Homology Contig-U11943-1 vs Protein

Query= Contig-U11943-1 (Contig-U11943-1Q) /CSM_Contig/Contig-U11943-1Q.Seq.d
         (882 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54673) RecName: Full=Phosphatidylinositol 3-kinase 1;         ...    35   2.6
AF091239_1(AF091239|pid:none) Plasmodium falciparum c-13 antigen...    29   9.2

>(P54673) RecName: Full=Phosphatidylinositol 3-kinase 1;
           Short=PtdIns-3-kinase;          Short=PI3-kinase;
             Short=PI3K;          EC=2.7.1.137;
          Length = 1571

 Score = 35.4 bits (80), Expect = 2.6
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 712 SENNNNSQNVTPKLKSFKNKLDSELLQSLEALIDSPQNVSNSNIDNC 852
           ++NNNN+ N+  K K  KNK + E+ Q +       + + NSN  NC
Sbjct: 65  NDNNNNNNNIDKKRKDSKNKQNQEINQEM----SENKKIYNSNDSNC 107

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 713,301,845
Number of extensions: 15400503
Number of successful extensions: 25686
Number of sequences better than 10.0: 2
Number of HSP's gapped: 25554
Number of HSP's successfully gapped: 3
Length of query: 294
Length of database: 1,051,180,864
Length adjustment: 127
Effective length of query: 167
Effective length of database: 640,137,871
Effective search space: 106903024457
Effective search space used: 106903024457
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)




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