Dictyostelium discoideum cDNA Contig-U11869-1

Assembled

Chromosomal Location of Contig-U11869-1

NO HIT FOUND.

Sequence Contig-U11869-1

AACCAAATTC AATATCATAT GATGGTAGTT TATCATACCA ATTTCAATTT
CCAAGAGGAT GTGGTAAAAA ATTAATTCAA GTTGAAATTG GTAATCAATT
TGTAAATTCA TCATTCTCTT ATAGTCCACC AATTACAATG TATTGTAATA
AAAGTGAAAC TGATTCAATG TTAATGAATT GTTTTGGTGA TAATTTTGGT
AATGGTGATG GTAATGGTGG TGAAGATTCA ACAATTATAA CATTTTCAAA
TCAAACAATT TCAACAATTT CATTTAATGA TACAATGTTT TCATTTAAAT
TAAAAGAAAG TTATTATAAG AGTAATTTAC ATATTAATGT TTGTGGTATT
GATAGTTTAA TTGATTATGA AATTAAATTA GATTCATTAT TAAAGAGTAT
TACATTATTT GATAAGTTCA ATACATCTGG TGGTTTTATA CTTATAAATG
GTGATTATTT ATCATTAGAT AATATCCAAC CCATCATTTA AATGCTCGTT
TGATAATACC ACTTATTCAT CAGATCAATG TAAATTAATT AATGGCACTG
AAATCAAATG TTTAGTATCA TCATCTAGTA GTGGAGATTC AACAAAATTC
AATAAAACAT GTTCACTTTA TTTAAATGGT ATTGAACAAG TTGATAAAAA
AGTTCAAATA TATTATCATT CTCCATTTGT TTTAAATTTT ACAACTACAA
CAACTACAAC TACAACAAAT ACCTCAAAAG TTGAAAATAA AAAAATGGAA
GCAAATGGAA ATAGTAATAA TAATAATATT GTATCTTCTA CAACTTTTAA
AAGAATTCCA ATTTATAAAT CAAAAGGTGG TCAAGTTTTA ATATTTGGTG
GTAATTTTTA TGATCCAATT GAAAGTGTTA CAATTGGTGG TGTTAAATGT
ATAAATCCAA TATTTATTGA TTATGATAAA TTATCTTGTA ATTTATTACC
ATCAAAAATA AAATCAAATT CAGATAATTT ATTATATGTA AATGTAACAG
TTGGCGGTCA AAGTGGTGGT GGTAATATTT TCAAATATGA TATTGATGAA
TTAAATGAAA ATGAAAATAA TGATGATGAC GATGATAATG AAAGTGAAAA
AAATAAGAGA TTAAGATGGT TGGTACCAGC AATAATTATA CCAATAGTTT
TCGTTATTGG AGGTTTATCA GTGTTGGTAT TTATATTTAA AAAGAAATTA
CCATGTTTCT CTAAAAATAA TAATGAATTA AAAAATAAAT AAAAATAAAA
ATAAAAATAA AAATAAAAAT AATCCAAGGA AAAATAAAAA TAAAAATAAC
AACTACCTAA AACTAAAAAA TAAAGTAAAA ATAAAATAAA ATAAATAAAA
ATAAGAAATA AAAATAAAAA CCCCAAATT- ---------A AATTATTTAA
ATAATAAGAT TTATAAAAAT ATTTAATTAT AAAATGATGA AGTTATTATT
TTCAATTATT TTCACCTTAT TATTTATTAA TTCAATTTAT TCTCAATATG
TTAGCCCATT AAGAATTAAT TATTATCTTA ATGATAATAT TACAATTGTT
ACAAATGTTA CAAAATATTA TTTTACAAAA TGGTCATTAT TGAGACATGT
AGGAGAAAGA AATGATATTA GATTAGTTTT GGATTTTACT TGTAATTTAA
ATTCAACAAA TAAGGAAGAA AGAATTTGCA CTACATCAAT GACCGGCAAA
ATGGCTCAGC TTTATGGTGA AGATTGGTAT TGTAATGCAG TTAGTGGTGC
AAATGGTCAA ACTTATAGTA ATCATTTACC AGATTCATTA TACCCATTTC
CAATAATATA TAATTATACA AAACCATCAA CACAAGGTAG TATTATAACT
GTTAGTGGTG AATATTTAAG ATTTGGTACT GGTAATCCAT TTAATATCGG
TGGTATGACT GTAAATATGA CAGATAGGGA TCAATTCTAT ACCGACAAAT
TCGATAGTAA TAATATCCGT TTCGATTTTC CATCTGGTTG TGGTACTGTA
CTTTTCAACC TAAATGAACA TATCTCAACC TTTAATACAA ATATTCAATA
TCAAAAATCC AAAAATTAAA AATTTCAACA ATTAAATTCA ATTTTGATAG
CAATAATAAT AATATTGAAA AATTATCAAA AATTCAATTA AATGGTGATA
ATTTTTGTAA TAATGTTTCA TTAGTTAATG TTACAATTGG TAATGAATTA
ATTAATAGTA ATGATATGAT TTCAGTTGAT CATGGTG

