Dictyostelium discoideum cDNA Contig-U11860-1

Assembled

Chromosomal Location of Contig-U11860-1

Sequence Contig-U11860-1

CTGTTGGCCT ACTGGGNAAA AAATGAAGGA GTTACATATA ATAAAAGATA
ACACATATTT ATAAAATCAA TTAAAAAAAA AGTGATCACA CACACAATAT
GAGAAAGGCT ATAAAAAAGA ATTTTATAAA ATTTACAGGA AGACTTGGAT
TTGGCTCACA AAAGAACAAT GAAATTGATG AGAATGCAAC AGATGAACAA
ATTATATCAG ATGAACCAAT TGAAACAATC GATCAACCAA TTAAATTAGA
GAATGGTGAA TTTGATCAAC TTATACAATC ATTTAAACAA TATTTATCAA
CTTGTATAAT TAAAGAAAAT AATAATATAG ATAAAAATAA TGAAAGTAAT
TCACCTCAAA TAATAATTGA TGAAGATTAT AATGATAATT ATGAGATATT
ATTTGATCTA NATTATTTTA TAAATGGTGA ATTCGAACCA TTAGATATAC
ATCATAGNGG CAATCATCAT AGTCATCATC ATCACCATCA TTCAACTACC
CCAAATTCGA GTAGTCTAAG NGTAAATAAA TCCTCTATAA TAAATAGTAA
TGAAA----- ---------- -----NNNNN NNNNTNATAA TATTNATAAT
AATAATAATA ATAATAATNA TAATNCGAGT TTAAAATCAN TTAAAGAGGC
NNCATTATTA CCACCNCCCC CATATTGAGA ATCACAAGTG CATTCAGTGG
TAATAATAAT GATAATGATG TATCGTTTAG ATNCACCGGT CATAAACAAA
AGG

Translated Amino Acid Sequence Contig-U11860-1

vgllgkk*rsyi**kithiykin*KKSDHTHNMRKAIKKNFIKFTGRLGFGSQKNNEIDE
NATDEQIISDEPIETIDQPIKLENGEFDQLIQSFKQYLSTCIIKENNNIDKNNESNSPQI
IIDEDYNDNYEILFDLXYFINGEFEPLDIHHXGNHHSHHHHHHSTTPNSSSLXVNKSSII
NSNEXXX---

---XXXXNIXNNNNNNNXNXSLKSXKEAXLLPPPPY*esqvhsvviimimmyrldxpvin
kr

Homology Contig-U11860-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11860-1 (Contig-U11860-1Q) /CSM_Contig/Conti...   543  e-155
Contig-U09327-1 (Contig-U09327-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U13077-1 (Contig-U13077-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U12803-1 (Contig-U12803-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U12084-1 (Contig-U12084-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U11109-1 (Contig-U11109-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U10968-1 (Contig-U10968-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U10406-1 (Contig-U10406-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U09287-1 (Contig-U09287-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U09569-1 (Contig-U09569-1Q) /CSM_Contig/Conti...    34  0.21

Homology Contig-U11860-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ368730) Dictyostelium discoideum cDNA clone:ddc47j24, 5' ...   444   0.0    4
(BJ383991) Dictyostelium discoideum cDNA clone:ddc47j24, 3' ...   224   4e-54  1
(AE014188) Plasmodium falciparum 3D7 chromosome 12, complete...    40   0.018  9
(AC196753) Citrus sinensis clone CSRBBa-031G04, WORKING DRAF...    42   0.035  5
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69...    34   0.092  7
(AL161779) Human DNA sequence from clone RP6-29D12 on chromo...    50   0.13   1
(AC210695) Pongo abelii chromosome 15 clone CH276-85F14, WOR...    50   0.13   1
(AC004390) Homo sapiens chromosome X clone bWXD96, *** SEQUE...    50   0.13   1
(AM489241) Vitis vinifera contig VV78X009681.5, whole genome...    40   0.15   4
(AM467544) Vitis vinifera contig VV78X190818.5, whole genome...    40   0.18   3

Homology Contig-U11860-1 vs Protein