Dictyostelium discoideum cDNA Contig-U11806-1

Assembled

Chromosomal Location of Contig-U11806-1

Sequence Contig-U11806-1

GTATTGATTA TACTGTTGAA AATATTTTAA AATCTGATTG CATTGGTGCA
TTAAAATCAT TAGTTGAAGA AAATAATTAT AAACCAACTA CCGATAATAT
TATTCAATCA ATCGAAGATG GTAGTTATAA AACATTTAAA TATATGATGA
ATCTTTTTGA AAATTCAAAT AATAATGAAA ATAATAATAA TAATAATAAA
AATAATAGTA ATAATAACAA TAAAAATAGT ATAGATAAAT TTAAATTACC
ATTCACAGAA AATGAATTTT GGAAATCAAT ATTTGGATAC TGTTTTAGAA
AACGTGCTAA ATTCATTAAC TTTATGATTA ACAGATACCA TATAAAACCA
GCAGCTGTGA CACCACTTAG ATTTGAAAAA ATTTCAAAAT TTTGTCCAAT
CCAAGAATCA TTACTTATTA AAGATTTAAT AAATATATGT GAATCTATGA
TTCATTTAAA AGTAAAACCA AAAGGTTTTT ATCAAAATAT TATTTTTAAA
AAATTAAAAA AGAAAGGTGA TAGTAAAAGT AAAAGTAAAA ATGATAGTAG
TAGTGATAGC GAAAGTGAAA GTGAAAGTGA AAGTGAAAGT GAAAGTGAAA
GTGAAAGTGA AAATGA---- ------NNNN NNNNNTACAA CTGAAACAAC
AACACCAACA ACACCAACAA CACCAACAAC AACACCAACA ACACCAACAA
CACCAACAAA AAAAACAACA ACAACCATAA CTGGTAACAA TCCAGATGTA
ATTTTAAATA ATGGCGATAA AATTTGTTTT GCAAATTATC TTAGATGTTT
ATTGGAAAAA GAAGCAACAA AGGGTCATAT TAGATTATTT AAAGCTTTGG
TTGATAATGG TTATAAATCA ATATTTTCAA AAAGATCAAA TGATTCAAAA
AGTATTTTCG ATCAAATTCA ATTACGTGAA ATACTCTATC GTGCTTTAAA
TAATAACCAT TTACAATTAT CTCTTTATCT TTTAGAGGAT TGTAATATTT
CAATCACTAA TACCCAATTT TATTCAAATG TTTCTAAAGG ATCTGCAACT
TTTTATGCTT TAAAAGATTT ATTTAAAAAT AATGAAATAA TTTAAATTTT
AAAAAATAAA TAAATAAACA AATAAATAAA TAAAATACTA TTAATAGGAT
TTAAAAAGTG AT

Translated Amino Acid Sequence Contig-U11806-1

IDYTVENILKSDCIGALKSLVEENNYKPTTDNIIQSIEDGSYKTFKYMMNLFENSNNNEN
NNNNNKNNSNNNNKNSIDKFKLPFTENEFWKSIFGYCFRKRAKFINFMINRYHIKPAAVT
PLRFEKISKFCPIQESLLIKDLINICESMIHLKVKPKGFYQNIIFKKLKKKGDSKSKSKN
DSSSDSESESESESESESESESENXXX---

---TTETTTPTTPTTPTTTPTTPTTPTKKTTTTITGNNPDVILNNGDKICFANYLRCLLE
KEATKGHIRLFKALVDNGYKSIFSKRSNDSKSIFDQIQLREILYRALNNNHLQLSLYLLE
DCNISITNTQFYSNVSKGSATFYALKDLFKNNEII*ilknk*ink*inkilligfkk*

Homology Contig-U11806-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11806-1 (Contig-U11806-1Q) /CSM_Contig/Conti...   704  0.0
Contig-U13582-1 (Contig-U13582-1Q) /CSM_Contig/Conti...    36  0.082
Contig-U12445-1 (Contig-U12445-1Q) /CSM_Contig/Conti...    36  0.082
Contig-U11786-1 (Contig-U11786-1Q) /CSM_Contig/Conti...    36  0.082
Contig-U11536-1 (Contig-U11536-1Q) /CSM_Contig/Conti...    36  0.082
Contig-U09541-1 (Contig-U09541-1Q) /CSM_Contig/Conti...    36  0.082
Contig-U06765-1 (Contig-U06765-1Q) /CSM_Contig/Conti...    36  0.082
Contig-U05306-1 (Contig-U05306-1Q) /CSM_Contig/Conti...    36  0.082
Contig-U03994-1 (Contig-U03994-1Q) /CSM_Contig/Conti...    36  0.082
Contig-U01741-1 (Contig-U01741-1Q) /CSM_Contig/Conti...    36  0.082

Homology Contig-U11806-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU053361) Dictyostelium discoideum slug cDNA, clone SLI462.      642   e-180  1
(BJ367011) Dictyostelium discoideum cDNA clone:ddc41d04, 5' ...   410   e-177  2
(BJ381284) Dictyostelium discoideum cDNA clone:ddc41d04, 3' ...   618   e-172  1
(EJ270369) 1095353007399 Global-Ocean-Sampling_GS-27-01-01-1...    40   0.010  3
(AC006871) Caenorhabditis elegans clone Y53G8X, *** SEQUENCI...    36   0.15   8
(AC006803) Caenorhabditis elegans clone Y53G8A, *** SEQUENCI...    36   0.15   8
(AM488460) Vitis vinifera contig VV78X046202.15, whole genom...    34   0.56   3
(AC122453) Mus musculus BAC clone RP24-258A18 from chromosom...    36   0.70   6
(AC202838) MACACA MULATTA BAC clone CH250-381I8 from chromos...    48   0.80   1
(DL209504) Full length cDNA.                                       48   0.80   1

Homology Contig-U11806-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


FJ214098_4(FJ214098|pid:none) Capnocytophaga canimorsus strain 5...    35   6.7