Homology Contig-U11869-1 vs Protein
Query= Contig-U11869-1 (Contig-U11869-1Q) /CSM_Contig/Contig-U11869-1Q.Seq.d
(2237 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC115598_15(AC115598|pid:none) Dictyostelium discoideum chromoso... 69 1e-09
AC116100_1(AC116100|pid:none) Dictyostelium discoideum chromosom... 62 9e-08
AC116956_73(AC116956|pid:none) Dictyostelium discoideum chromoso... 59 6e-07
FJ374945_1(FJ374945|pid:none) Dictyostelium discoideum strain QS... 51 1e-06
FJ374949_1(FJ374949|pid:none) Dictyostelium discoideum strain QS... 51 1e-06
FJ374931_1(FJ374931|pid:none) Dictyostelium discoideum strain QS... 51 1e-06
FJ374943_1(FJ374943|pid:none) Dictyostelium discoideum strain QS... 51 1e-06
FJ374930_1(FJ374930|pid:none) Dictyostelium discoideum strain QS... 47 2e-06
FJ374951_1(FJ374951|pid:none) Dictyostelium discoideum strain QS... 44 2e-05
A54280(A54280) cell differentiation protein LagC precursor - sli... 47 3e-05
FJ374933_1(FJ374933|pid:none) Dictyostelium discoideum strain QS... 40 1e-04
FJ374923_1(FJ374923|pid:none) Dictyostelium discoideum strain QS... 40 1e-04
FJ374944_1(FJ374944|pid:none) Dictyostelium discoideum strain QS... 51 2e-04
FJ374927_1(FJ374927|pid:none) Dictyostelium discoideum strain QS... 38 0.002
FJ374925_1(FJ374925|pid:none) Dictyostelium discoideum strain QS... 38 0.008
FJ374952_1(FJ374952|pid:none) Dictyostelium discoideum strain QS... 45 0.011
FJ374957_1(FJ374957|pid:none) Dictyostelium discoideum strain QS... 37 0.018
FJ374956_1(FJ374956|pid:none) Dictyostelium discoideum strain QS... 37 0.018
FJ374958_1(FJ374958|pid:none) Dictyostelium discoideum strain QS... 37 0.018
FJ374967_1(FJ374967|pid:none) Dictyostelium discoideum strain QS... 37 0.018
FJ374959_1(FJ374959|pid:none) Dictyostelium discoideum strain QS... 37 0.018
FJ374960_1(FJ374960|pid:none) Dictyostelium discoideum strain QS... 37 0.018
FJ374964_1(FJ374964|pid:none) Dictyostelium discoideum strain QS... 37 0.018
FJ374962_1(FJ374962|pid:none) Dictyostelium discoideum strain QS... 37 0.018
FJ374955_1(FJ374955|pid:none) Dictyostelium discoideum strain QS... 37 0.018
FJ374954_1(FJ374954|pid:none) Dictyostelium discoideum strain QS... 37 0.018
FJ374941_1(FJ374941|pid:none) Dictyostelium discoideum strain QS... 35 0.018
FJ374948_1(FJ374948|pid:none) Dictyostelium discoideum strain QS... 35 0.039
AC116982_60(AC116982|pid:none) Dictyostelium discoideum chromoso... 37 0.066
AC117076_23(AC117076|pid:none) Dictyostelium discoideum chromoso... 42 0.096
AF310896_4(AF310896|pid:none) Dictyostelium discoideum RacJ (rac... 40 0.36
AE017245_383(AE017245|pid:none) Mycoplasma synoviae 53, complete... 37 2.4
CP001614_1500(CP001614|pid:none) Teredinibacter turnerae T7901, ... 37 3.1
>AC115598_15(AC115598|pid:none) Dictyostelium discoideum chromosome 2
map 581427-735498 strain AX4, complete sequence.
Length = 977
Score = 68.6 bits (166), Expect = 1e-09
Identities = 29/71 (40%), Positives = 49/71 (69%)
Frame = +1
Query: 826 GGQVLIFGGNFYDPIESVTIGGVKCINPIFIDYDKLSCNLLPSKIKSNSDNLLYVNVTVG 1005
GG+++IFG FYD I+++ IG V+CI+ FI + ++C L P+ K + ++++N+T+
Sbjct: 817 GGELVIFGDCFYDIIDNIHIGPVQCIDSKFISSNAIACTLPPTADKHLLNQIMFINITIA 876
Query: 1006 GQSGGGNIFKY 1038
G+SGGG F Y
Sbjct: 877 GKSGGGYAFSY 887
Score = 60.8 bits (146), Expect = 2e-07
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Frame = +3
Query: 21 DGSLSYQFQ-FPRGCGKKLIQVEIGNQFVNSSFSYSPPITMYCNKSETDSMLMNCXXXXX 197
DGS +Y F FP CG + +Q EIGNQ N + + P C T S N
Sbjct: 604 DGSSTYIFNNFPGVCGVQSLQYEIGNQTYNGTVTSLQPSYANC----TYSPETNITLCTG 659
Query: 198 XXXXXXXXEDSTIITFSNQTISTISFNDTMFSFKLKESYYKSNLHINVCGIDSLIDYEIK 377
+ II FSN TI+ I+ DT F+F ++Y +L IN CG DS + I
Sbjct: 660 TNFGGSYFDKQVIIQFSNSTITPINITDTEFTFYTYDNYVSGHLTINSCG-DSADTFYII 718
Query: 378 LDSLLKSITLFDKFNTSGGFILINGDYLSLDNIQPI 485
++ N+ +++NG + + + I
Sbjct: 719 NAVYFSNVAEGFHNNSPNDAVIVNGKFFASSGVVSI 754
Score = 48.1 bits (113), Expect = 0.001
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 8/150 (5%)
Frame = +3
Query: 1569 YFTKWSLLRHVGERNDIRLVLDFTCNLNSTNKEERICTTSMTGK--MAQLYGEDWYCNAV 1742
Y+TKW + + G + + F C N+T K CT + G M +LYG +
Sbjct: 151 YYTKWEITKADGNITE----MSFQCTNNATIKS---CTYTNNGTPPMNELYGISGMPCYM 203
Query: 1743 SGANGQTYSNHLPDSLYPFPIIYNYTKPS--TQGSIITVSGEYLRFGTGNPFNI----GG 1904
G++ + L S YP PII N T PS G+ IT+ G ++ F GN N G
Sbjct: 204 DGSSTEKCQGILQPSHYPTPII-NSTIPSIPVDGTSITLVGSFIIFIVGNDSNYFQLSSG 262
Query: 1905 MTVNMTDRDQFYTDKFDSNNIRFDFPSGCG 1994
N D + + PSGCG
Sbjct: 263 GIANFNS-----PIHLDPTQMIINIPSGCG 287
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,461,758,032
Number of extensions: 41564996
Number of successful extensions: 115395
Number of sequences better than 10.0: 33
Number of HSP's gapped: 114238
Number of HSP's successfully gapped: 62
Length of query: 745
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 609
Effective length of database: 611,008,840
Effective search space: 372104383560
Effective search space used: 372104383560
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home