Translated Amino Acid Sequence Contig-U11869-1

nqiqyhmmvvyhtnfnfqedvvkn*fklklvinl*ihhslivhqlqcivikvkliqc**i
vlviilvmvmvmvvkiqql*hfqikqfqqfhlmiqcfhln*kkviirviyilmfvvliv*
limkln*ihy*rvlhylissihlvvlyl*mviiyh*iisnpsfkcsfdnttyssdqckli
ngteikclvsssssgdstkfnktcslylngieqvdkkvqiyyhspfvlnftttttttttn
tskvenkkmeangnsnnnnivssttfkripiykskggqvlifggnfydpiesvtiggvkc
inpifidydklscnllpskiksnsdnllyvnvtvggqsgggnifkydidelnenennddd
ddneseknkrlrwlvpaiiipivfvigglsvlvfifkkklpcfsknnnelknk*k*k*k*
k*k*skek*k*k*qlpktkk*sknkik*IKIRNKNKNPK---

---NYLNNKIYKNI*l*ndeviifnyfhliiy*fnlfsic*pikn*lls***yyncykcy
kilfykmviietcrrkk*y*isfgfyl*fkfnk*grknlhyindrqngsalw*rlvl*cs
*wckwsnl**sftrfiipisnni*lyktintr*yync*w*ifkiwyw*si*yrwydckyd
r*gsilyrqir***ypfrfsiwlwyctfqpk*tylnl*ykysiskiqklkistikfnfds
nnnnieklskiqlngdnfcnnvslvnvtignelinsndmisvdhg

Homology Contig-U11869-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11869-1 (Contig-U11869-1Q) /CSM_Contig/Conti...  2004  0.0
Contig-U13138-1 (Contig-U13138-1Q) /CSM_Contig/Conti...    56  2e-07
Contig-U14508-1 (Contig-U14508-1Q) /CSM_Contig/Conti...    52  3e-06
Contig-U06707-1 (Contig-U06707-1Q) /CSM_Contig/Conti...    52  3e-06
Contig-U14315-1 (Contig-U14315-1Q) /CSM_Contig/Conti...    50  1e-05
Contig-U01101-1 (Contig-U01101-1Q) /CSM_Contig/Conti...    50  1e-05
Contig-U03395-1 (Contig-U03395-1Q) /CSM_Contig/Conti...    48  4e-05
Contig-U14691-1 (Contig-U14691-1Q) /CSM_Contig/Conti...    46  2e-04
Contig-U11175-1 (Contig-U11175-1Q) /CSM_Contig/Conti...    46  2e-04
Contig-U11064-1 (Contig-U11064-1Q) /CSM_Contig/Conti...    46  2e-04

Homology Contig-U11869-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ384215) Dictyostelium discoideum cDNA clone:ddc48l14, 3' ...   993   0.0    2
(BJ378339) Dictyostelium discoideum cDNA clone:ddc31i17, 3' ...   946   0.0    2
(BJ407153) Dictyostelium discoideum cDNA clone:dds37k14, 3' ...   569   0.0    2
(BJ365969) Dictyostelium discoideum cDNA clone:ddc37b07, 5' ...   906   0.0    1
(BJ395202) Dictyostelium discoideum cDNA clone:dds38c01, 5' ...   850   0.0    1
(BJ380176) Dictyostelium discoideum cDNA clone:ddc37e07, 3' ...   420   0.0    2
(BJ368939) Dictyostelium discoideum cDNA clone:ddc48l14, 5' ...   569   0.0    3
(BJ407266) Dictyostelium discoideum cDNA clone:dds38c01, 3' ...   347   e-132  2
(U68754) Dictyostelium discoideum putative transcription fac...    56   2e-06  3
(AL929542) Zebrafish DNA sequence from clone CH211-159O22.         44   2e-05  7

Homology Contig-U11869-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC115598_15(AC115598|pid:none) Dictyostelium discoideum chromoso...    69   1e-09
AC116100_1(AC116100|pid:none) Dictyostelium discoideum chromosom...    62   9e-08
AC116956_73(AC116956|pid:none) Dictyostelium discoideum chromoso...    59   6e-07
FJ374945_1(FJ374945|pid:none) Dictyostelium discoideum strain QS...    51   1e-06
FJ374949_1(FJ374949|pid:none) Dictyostelium discoideum strain QS...    51   1e-06
FJ374931_1(FJ374931|pid:none) Dictyostelium discoideum strain QS...    51   1e-06
FJ374943_1(FJ374943|pid:none) Dictyostelium discoideum strain QS...    51   1e-06
FJ374930_1(FJ374930|pid:none) Dictyostelium discoideum strain QS...    47   2e-06
FJ374951_1(FJ374951|pid:none) Dictyostelium discoideum strain QS...    44   2e-05
A54280(A54280) cell differentiation protein LagC precursor - sli...    47   3e-05