<Clone: Contig-U11863-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U11863-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U11863-1

< more Chromosomal info >

Chromosome Number 3
Length 6358359
Start Poin 645,480
End Point 644,101
Strand MINUS

Sequence Contig-U11863-1

ATTATAGGAT TATGGTACTC CAACTGGTGA TCCAACCGAG GTAGAATCTG
TTTCAATGGT TTTTAAAGAT CATCATTCAA AATCAAATCC ATTAAGAATT
GGTTCAGTTA AAACCAACAT TGGCCATATG GAAGCAGCAA GTGGTGTTGG
TTCATTTATT AAAGTTTGTT TAAGTTTAAA ATATAAAAAA TTCATTCCAA
ACATTCATTT TGAAAGAATC AATCCAAAAA TTAAAATTGA TGAATGGAAT
TTAAAAGTTC AAACAGAATT AGAAGATTTT CCAAACAATT TAAAAATACC
AGTTGCAATT GGAATTAATA ATTTTGGTAT GTCTGGATCA TATGTTCATT
TAATTTTAGA AGAACCTCCA AGATTTATTG AAAAAGATAA AAAGTGAAAA
TGTGAAAGAA ATTATTTAAT CCCATTTTCA TCAAATTCAA TAAATTCTTT
AGATAGATAT TTAAATACAA TTAAAGAAAA TATTGGTTCA TGTTCTGGAA
AAATGAAATT TAAAGATTTT GTTAAAAAGC ATTGTTTATC AAAAACAATA
TTTTCTGGTG CTCGTAATAT TGTATCGGTA AATAATTGGA ATGATTTAAA
TGAAATTGAA AAATCAATA- ---------- ---------N NNNNNNNNAA
GTTCACTATC AAAAAGGTTT AGTGATAGAA TTAAAGAAAT TAATGGAAAG
GGTGTTGATT TGATTTTAGA TACTTTATCA GTTGAATTTT TGAAATATAA
TTTTGATGCA TTGAGTGAAA TTGGAAGAAT TTCACGTTTA TCAATGACTC
AATTAATTGA TAATGATAAT GTTGATTTAA ATAATTTCAA ATTTAATGTT
GGTTATAATA CAATAGATAT TGAAAGAGTT TGTAAACATA ATCCAAGAAT
TACTAATATT TTATCAGAAT AATTTAGAGA TATTGGCAAT AGTAAATTAG
AAATGATCCC AATTTCAGAA TTTTATGTCG AAAAAACAAA AAAAGCAATT
TATTATGTTA ATGATAGAAA ACACATTGGT AAAATTGTTG TTGATTTCCA
AAACTTTGAT CAATTTATTT CAAACTCTAC AATTAATAAG ACCATTATCA
AAACAAATTA TGAAATTAAT TCATTACCAT CAACTTTATT AATTACTGGT
CAAACTAGTA TTTCACCAAT TATTACAAAA TGGATTATTA ATCATGCACC
AAAACATTTA AAAGATATTA TAATAATTTC AAAATCAAGT TGTAAATGGG
AAGTTAAAAA ACTAATAAAC CAAAATAGAA ATTCAAACTA TGATGATTTA
AATAATTCAA TCAATACATT CTACAATAAT AATAAAAATG TTGAACCAGT
TGCATCAATT ATTCATTTGG CAACAATTTA GAATATNATT CACCAATATT
AGATA

Translated Amino Acid Sequence Contig-U11863-1

<All Frames> 
l*dygtptgdptevesvsmvfkdhhsksnplrigsvktnighmeaasgvgsfikvclslk
ykkfipnihferinpkikidewnlkvqteledfpnnlkipvaiginnfgmsgsyvhlile
epprfiekdkk*KCERNYLIPFSSNSINSLDRYLNTIKENIGSCSGKMKFKDFVKKHCLS
KTIFSGARNIVSVNNWNDLNEIEKSIXXX---

---XXXSSLSKRFSDRIKEINGKGVDLILDTLSVEFLKYNFDALSEIGRISRLSMTQLID
NDNVDLNNFKFNVGYNTIDIERVCKHNPRITNILSE*frdignsklemipisefyvektk
kaiyyvndrkhigkivvdfqnfdqfisnstinktiiktnyeinslpstllitgqtsispi
itkwiinhapkhlkdiiiiskssckwevkklinqnrnsnyddlnnsintfynnnknvepv
asiihlati*nxihqy*i


Homology Contig-U11863-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U11863-1 (Contig-U11863-1Q) /CSM_Contig/Conti...  1227  0.0
Contig-U12543-1 (Contig-U12543-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11458-1 (Contig-U11458-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11363-1 (Contig-U11363-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U01424-1 (Contig-U01424-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11360-1 (Contig-U11360-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U14040-1 (Contig-U14040-1Q) /CSM_Contig/Conti...    36  0.100
Contig-U12728-1 (Contig-U12728-1Q) /CSM_Contig/Conti...    36  0.100
Contig-U12617-1 (Contig-U12617-1Q) /CSM_Contig/Conti...    36  0.100
Contig-U11577-1 (Contig-U11577-1Q) /CSM_Contig/Conti...    36  0.100


Homology Contig-U11863-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ384046) Dictyostelium discoideum cDNA clone:ddc48e05, 3' ...   809   0.0    2
(BJ355828) Dictyostelium discoideum cDNA clone:dda58h12, 3' ...   618   0.0    6
(BJ368776) Dictyostelium discoideum cDNA clone:ddc48e05, 5' ...   755   0.0    2
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    40   6e-12  18
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    34   1e-09  20
(AE017308) Mycoplasma mobile 163K complete genome.                 36   6e-09  22
(AE017263) Mesoplasma florum L1 complete genome.                   34   9e-07  19
(CP001668) Mycoplasma mycoides subsp. capri str. GM12 transg...    36   9e-07  19
(CP001621) Mycoplasma mycoides subsp. capri str. GM12 transg...    36   1e-06  19
(CP000013) Borrelia garinii PBi, complete genome.                  34   1e-06  21


Homology Contig-U11863-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


(Q869X2) RecName: Full=Probable polyketide synthase 17;         ...   183   2e-44
(Q869W9) RecName: Full=Probable polyketide synthase 16;         ...   178   5e-43
(Q55DM7) RecName: Full=Probable polyketide synthase 2;          ...   174   9e-42
(Q54KU3) RecName: Full=Probable polyketide synthase 25;         ...   164   9e-39
AC117176_58(AC117176|pid:none) Dictyostelium discoideum chromoso...   161   6e-38
(Q54KU5) RecName: Full=Probable polyketide synthase 24;         ...   158   5e-37
(Q54ED6) RecName: Full=Probable polyketide synthase 41;         ...   158   5e-37
AC116982_23(AC116982|pid:none) Dictyostelium discoideum chromoso...   157   9e-37
(Q54QD1) RecName: Full=Probable polyketide synthase 23;         ...   150   8e-35
(Q54TW0) RecName: Full=Probable polyketide synthase 18;         ...   149   2e-34


<Clone: Contig-U11863-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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