CTTTTCCTCA
TAAAGTTAAA AATTTAGGTT TAGTTGGAAT TTTTGGTACT CCATTTTATT
CATTATTGGA ACTTCAATCT AGATGGATTA ACTATGTATT TTCTGGATTA
ATAGATTTAC CTTCAGAAAA AGAAATGGGA CAAGATATAA TTAAAATTAA
TGAAATTAGA AATGCAAAAA TGAAGACATT ATTCCCATTT GGTGATTATG
TTTTATTTTC TGATCAATTA GCAAAACAAA TTAATTGTTT ACCAGATTTT
GATGAAATGA AATTAAATAA CCCAGAACTT TATGATATGT GTTTAAACTA
TGTTTCTTGC TCCTCTGTAT TTAGATTAAC AGGTCCATTC TCAAATGAAA
AACAAGCTTT AAATACAATT AAACATTTCA GTGAATGTTG TAAAAAAATT
AATAACTAAT AATCTAAACA AAATAAAGTT TTATATCTTT ATCCAGAAAA
AAAAAAAAAA

Translated Amino Acid Sequence Contig-U11959-1

IIFKMNRCETVCIIGSGPSGLTSCKSALECGLEPTVFEKKETFGGVWSLDEAIPWDSMHT
NVSHFSMTFSDFQHPEDQDLFLSPKKVHQYLSNYANHFGLLNCIKFGSTVEKVKQLENNK
WLVQWTDSSSKKSESKIFDFLIVGNGMNNKPRQFPMEPLKNFTGGYRYSNQYKSPNEYIG
KRVLVVGKSCTGLQIASELC---

---KPFQILFTCIDSYIDNIKQGKIQCLSNHLLNNSNDKSLEFLNQLDQSIINIEFDEII
FATGYHLNFSFFEKEILEKLSFNPNDNYVPCLLYNFTFPHKVKNLGLVGIFGTPFYSLLE
LQSRWINYVFSGLIDLPSEKEMGQDIIKINEIRNAKMKTLFPFGDYVLFSDQLAKQINCL
PDFDEMKLNNPELYDMCLNYVSCSSVFRLTGPFSNEKQALNTIKHFSECCKKINN**skq
nkvlylypekkkk

Homology Contig-U11959-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11959-1 (Contig-U11959-1Q) /CSM_Contig/Conti...  1386  0.0
Contig-U05464-1 (Contig-U05464-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U11881-1 (Contig-U11881-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U08220-1 (Contig-U08220-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U01716-1 (Contig-U01716-1Q) /CSM_Contig/Conti...    38  0.024
Contig-U12493-1 (Contig-U12493-1Q) /CSM_Contig/Conti...    36  0.096
Contig-U12054-1 (Contig-U12054-1Q) /CSM_Contig/Conti...    36  0.096
Contig-U03592-1 (Contig-U03592-1Q) /CSM_Contig/Conti...    36  0.096
Contig-U02520-1 (Contig-U02520-1Q) /CSM_Contig/Conti...    36  0.096
Contig-U01919-1 (Contig-U01919-1Q) /CSM_Contig/Conti...    36  0.096

Homology Contig-U11959-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ389558) Dictyostelium discoideum cDNA clone:dds19o05, 5' ...   402   0.0    4
(BJ377519) Dictyostelium discoideum cDNA clone:ddc24l22, 3' ...   878   0.0    4
(BJ401726) Dictyostelium discoideum cDNA clone:dds19o05, 3' ...   878   0.0    4
(BJ398687) Dictyostelium discoideum cDNA clone:dds1i17, 3' e...   872   0.0    2
(C25679) Dictyostelium discoideum slug cDNA, clone SSB173.        678   0.0    2
(BJ387315) Dictyostelium discoideum cDNA clone:dds1i17, 5' e...   260   e-170  3
(AU071294) Dictyostelium discoideum slug cDNA, clone SSB173.       96   4e-47  3
(GR581532) CBZZ1425.g1 CBZZ Dictyostelium purpureum 18 hr st...    62   6e-05  1
(GR581531) CBZZ1425.b1 CBZZ Dictyostelium purpureum 18 hr st...    62   6e-05  1
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    32   0.003  24

Homology Contig-U11959-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP001102_506(CP001102|pid:none) Candidatus Amoebophilus asiaticu...   148   4e-34
BC060427_1(BC060427|pid:none) Xenopus laevis hypothetical protei...   127   7e-28
EU519462_1(EU519462|pid:none) Oncorhynchus mykiss flavin-contain...   122   2e-26
AJ431390_1(AJ431390|pid:none) Gallus gallus mRNA for flavin-cont...   121   5e-26
BC091044_1(BC091044|pid:none) Xenopus tropicalis fmo3 protein, m...   121   5e-26
CS276936_1(CS276936|pid:none) Sequence 3 from Patent EP1634961.       121   5e-26
(Q5REK0) RecName: Full=Dimethylaniline monooxygenase [N-oxide-fo...   121   7e-26
(Q28505) RecName: Full=Dimethylaniline monooxygenase [N-oxide-fo...   120   1e-25
AY892619_1(AY892619|pid:none) Synthetic construct Homo sapiens c...   120   1e-25
AL021026_3(AL021026|pid:none) Human DNA sequence from clone RP1-...   120   1e-25