Dictyostelium discoideum cDNA Contig-U11923-1

Assembled

Chromosomal Location of Contig-U11923-1

Sequence Contig-U11923-1

TAAAACAAAA ATACGAACCA AAATCTAATA GGTATTCAAC ATCATCACCT
ATTGCTATAT CATCACCAAA TTTATCAACT CTTATATCAA CACCAACCAC
TTTAAATGGT AAAATCAGTT CAACAACATC AACATCAACA TCACCATCAC
CATCACCATC ATCATCATCA CCAACATCTT CACCAACATC ATCTACAACC
ACTATTTCAC CATCACCAAC ATCATCTTCA ACATCAATTG CATTAGCATC
AACATCACCA TCATCGACAT CAATAGCATT AGCATCATCA CCAATAAATA
TATCATCACC ACCATCTTCA CCAATTTCAC ATCAACCAAT ATCTGTATCG
CATTCAAATT CATCATCAGA AGATTTAATA GCTTCATCAA GTAATAAACA
TTCTAAAAAA GATCGTAGTA ATAGCAATGA TAAAGATAAA GATAAAGACA
AAGATAAAGA TAAAATCAAA GATCATACAG ACTCAAATAG TAAAGGTGAT
AAAGAAGAAA GAAAAACAGG TATGGGTAAA AAGTTATTTA GTAAATTATT
AGATCCAACA AAGAAATCAT CAGGTAGTAG TTTGAATTTA TTAAGTAATT
CAAATGGTGG TGGTGGTGGT GGTGGCAGTG GAAG------ ----NNNNNN
NNNTAGCTGC TGATTCAACA GATCCAAATG AAATCTCAAA TCGTATCCTT
GAACATTGTT GGAATACTAC TGTTGCTTCA AGATTTTTCA TGGAAAATAA
TGCTGGTAAA AGACTACCAG AAGATTATTC AAAATATCCT GGTAAAATGG
ATCATACAAG TATAATTTGT TTTAAAGTCG GTCATTTTGG TCCAAAAAAT
AATTATCCAA CTGTCATTGG TGGAGGTGTT GGTAGTGGTG TTAGTGTTGG
TGGTGGTAAC CCAACAATTA TAATCGATCC TCATAATAAT ACAATTAGTG
GTGAACCATT TGTTCAACAA AATAATACTG GCACCACCTC TACAAGAGCT
GATTGGATTA AAGTTTCACC ATCAAATAAT AAATATCATA ACTCATCTCT
AAAGAAAACA AGTTCCGAAA CAAATGTTTT CCCAAATAGT AATAATAATG
GTACCATTGG TAGAGTTTCC ATTTCTGCTA CAAGTACTCC TGATCTTGGT
TCTTTAAAAG TTAGTGATGG TTCTTGCGAC AGTGGTGAAG GTAGTATTGT
AAATTCTTCT GATTCAAGTC CAAGATATAA ATAACATAAT AATAATAATA
TAAATAACAT AATAATAATA ATAATTATAT TTCTTTTTTT GAATCCATAC
ATAATTATAT ACTTATATAA ATTAATTCAT ATTTATAATG TAACACAATT
AAAACTATAA TTAACTAAAA CATTTATTGT AGATTTAAAT ATTTAAAA

Translated Amino Acid Sequence Contig-U11923-1

KQKYEPKSNRYSTSSPIAISSPNLSTLISTPTTLNGKISSTTSTSTSPSPSPSSSSPTSS
PTSSTTTISPSPTSSSTSIALASTSPSSTSIALASSPINISSPPSSPISHQPISVSHSNS
SSEDLIASSSNKHSKKDRSNSNDKDKDKDKDKDKIKDHTDSNSKGDKEERKTGMGKKLFS
KLLDPTKKSSGSSLNLLSNSNGGGGGGGSGXXX---

---AADSTDPNEISNRILEHCWNTTVASRFFMENNAGKRLPEDYSKYPGKMDHTSIICFK
VGHFGPKNNYPTVIGGGVGSGVSVGGGNPTIIIDPHNNTISGEPFVQQNNTGTTSTRADW
IKVSPSNNKYHNSSLKKTSSETNVFPNSNNNGTIGRVSISATSTPDLGSLKVSDGSCDSG
EGSIVNSSDSSPRYK*hnnnninniiiiiiiflflnpyiiiylyklihiynvtqlkl*lt
ktfivdlni*

Homology Contig-U11923-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11923-1 (Contig-U11923-1Q) /CSM_Contig/Conti...  1132  0.0
Contig-U14261-1 (Contig-U14261-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U11146-1 (Contig-U11146-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U09189-1 (Contig-U09189-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U13062-1 (Contig-U13062-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11697-1 (Contig-U11697-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11532-1 (Contig-U11532-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11207-1 (Contig-U11207-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U10168-1 (Contig-U10168-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U12590-1 (Contig-U12590-1Q) /CSM_Contig/Conti...    38  0.025

Homology Contig-U11923-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ407983) Dictyostelium discoideum cDNA clone:dds44e08, 3' ...  1132   0.0    1
(BJ348908) Dictyostelium discoideum cDNA clone:dda34b23, 3' ...  1132   0.0    1
(BJ385481) Dictyostelium discoideum cDNA clone:ddc55i03, 3' ...  1118   0.0    1
(BJ408643) Dictyostelium discoideum cDNA clone:dds46b13, 3' ...  1104   0.0    1
(BJ383494) Dictyostelium discoideum cDNA clone:ddc53a11, 3' ...  1041   0.0    1
(BJ404225) Dictyostelium discoideum cDNA clone:dds27f22, 3' ...   543   0.0    3
(BJ404093) Dictyostelium discoideum cDNA clone:dds27f11, 3' ...   862   0.0    2
(AU270895) Dictyostelium discoideum vegetative cDNA clone:VS...   854   0.0    2
(BJ370711) Dictyostelium discoideum cDNA clone:ddc55i03, 5' ...   274   e-172  3
(DH708923) Rattus norvegicus DNA, BAC clone: RNB1-271O19, 5'...    58   9e-09  2

Homology Contig-U11923-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P18160) RecName: Full=Dual specificity protein kinase dpyk1;   ...    41   0.12
T18276(T18276;A35670) protein-tyrosine kinase (EC 2.7.1.112) 1 -...    41   0.12
FM992691_520(FM992691|pid:none) Candida dubliniensis CD36 chromo...    40   0.20
(Q54R73) RecName: Full=Uncharacterized protein DDB_G0283357;           39   0.35
BX294153_199(BX294153|pid:none) Rhodopirellula baltica SH 1 comp...    38   1.0
(Q54Y90) RecName: Full=Probable serine/threonine-protein kinase ...    37   1.3
T46726(T46726) secreted acid phosphatase 2 precursor [imported] ...    37   1.7
AY344225_1(AY344225|pid:none) Candida glabrata Epa5p (EPA5) and ...    37   1.7
CP000102_47(CP000102|pid:none) Methanosphaera stadtmanae DSM 309...    37   2.2
AC115680_2(AC115680|pid:none) Dictyostelium discoideum chromosom...    37   2.2